mRNA_E-fasciculatus_F_contig12335.1801.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12335.1801.1 vs. uniprot
Match: D7FUZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ2_ECTSI) HSP 1 Score: 400 bits (1027), Expect = 1.130e-136 Identity = 266/286 (93.01%), Postives = 269/286 (94.06%), Query Frame = 1
Query: 1 QVAHSELAKERAGAEEAVARASKAERELDQARARAAVLDNKLATLEKDKLELLADANSSRARASALEEKYSAARVAEAAESEXXXXXXXXXXASLESENREAXXXXXXXXXXXXXXXXXADKAVKTEEETRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEVIVTKYADLKVKMATMEAEKDGAADLVDEWQSNSNGERGEGGRKVSQAAKRALRENTELHGRVAAMTESLQMRAHQLEGQRQSNEFLLKRVEELEQQVATTSGKTAIGTD 858
+VAHSELAKERAGAEEA ARASKAERELDQARARAAVLDNKLATLEKDKLELLADANSSRARASALEEKYSAAR AEA ESEXXXXXXXXXX XXXXXXXXXXXXXXXX ADKAVK EE+TRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIE IVTKYADLKVKMATMEAEKDGAADLVDEWQSNS GERGEGGRKVS+AAKRALRENTELHGRVAAMTESLQMRAHQLEGQRQSNEFLLKRVEELEQQVATTSGKTAIGTD
Sbjct: 96 EVAHSELAKERAGAEEAAARASKAERELDQARARAAVLDNKLATLEKDKLELLADANSSRARASALEEKYSAARAAEAVESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADKAVKMEEDTRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEAIVTKYADLKVKMATMEAEKDGAADLVDEWQSNSKGERGEGGRKVSEAAKRALRENTELHGRVAAMTESLQMRAHQLEGQRQSNEFLLKRVEELEQQVATTSGKTAIGTD 381
BLAST of mRNA_E-fasciculatus_F_contig12335.1801.1 vs. uniprot
Match: A0A6H5JZQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ7_9PHAE) HSP 1 Score: 406 bits (1043), Expect = 8.550e-129 Identity = 268/285 (94.04%), Postives = 272/285 (95.44%), Query Frame = 1
Query: 4 VAHSELAKERAGAEEAVARASKAERELDQARARAAVLDNKLATLEKDKLELLADANSSRARASALEEKYSAARVAEAAESEXXXXXXXXXXASLESENREAXXXXXXXXXXXXXXXXXADKAVKTEEETRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEVIVTKYADLKVKMATMEAEKDGAADLVDEWQSNSNGERGEGGRKVSQAAKRALRENTELHGRVAAMTESLQMRAHQLEGQRQSNEFLLKRVEELEQQVATTSGKTAIGTD 858
VAHSELAKERAGAEEAVARASKAERELDQARARAAVL+NKLATLEKDKLELLADANSSRARASALEEKYSAAR AEAAES XXXXXXXXXX SEN +A XXXXXXXXXXXXXXX ADKAVK EE+TRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIE IVTKYADLKVKMA MEAEKDGAADLVDEWQSNS GERGEGGRKVS+AAKRALRENTELHGRVAAMTESLQMRAHQLEGQRQSNEFLLKRVEELEQQVATTSGKTAIGTD
Sbjct: 1056 VAHSELAKERAGAEEAVARASKAERELDQARARAAVLENKLATLEKDKLELLADANSSRARASALEEKYSAARAAEAAESXXXXXXXXXXXXXXXSENLKAVXXXXXXXXXXXXXXXRADKAVKMEEDTRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEAIVTKYADLKVKMAAMEAEKDGAADLVDEWQSNSKGERGEGGRKVSEAAKRALRENTELHGRVAAMTESLQMRAHQLEGQRQSNEFLLKRVEELEQQVATTSGKTAIGTD 1340
BLAST of mRNA_E-fasciculatus_F_contig12335.1801.1 vs. uniprot
Match: A0A8K1CQM6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQM6_PYTOL) HSP 1 Score: 55.1 bits (131), Expect = 8.090e-5 Identity = 39/144 (27.08%), Postives = 81/144 (56.25%), Query Frame = 1
Query: 382 EETRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEVIVTKYADLKVKMATMEAEKDGAADLVDEWQSNSNG---ERGEGGRKVSQAAKRALRENTELHGRVAAMTESLQMRAHQLEGQRQSNEFLLKRVE 804
E +++ + K +E + L +RN+ +SR+ LAK++ R+ G R++D++E + + +L ++A +AE A D + E++ +G ++G+G + + RA+ +N EL V +TESL Q+ ++ N L+ +++
Sbjct: 819 EASQSRLMSKEQENLVLVGERNALRSRSQELAKEMKRIVGAHRSIDEVEAQLAERKELITQLAVAKAEAKRAVDEMQEYKDALDGMMKQQGQGDK--TNRPLRAMSQNLELQRLVHQLTESLNESKEQMSAMKKINGALMTKLQ 960 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12335.1801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12335.1801.1 >prot_E-fasciculatus_F_contig12335.1801.1 ID=prot_E-fasciculatus_F_contig12335.1801.1|Name=mRNA_E-fasciculatus_F_contig12335.1801.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=287bp QVAHSELAKERAGAEEAVARASKAERELDQARARAAVLDNKLATLEKDKLback to top mRNA from alignment at E-fasciculatus_F_contig12335:367..3807- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12335.1801.1 ID=mRNA_E-fasciculatus_F_contig12335.1801.1|Name=mRNA_E-fasciculatus_F_contig12335.1801.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3441bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12335:367..3807- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12335:367..3807- >mRNA_E-fasciculatus_F_contig12335.1801.1 ID=mRNA_E-fasciculatus_F_contig12335.1801.1|Name=mRNA_E-fasciculatus_F_contig12335.1801.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1722bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12335:367..3807- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |