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Homology
BLAST of mRNA_E-fasciculatus_F_contig1234.1805.1 vs. uniprot
Match: D7FTZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ1_ECTSI) HSP 1 Score: 510 bits (1313), Expect = 1.480e-175 Identity = 260/300 (86.67%), Postives = 274/300 (91.33%), Query Frame = 1
Query: 43 AGLGAMRLSRCRLLYLCCGITTTVGLLAALLRPSTVTTDYVVSAVPKRSPSSRISAGVHVEFDAFEAADPAASAAAVAAIDSATPELLQELYRLARDDVQGILGDDDGAKACINWRKRPHQGCTDPSQCGKGWLFRRKGLLLAVVFSAGGDGSEDRSGATTAVQTSSGTAGSGGPTDWIHVAEGGDRREGLSPHEWRAGTAGVVTVVGLRDGADGELSDCKSRDLSMLLRLQGPEALAEAAMPVSGRCAWTVRFQPTLEGVYTLDATLLDWRGGLEAHQSMCNEVAGQYGEGSVEMDAVR 942
AGL AMRLSRCRLLYLCCGI TVGL A LLRPSTVT +Y SA K SPSSRI AG+HVE DA EAADPAASAAAVAAIDSA+P+LLQELYRLARDDV GILGDDDGAKAC+NWRK+P+QGCTDPSQCGKGWLFRRKGLLLAV+F+AGGD ED S ATTAVQTSSGTAGSG PTDWIHVAEGGDRREGLSPHEW AGT G++TVVGLR+GADGELSDC SRDLSMLLRLQGPEALAEAAMPV+GRCAWTV FQPTLEGVYTLD TLLDWRGGLEAHQS+C EVAGQYGEGSVEMDAVR
Sbjct: 24 AGLSAMRLSRCRLLYLCCGIAVTVGLFATLLRPSTVT-EYA-SAAAKLSPSSRIPAGMHVELDALEAADPAASAAAVAAIDSASPKLLQELYRLARDDVLGILGDDDGAKACVNWRKKPNQGCTDPSQCGKGWLFRRKGLLLAVMFTAGGDDGEDPSVATTAVQTSSGTAGSGAPTDWIHVAEGGDRREGLSPHEWSAGTPGMMTVVGLREGADGELSDCNSRDLSMLLRLQGPEALAEAAMPVAGRCAWTVLFQPTLEGVYTLDVTLLDWRGGLEAHQSLCTEVAGQYGEGSVEMDAVR 321
BLAST of mRNA_E-fasciculatus_F_contig1234.1805.1 vs. uniprot
Match: A0A6H5KGQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGQ9_9PHAE) HSP 1 Score: 192 bits (488), Expect = 1.850e-52 Identity = 109/217 (50.23%), Postives = 129/217 (59.45%), Query Frame = 1
Query: 292 TPELLQELYRLARDDVQGILGDDDGAKACINWRKRP-HQGCTDPSQCGKGWLFRRKGLLLAVVFSAGGDGSEDRSGATTAVQTSSGTAGSGGPTDWIHVAEGGDRREGLSPHEWRAGTAGVVTVVGLRDGADGELSDCKSRDLSMLLRLQGPEALAEAAMPVSGRCAWTVRFQPTLEGVYTLDATLLDWRGGLEAHQSMCNEVAGQYGEGSVEMDAV 939
T +QEL+R ARDDV GIL + NWRK +QGCT QCGKGWLF ++ LLL + AG D S AT EW A + VTVVGL+ +GE SDC S++LS+L+RLQGPEALAEAA PV GRCAWTV F P+LEGVYT DAT+L+W GGL+ H MC+EVAGQY EGSVEM +V
Sbjct: 43 TSNAMQELHRQARDDVLGILAAPADSCLTSNWRKTSANQGCTAADQCGKGWLFHQQDLLLVTQW-AGSDASSVGDDATD---------------------------------EWCARESRTVTVVGLKAQGEGEESDCNSQNLSILVRLQGPEALAEAATPVDGRCAWTVEFTPSLEGVYTFDATVLNWEGGLDPHPEMCHEVAGQYPEGSVEMGSV 225
BLAST of mRNA_E-fasciculatus_F_contig1234.1805.1 vs. uniprot
Match: D7G564_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G564_ECTSI) HSP 1 Score: 76.3 bits (186), Expect = 1.020e-11 Identity = 47/105 (44.76%), Postives = 57/105 (54.29%), Query Frame = 1
Query: 625 EWRAGTAGVVTVVGLRDGADGELSDCKSRDLSMLLRLQGPEALAEAAMPVSGRCAWTVRFQPTLEGVYTLDATLLDWRGGLEAHQSMCNEVAGQYGEGSVEMDAV 939
EW A + VT+VGL+ +GE SDC S++LS+L+RLQGPEALAEAA PV GRC +EVAGQY EGSVEM +V
Sbjct: 86 EWCARESRTVTMVGLKAQGEGEESDCNSQNLSILVRLQGPEALAEAATPVEGRC----------------------------------HEVAGQYPEGSVEMGSV 156
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 90.9 |
| Seed ortholog evalue | 1.1e-15 |
| Seed eggNOG ortholog | 2880.D7G564 |
| EggNOG OGs | 2EYHI@1,2T00I@2759 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | signal anchor |
| Exons | 6 |
| Model size | 942 |
| Cds size | 942 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1234.1805.1 >prot_E-fasciculatus_F_contig1234.1805.1 ID=prot_E-fasciculatus_F_contig1234.1805.1|Name=mRNA_E-fasciculatus_F_contig1234.1805.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=314bp
AESRNRDSTASWLAAGLGAMRLSRCRLLYLCCGITTTVGLLAALLRPSTV TTDYVVSAVPKRSPSSRISAGVHVEFDAFEAADPAASAAAVAAIDSATPE LLQELYRLARDDVQGILGDDDGAKACINWRKRPHQGCTDPSQCGKGWLFR RKGLLLAVVFSAGGDGSEDRSGATTAVQTSSGTAGSGGPTDWIHVAEGGD RREGLSPHEWRAGTAGVVTVVGLRDGADGELSDCKSRDLSMLLRLQGPEA LAEAAMPVSGRCAWTVRFQPTLEGVYTLDATLLDWRGGLEAHQSMCNEVA GQYGEGSVEMDAVR back to topmRNA from alignment at E-fasciculatus_F_contig1234:573..5165- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig1234.1805.1 ID=mRNA_E-fasciculatus_F_contig1234.1805.1|Name=mRNA_E-fasciculatus_F_contig1234.1805.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4593bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1234:573..5165- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female) GCCGAGAGTCGCAACAGAGACAGCACGGCGTCTTGGCTTGCTGGTGATGG
GCATTGGAGTTCTGGTGAGATAGTTGAAGCAGTGCTTGCGATGGATACGG
CCTGCAGGTACTCCCTGTGTTGCAGCCGCTGGATCCTTTTGAGATATTTC
ACCGCCCTCGCTGTCCGATCTTCTCCTTTTTTTGCCGTCTGATCAAGTCT
GACCCCGCTCTCTCCGTGCCTGCTGTCAGCAGGCTTGGGTGCGATGAGGT
TATCACGATGCCGACTGCTGTACCTGTGCTGCGGGATCACCACCACCGTC
GGTCTACTTGCCGCGTTGCTACGGCCAAGCACCGTGACGACAGACTACGT
AGTATCTGCTGTGCCGAAGAGGTCGCCCTCCTCGCGAATCTCCGCCGGCG
TTCATGTTGAATTCGACGCCTTTGAGGCCGCCGACCCTGCCGCTTCTGCT
GCCGCCGTGGCAGCCATCGATTCAGCCACCCCGGAACTTTTGCAGGTGTG
AATGCTGCGGGGTTGGGGTCTTTCGTTGCACCTGTCTACCCTGTCGTAGG
CTTGCTTGCATCCGAGCGAGGAGGAAGTGCGGTAAAGTAACATGCACAGC
AGCATGGTCCTGTACAAAAGTTCGTTTCCCTCGCAAGTTTGTGCCGGAAA
ATACTCCGGTCACCTGGGGACAGGCAGGCCCGAAGATAGCGGAGCTCTCT
CTATTTGTACGGCAGCCGCAGTTTGCTCCATCACACAACAACACAACATA
ACCCATGAACCAAACGACCAGCGCCAAAACACTTAGTGGCCGCCGTTTGT
GCCCACGTGCAACCTACGGAGTGTAAACACAAACAATTTCGTTTCGAGAA
GCGCGTCGGTGCGTTTCGCTCAAACATTAGATCGAAAGACCGTCGTAAGG
TTGATGTAAGATAGATAGATAGCGTTGATCGATCACTCCCTCCAACACCC
CGCAATAAATTTCAATCCCGGCGATTCCGCCGCGTTGTTTTTGCGTTGGT
GTTTCTGCACAATCAACATCCAGGAGAAGTTTTCCAAAGTCTTGATTCCA
GTGCTGTACGAGACTACAATCTCAATGTTAGTATCTGAGATGGTAGCCCT
TGCCACATACTAAAGATTTGCGGTCCGCGATTTTCCAAACGATCCTTTTA
TGCATATCATCGACATCGGTGAGCTACAAGCAGGGTTTGAAGTCGCTGTG
CGGTTTGATTTTGAAACGCTTCAAGCACCTTTGCGGCTAGACCTGCATAT
ATATGACCCCAGGTATTCACGACAATGGCGACGAGCTGGATATGCGAGGG
AAGAGCTGCGCTGAAGTTCGCGGCCCCACACACTCACATAGGCGGTGATC
CGCGGTCCCTACTACTGTGTGCTTGAAGCGCTTCATGATCGGACCGCACA
CCAGCTTAAGAAATCCTGCCTGTAGCTCACCCGTCTCGATGATACAAGGA
TCGTTTGGAAAATCACAGACCGCCGATCTGTAGTGTATCGCAAGGGCCAC
AATCTCTGATACTAACATTGCACCAATTGCACACGAGGGGGGGTCAGCGG
ACGGCTAATTTGCGATTTTAGATTCGTTCTGGAGTCAGACTTTGGAATAC
CAAGATGTCCAGGCGTTTCCTGCCGTTTCCTGGATTTTTAGGAGGATGTA
TTGCGTACTCCCCCGCGTCCTTAAAAAACTCTGTAATTGCGGTATTTTTG
GAATCATTGTCTGCAGGTACAGAGGAGTGCTTTGGTGTTTAGTGTGTTCG
CTGGATGTAAGCAAGAAAACACAGTCCGGTTCTGCGCGCATCCTGAACCA
GGTTCTGCTTGCCCACCCGCGCGCTCTCCCCGGTATTCGGCGTTCGCGTT
CTACGTTTATGGGGGGGGCGCGGGGGGGGGGTTCTGACACGTGTATTGCC
TTTTCGATCCCTCCTTCGCCGCCATCTTCTTCTTCTTTCCAGGAGCTGTA
TCGCCTGGCGCGAGATGACGTGCAGGGGATACTTGGCGATGACGATGGGG
CGAAGGCGTGCATCAACTGGAGAAAGAGGCCTCACCAGGGCTGCACCGAC
CCCAGCCAGTGCGGAAAAGGTGGCCGTCTTTTTCCCTGCCCGGTGCACTT
GTGTAGCCTTTGCTTCTGGAGTTTCGCGTGCACCATGAAAGTGTGAGCGC
GAGCCAAACGTGTGCATCCGTCGGCGTGAATCTTAGGTTGCGGCTGGTCT
GCGGTGTGGAACAGCAGCAAGAGAGCGCGTGGCGCATCCCGACCGTTTGT
TGGAGCGGTGCCATCACGCAGAAACAGCGTATAACTTACAGCGACGATCA
AGCACCACAACTGCTTTCGACTACTTCGTACTTCCGCTGTTCGTCCTACT
CGTGTTGGCATGCCTTGGTTGTTTGCCGGAGTCTTCGCGTGCCCGAGACC
CATCCTGAACCTCAACAGCAGTAATCCACCAGCCATCGACGAGAAAACGT
AAACGAAGGGCTATTACCAGAAGATACCCTTGTACCCTAGCACGGCAAAA
CCAAATGCGCGACAAAACTTGGCCTCTGTCCGCGAAGCAGACGAGCAGCA
GCCAGTCCTAAGGATGGCAGCGATAGTAGTGGTGTTGGCGATGATTGGTA
AAGAAAATATTGAAATTCATGCCTGTGCGGTACACACCCGCGACGACACA
ATTGCCGGTGCAGGGTGGCTGTTCCGGCGAAAGGGCTTGCTGCTAGCCGT
GGTCTTCAGCGCGGGGGGCGACGGCAGCGAAGACCGCTCAGGTGCAACAA
CAGCGGTCCAAACAAGCAGCGGCACCGCGGGGAGCGGGGGTCCCACAGAT
TGGATCCACGTCGCGGAAGGGGGAGATAGGCGGGAAGGACTCTCGCCGCA
TGAATGGCGCGCGGGAACGGCCGGGGTGGTGACCGTGGTGGGGTTGAGGG
ACGGGGCGGACGGAGAGCTGTCGGACTGCAAGAGCCGAGACCTCAGCATG
CTGCTGAGACTGCAAGGCCCCGAAGCCTTGGCGGAGGTACTTGATCTAAG
GTTGACACTGCTACTGCTGGTAGTCGCTGTTTCAATTCTAGTAAGTATGA
CGAACATTGTTGAGCTGTTACTTTTGGTCCAGGTTTGCCGATACAAGCGT
GATCCACGACCGTACAGGTATGAGTGATGACACACGTGGTGGCGTCTTTG
AAACTGCCGGGCATTGTTTTCCTCCGCTTCCCTCACAGCAGAATCGCAGA
CACTGATAAAATCTCTTTTCACAAGTTCTTCGCGTGACCGCGGAAGTTTG
AAGAAGCGTAGGCAAGAGGAGGTATGTACGCGGTAAAAATTACTTCTTGT
TACATTGTGAAGATTGCATCTGCACGAGCGGCATGAATTTGCTTGTTACT
GTTGCCTCTAACTTGTGCTGCAACTCCGTGGATGATTTTTGGCTGCTGCC
TCGTGACGTGCCTCCGATGAATACGACTGGTTGATTGGTCGGCGGCAAAG
GCCGCGATGCCTGTGTCGGGAAGGTGTGCGTGGACCGTGCGGTTCCAGCC
CACTCTGGAGGGCGTCTACACACTGGACGCGACGCTGCTCGACTGGAGAG
GCGGGCTCGAGGCGCACCAGTCAATGTGAGCGTGACATGGCGTCACTGCT
GCTGCTGCTGCTGCTGCTGCTGTCGTTGTTGTTTTCTGTTTGGGTGACGA
AATTCACGGCCCGTTGCTTGCGCGGACAGCTTTAGTTTGTCCTGTGCCCG
ACGCAGATTTTTCCATCTTCTTCTCGGGGGGTGGAACCCCGCCGGACGCC
CCCCCCCAGGGATGCTCCTGAAATGACGTGACTGGTGTTGTTTGCTGGTT
GCGCACTGGGAGCAGACCACTCAATGCCTAAACTCACGCTTTCAACACGC
GAAATGTTAGCCAAGTGTACACTCAACCGTCGATTCGGTGGAACTTGGGC
AGTTTCTCCAGAGGCGGAAGTCGGCAGCGTTGCAGCGACGCCCTCTGTTT
GGGGGCGAACCGTGACGGAGACTCCGATATCACGAGATACACATCACGTG
CAGAACATGAACAGGGCGCCGGTTTTTGTCAGAGAGCATGACAGCTCTGC
GGCAGTTGGCTTTGCTCTTAGCTGGTGCTTGCACTTCTCACTCCGTCCAA
TACCAGCACGTGTCAGCCTCCAAACAGGCACGCTTGCCGTACGCGCATGA
TGCCGCTTCTCCGCTTTTAGAGGGTGATACATACAAGGCCGAAAAGCTTC
GGATAGTAGTGAAATAATCAAAACACATCTCGGCAACCGTGACGTCCCTC
CCTGTTGCAAATAGAAAGCTCGGCAATGCAGTTTTCCTTACGCCTGCACC
GCCCCAACCCCTACAACACGCGCAAGAGACGCCCACAAGTGCAAACCCAT
GTTTGCGCGGCGGTTGGGTGGGTATCATCGCGTACCCTGCATCTACTACC
TCTACCTCTGTTTTCGTGCTTCGATATTGTTGCGAAGAATGGAAAGTCTC
AAATATTGTAACTTGAAGCAACCGAATCGCTCCGCGCGGATACATGTGTT
GTAAGCATCTTCCTTCGCGTCGTTTGTTGTGGCAGGTGCAATGAGGTGGC
CGGTCAGTACGGCGAGGGTTCCGTGGAGATGGACGCTGTCAGG back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig1234:573..5165- >mRNA_E-fasciculatus_F_contig1234.1805.1 ID=mRNA_E-fasciculatus_F_contig1234.1805.1|Name=mRNA_E-fasciculatus_F_contig1234.1805.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1884bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1234:573..5165- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female) GCCGAGAGTCGCAACAGAGACAGCACGGCGTCTTGGCTTGCTGGCCGAGA GTCGCAACAGAGACAGCACGGCGTCTTGGCTTGCTGCAGGCTTGGGTGCG ATGAGGTTATCACGATGCCGACTGCTGTACCTGTGCTGCGGGATCACCAC CACCGTCGGTCTACTTGCCGCGTTGCTACGGCCAAGCACCGTGACGACAG ACTACGTAGTATCTGCTGTGCCGAAGAGGTCGCCCTCCTCGCGAATCTCC GCCGGCGTTCATGTTGAATTCGACGCCTTTGAGGCCGCCGACCCTGCCGC TTCTGCTGCCGCCGTGGCAGCCATCGATTCAGCCACCCCGGAACTTTTGC AGCAGGCTTGGGTGCGATGAGGTTATCACGATGCCGACTGCTGTACCTGT GCTGCGGGATCACCACCACCGTCGGTCTACTTGCCGCGTTGCTACGGCCA AGCACCGTGACGACAGACTACGTAGTATCTGCTGTGCCGAAGAGGTCGCC CTCCTCGCGAATCTCCGCCGGCGTTCATGTTGAATTCGACGCCTTTGAGG CCGCCGACCCTGCCGCTTCTGCTGCCGCCGTGGCAGCCATCGATTCAGCC ACCCCGGAACTTTTGCAGGAGCTGTATCGCCTGGCGCGAGATGACGTGCA GGGGATACTTGGCGATGACGATGGGGCGAAGGCGTGCATCAACTGGAGAA AGAGGCCTCACCAGGGCTGCACCGACCCCAGCCAGTGCGGAAAAGGAGCT GTATCGCCTGGCGCGAGATGACGTGCAGGGGATACTTGGCGATGACGATG GGGCGAAGGCGTGCATCAACTGGAGAAAGAGGCCTCACCAGGGCTGCACC GACCCCAGCCAGTGCGGAAAAGGGTGGCTGTTCCGGCGAAAGGGCTTGCT GCTAGCCGTGGTCTTCAGCGCGGGGGGCGACGGCAGCGAAGACCGCTCAG GTGCAACAACAGCGGTCCAAACAAGCAGCGGCACCGCGGGGAGCGGGGGT CCCACAGATTGGATCCACGTCGCGGAAGGGGGAGATAGGCGGGAAGGACT CTCGCCGCATGAATGGCGCGCGGGAACGGCCGGGGTGGTGACCGTGGTGG GGTTGAGGGACGGGGCGGACGGAGAGCTGTCGGACTGCAAGAGCCGAGAC CTCAGCATGCTGCTGAGACTGCAAGGCCCCGAAGCCTTGGCGGAGGGTGG CTGTTCCGGCGAAAGGGCTTGCTGCTAGCCGTGGTCTTCAGCGCGGGGGG CGACGGCAGCGAAGACCGCTCAGGTGCAACAACAGCGGTCCAAACAAGCA GCGGCACCGCGGGGAGCGGGGGTCCCACAGATTGGATCCACGTCGCGGAA GGGGGAGATAGGCGGGAAGGACTCTCGCCGCATGAATGGCGCGCGGGAAC GGCCGGGGTGGTGACCGTGGTGGGGTTGAGGGACGGGGCGGACGGAGAGC TGTCGGACTGCAAGAGCCGAGACCTCAGCATGCTGCTGAGACTGCAAGGC CCCGAAGCCTTGGCGGAGGCCGCGATGCCTGTGTCGGGAAGGTGTGCGTG GACCGTGCGGTTCCAGCCCACTCTGGAGGGCGTCTACACACTGGACGCGA CGCTGCTCGACTGGAGAGGCGGGCTCGAGGCGCACCAGTCAATGCCGCGA TGCCTGTGTCGGGAAGGTGTGCGTGGACCGTGCGGTTCCAGCCCACTCTG GAGGGCGTCTACACACTGGACGCGACGCTGCTCGACTGGAGAGGCGGGCT CGAGGCGCACCAGTCAATGTGCAATGAGGTGGCCGGTCAGTACGGCGAGG GTTCCGTGGAGATGGACGCTGTCAGGGTGCAATGAGGTGGCCGGTCAGTA CGGCGAGGGTTCCGTGGAGATGGACGCTGTCAGG back to top
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