prot_E-fasciculatus_F_contig12340.1807.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12340.1807.1
Unique Nameprot_E-fasciculatus_F_contig12340.1807.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length233
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12340.1807.1 vs. uniprot
Match: A0A6H5KVK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK7_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 5.920e-47
Identity = 141/235 (60.00%), Postives = 148/235 (62.98%), Query Frame = 0 
Query:    1 KRYPGNGGGRIGDGAGKDFTGVALNNAHQPQRRQXXXXXXXXXXXXXXXAVPATEEAMPPHPP--YPPHXXSSEYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGPATAGPSHGXXXXXXXXXXPGVAGRAVSDNAGCHGGAXXXXXXXTERAAAATAAVPEALRVSLVEALHQIAQLPFSAAELWSLHQHYFSPPLEHHPSPSSXXXXXXXXXXXXXXXTCPSKAGGPGRTW 233
            KR PG+GG RIGDGAGKDFTG ALNNAHQPQRRQ               A   TE+A+PPHPP  Y PH  S  +                              LG A  G  HGXXX       PGV+GRAVS +AGC GG        TERAAAA   VPEALR SLVEALHQIAQLPFSAAELWSLHQHYFSPPL+HHPSPSSXXXXXXXXXXXXXXX CPS AG PGRTW
Sbjct:  673 KRDPGDGGSRIGDGAGKDFTGGALNNAHQPQRRQQCMGGGSPT------AAVVTEKAIPPHPPSEYRPHHLSRYH-----------QHQGDHQQNANPPGVREAALGAAATG-HHGXXXGGRHH--PGVSGRAVSADAGCQGGVGSSGGDGTERAAAA---VPEALRASLVEALHQIAQLPFSAAELWSLHQHYFSPPLDHHPSPSSXXXXXXXXXXXXXXX-CPSNAG-PGRTW 882
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BLAST of mRNA_E-fasciculatus_F_contig12340.1807.1 vs. uniprot
Match: D7FK51_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK51_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 5.850e-26
Identity = 75/109 (68.81%), Postives = 78/109 (71.56%), Query Frame = 0 
Query:  125 PGVAGRAVSDNAGCHGGAXXXXXXXTERAAAATAAVPEALRVSLVEALHQIAQLPFSAAELWSLHQHYFSPPLEHHPSPSSXXXXXXXXXXXXXXXTCPSKAGGPGRTW 233
            PGV  RAVS++AGC GG  XXXXXX        A VPEALR SLVEALHQIAQLPFSAAELWSLHQHYFSPPL+HHPSPSS               TCPSKAG PGRTW
Sbjct:  629 PGVPRRAVSEDAGCRGGVGXXXXXXXXXXXXXXA-VPEALRASLVEALHQIAQLPFSAAELWSLHQHYFSPPLDHHPSPSSRSSPTSAASTPSPS-TCPSKAG-PGRTW 734
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12340.1807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVK7_9PHAE5.920e-4760.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK51_ECTSI5.850e-2668.81Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12340contigE-fasciculatus_F_contig12340:2466..3572 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12340.1807.1mRNA_E-fasciculatus_F_contig12340.1807.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12340 2466..3572 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12340.1807.1 ID=prot_E-fasciculatus_F_contig12340.1807.1|Name=mRNA_E-fasciculatus_F_contig12340.1807.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=233bp
KRYPGNGGGRIGDGAGKDFTGVALNNAHQPQRRQQQCMGGGRGPTTTTAA
VPATEEAMPPHPPYPPHPPSSEYGPHHQSRYHQSHHASGHQQNAYPPGAR
EGALGPATAGPSHGGGGSGGRHHHPGVAGRAVSDNAGCHGGASSGGGSGT
ERAAAATAAVPEALRVSLVEALHQIAQLPFSAAELWSLHQHYFSPPLEHH
PSPSSHSSPTSAASTPSPSSTCPSKAGGPGRTW
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