prot_E-fasciculatus_F_contig12336.1802.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12336.1802.1
Unique Nameprot_E-fasciculatus_F_contig12336.1802.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length117
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12336.1802.1 vs. uniprot
Match: D7FPC4_ECTSI (Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC4_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 5.780e-54
Identity = 102/117 (87.18%), Postives = 105/117 (89.74%), Query Frame = 0 
Query:    1 MASGLGGHEHGGRGGEDRVQDILSMCPAAMGSGLQVALTETEGSARLRTRAVATIKGLLQQVKANIKNPDRSLCSDLQRMAELRPKVFREPELLEAVGEVLTGKGAKTAIQSSGGRE 117
            MAS LG HE GGRG E+RVQDILSMCPA MGSGLQ AL ETE S  LRT+AV TIKGLLQQVK NIKNPDRSLCSDLQRMAELRPKVFREPELLE+VGEVLTGKGAKTAIQSSGGRE
Sbjct:    1 MASVLG-HEQGGRGSENRVQDILSMCPATMGSGLQAALNETEDSGVLRTKAVDTIKGLLQQVKENIKNPDRSLCSDLQRMAELRPKVFREPELLESVGEVLTGKGAKTAIQSSGGRE 116
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BLAST of mRNA_E-fasciculatus_F_contig12336.1802.1 vs. uniprot
Match: A0A6H5L4I3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I3_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.470e-24
Identity = 54/60 (90.00%), Postives = 57/60 (95.00%), Query Frame = 0 
Query:   58 LLQQVKANIKNPDRSLCSDLQRMAELRPKVFREPELLEAVGEVLTGKGAKTAIQSSGGRE 117
            L+  V ANI+NPDRSLCSDLQRMAELRPKVFREPELLEAVGEVLTGKGAKTAIQSSGG+E
Sbjct:   16 LVVAVPANIQNPDRSLCSDLQRMAELRPKVFREPELLEAVGEVLTGKGAKTAIQSSGGQE 75
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12336.1802.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPC4_ECTSI5.780e-5487.18Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus ... [more]
A0A6H5L4I3_9PHAE1.470e-2490.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12336contigE-fasciculatus_F_contig12336:432..1316 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12336.1802.1mRNA_E-fasciculatus_F_contig12336.1802.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12336 432..1450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12336.1802.1 ID=prot_E-fasciculatus_F_contig12336.1802.1|Name=mRNA_E-fasciculatus_F_contig12336.1802.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=117bp
MASGLGGHEHGGRGGEDRVQDILSMCPAAMGSGLQVALTETEGSARLRTR
AVATIKGLLQQVKANIKNPDRSLCSDLQRMAELRPKVFREPELLEAVGEV
LTGKGAKTAIQSSGGRE
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