prot_E-fasciculatus_F_contig12340.1806.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12340.1806.1
Unique Nameprot_E-fasciculatus_F_contig12340.1806.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length137
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12340.1806.1 vs. uniprot
Match: D7FK51_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK51_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 2.390e-27
Identity = 75/98 (76.53%), Postives = 78/98 (79.59%), Query Frame = 0 
Query:   40 KTRIACFPAVEARVRALKSKPDDRGCLTVLRQLKHLQTAASEXXXXXXXXXXXXXXDPAAGRGGV-DAGVLGPKNGVRNVLNNVLTDGQIERILLEEL 136
            KTRIACFP+VEARVRALKSKPDDRG LTVLRQLKHLQTA+ E     XXXXXXXXX        V D G LGPKN V+NVLNNVLTD QIERILLEEL
Sbjct:  838 KTRIACFPSVEARVRALKSKPDDRGILTVLRQLKHLQTASEEGGKEVXXXXXXXXXXXXXXXXXVVDDGALGPKNDVKNVLNNVLTDAQIERILLEEL 935
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BLAST of mRNA_E-fasciculatus_F_contig12340.1806.1 vs. uniprot
Match: A0A6H5KVK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK7_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 3.950e-26
Identity = 73/96 (76.04%), Postives = 75/96 (78.12%), Query Frame = 0 
Query:   41 TRIACFPAVEARVRALKSKPDDRGCLTVLRQLKHLQTAASEXXXXXXXXXXXXXXDPAAGRGGVDAGVLGPKNGVRNVLNNVLTDGQIERILLEEL 136
            TRIACFP+VEARVRALKSKPDDRG LTVLRQLKHLQTA  E      XXXXXXXX        VD GVLGPKN V+NV NNVLTD QIERILLEEL
Sbjct:  988 TRIACFPSVEARVRALKSKPDDRGILTVLRQLKHLQTACEEGGKEFGXXXXXXXXXXXXXXV-VDDGVLGPKNEVKNVSNNVLTDAQIERILLEEL 1082
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12340.1806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FK51_ECTSI2.390e-2776.53Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KVK7_9PHAE3.950e-2676.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12340contigE-fasciculatus_F_contig12340:573..2225 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12340.1806.1mRNA_E-fasciculatus_F_contig12340.1806.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12340 107..2415 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12340.1806.1 ID=prot_E-fasciculatus_F_contig12340.1806.1|Name=mRNA_E-fasciculatus_F_contig12340.1806.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=137bp
MGQEQDLEVDSPPPPSKRYRNNSAGASCSSSSSSSSSSVKTRIACFPAVE
ARVRALKSKPDDRGCLTVLRQLKHLQTAASEEGGKEVGGGGSSSSDPAAG
RGGVDAGVLGPKNGVRNVLNNVLTDGQIERILLEEL*
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