mRNA_E-fasciculatus_F_contig12333.1800.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12333.1800.1
Unique NamemRNA_E-fasciculatus_F_contig12333.1800.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: A0A6H5JK59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK59_9PHAE)

HSP 1 Score: 741 bits (1913), Expect = 8.730e-255
Identity = 483/556 (86.87%), Postives = 491/556 (88.31%), Query Frame = 1
Query:    4 QRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGS-----AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMTPTMESPRAEWEPSDVSEKRTGLGGRSVMTVG----------------------ADGESEAAGG-DRSSDWGGWRRTRGGWCSATRDDD-GPHDRDDEGRGSGGGG--SPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGSKKEAD--KSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRRKRPGSSWAPGTQAQSMRPPGAGAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSITAATNGSTP-MAAAIGGTIGGAETVGEPQAKLSIG 1569
            QRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGS     A  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  MTPTMESPRAEWEPSDVSEKRTGLGGRSV T+G                      ADGESEAAGG DRSSDWGGWRRTRGGWCSATRDDD GPHDRD EGR S      +PGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCG KKEA   KSTSLLHAPEILMLHVKRFRRGY WSHKVHNRV+FPLHDLDVSRWLSDHALESSV QQRA GTSGGDAHRKS+VRRG      XXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYIL+YRRKRP SSWAPGTQAQSMRP   GAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPS+TAATNGSTP  AAA+G TIG AE VGEPQ +LSIG
Sbjct:  261 QRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSVSATAAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAMTPTMESPRAEWEPSDVSEKRTGLGGRSVTTLGLGGGAADEGXXXXXXXXXXXXGADGESEAAGGGDRSSDWGGWRRTRGGWCSATRDDDDGPHDRDHEGRASXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTSLLHAPEILMLHVKRFRRGYFWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRAPGTSGGDAHRKSSVRRGCASPDGXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRKRPSSSWAPGTQAQSMRP---GAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSMTAATNGSTPGAAAAVGATIG-AEAVGEPQPRLSIG 812          
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: D8LS72_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS72_ECTSI)

HSP 1 Score: 700 bits (1807), Expect = 3.730e-242
Identity = 466/530 (87.92%), Postives = 479/530 (90.38%), Query Frame = 1
Query:    4 QRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--MTPTMESPRAEWEPSDVSEKRTGLGGRSVMTVGADGESEAAGGDRSSDWGGWRRTRGGWCSATRDDD-GPHDRDDEGRGSGGGG----SPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRRKRPGSSWAPGTQAQSMRPPGAGAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSITAATNGSTP-MAAAIGGTIGGAETVGEPQAKLSIG 1569
            QRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG  MTPT+ESPRAEWEPSD         G++     A G     GGDRSSDWGGWRRTRGGWCSATRDDD GPHDR+              +PGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCG KKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRV+FPLHDLDVSRWLSDHALESSV QQRASGTSGGDAHRKS+VRR XXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATW+HFNDTITTKVSQ+TVSSASPYIL+YRRKRP SSW PGTQAQSMRP   GAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPS+ AATNGSTP  AAA+GGTIG AE VGEPQ +LSIG
Sbjct:  299 QRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEMTPTVESPRAEWEPSDDQHH-----GKAYAADQAPG-----GGDRSSDWGGWRRTRGGWCSATRDDDDGPHDREXXXXXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWYHFNDTITTKVSQDTVSSASPYILVYRRKRPSSSWGPGTQAQSMRP---GAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSMNAATNGSTPGAAAAVGGTIG-AEAVGEPQPRLSIG 814          
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: A0A7S2RQP1_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RQP1_9STRA)

HSP 1 Score: 114 bits (286), Expect = 3.970e-23
Identity = 74/240 (30.83%), Postives = 118/240 (49.17%), Query Frame = 1
Query:  541 GGSPGYFGGLVSSLGVWLGFKS--VALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGY----LWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAP--VLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRRKR 1236
            GGS G   G+  ++   +G +S  ++L +CL  FF+PE+L+G  QY+C+ C SK++A+KS S  H PE+L L++KRF R      L S+K    V +PL +LD    LSD   +    QQ  +   GG  +                                  + + SP S      LYDL  +V H+GG+  GHY +Y ++  +  W+ ++D I + + +  V S   Y+L YR+++
Sbjct:  371 GGSSGSLWGVFKNIKTMIGLESQVLSLRECLQGFFAPEQLQGDEQYYCEKCKSKQDAEKSHSFAHLPEVLCLNLKRFNRNLGGWSLNSYKNMTSVTYPLRNLD----LSDFFYDKYGSQQEEASLLGGAFNVDGLT---------------------VNNTHAQESTSSSPESREDDRTLYDLFAVVRHSGGINGGHYIAYCKNPINLKWYEYDDDICSVIPENKVQSDDAYLLFYRKQK 585          
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: L8H1Q6_ACACA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H1Q6_ACACA)

HSP 1 Score: 111 bits (277), Expect = 5.850e-22
Identity = 68/231 (29.44%), Postives = 101/231 (43.72%), Query Frame = 1
Query:  547 SPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRRKRP 1239
            SPG F  + + L   L  ++V LEDCL AF + E L GA++Y C+ C +  ++ K   +   PE+L +H+KRFR    +  K+ + V FPL DLD+SR+    A    V  +                                                          YDLV +V H GG+  GHY +Y  +D    W+ F+D+  T VS++TV +   Y+L Y R+ P
Sbjct:  342 SPGLFSKVTNWL--MLSNRTVTLEDCLQAFCTKEELMGADRYRCEHCKTLNDSQKFLRIAQPPELLCIHIKRFRHDSYFGGKLSDVVQFPLRDLDISRFCEQDADAPQVSMK----------------------------------------------------------YDLVSVVNHIGGISGGHYIAYALNDEDGKWYEFDDSWATAVSEDTVRNKEAYVLFYLRQSP 512          
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: A0A7J7JFU7_BUGNE (Ubiquitinyl hydrolase 1 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JFU7_BUGNE)

HSP 1 Score: 109 bits (273), Expect = 2.190e-21
Identity = 62/209 (29.67%), Postives = 88/209 (42.11%), Query Frame = 1
Query:  604 SVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRR 1230
            SV L+DC  AFFSP+ L G N Y C+ C   +   K  S+LH PE++ +H+KRFR   + S K+ + V FP+  LDVS ++   AL                                                                LY+L G++ H G +  GHYT+Y     +  W+ ++D+  TKVS ETV     Y+L Y R
Sbjct:  341 SVTLDDCFSAFFSPDDLSGDNMYSCENCKKLRNGLKEVSILHLPEVMCIHLKRFRHDLMHSSKIGSHVSFPITGLDVSPYIKHGALRGDTSSS---------------------------------------------------------LYNLTGVICHHGSVAGGHYTAYALHPATNIWYEYDDSYVTKVSVETVKQCQGYVLFYTR 492          
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: UPI001069497C (LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 20-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069497C)

HSP 1 Score: 108 bits (269), Expect = 4.140e-21
Identity = 64/229 (27.95%), Postives = 95/229 (41.48%), Query Frame = 1
Query:  547 SPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRRK 1233
            S G FG L   +  W+    V+ EDCL AFFS + L+G N Y C+ C   +   K   +   PE+L +H+KRFR  Y  S K+ + + FPL   DV ++L++       K                                                            YDLV ++ H G +  GHY +Y ++  +A W+ FND+  T+VS   V S   Y+L YR++
Sbjct:  325 SRGIFGTLFDWISSWIFGPRVSFEDCLAAFFSADELKGDNMYRCEHCSMLRNGMKECKVFKLPEMLCIHLKRFRHEYYHSSKISSFISFPLEAFDVKKYLTNDFSGKCTK------------------------------------------------------------YDLVAIITHHGSVGGGHYVAYCKNFVTAKWYEFNDSYVTEVSASYVQSCEAYVLFYRKR 493          
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: A0A1I8AR30_9BILA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8AR30_9BILA)

HSP 1 Score: 108 bits (270), Expect = 4.200e-21
Identity = 60/211 (28.44%), Postives = 94/211 (44.55%), Query Frame = 1
Query:  604 SVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGG-LEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRRK 1233
            +++L+DCL AFFSP+ L+G + Y C+ C   +   K+  +   PEIL +H+KRFR  Y++S KV   V FP+ D+D+S +L D+                                                           PS   P  YDL   V H GG  E+GHY +Y R++    W+ F+D+  T++    V +   Y+L Y+++
Sbjct:  441 AISLDDCLKAFFSPDHLKGEDMYSCEKCAKLRNGVKTCRITKLPEILCIHLKRFRHDYMYSTKVSTSVTFPICDMDLSEFLCDNV---------------------------------------------------------QPSDMVPTEYDLCAFVTHRGGGSEYGHYLAYCRNELDDNWYEFDDSTVTRIDAAEVLNKQAYVLFYQKQ 594          
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: UPI00106B3EAD (ubiquitin carboxyl-terminal hydrolase 33-like isoform X1 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B3EAD)

HSP 1 Score: 108 bits (269), Expect = 5.400e-21
Identity = 64/229 (27.95%), Postives = 95/229 (41.48%), Query Frame = 1
Query:  547 SPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRRK 1233
            S G FG L   +  W+    V+ EDCL AFFS + L+G N Y C+ C   +   K   +   PE+L +H+KRFR  Y  S K+ + + FPL   DV ++L++       K                                                            YDLV ++ H G +  GHY +Y ++  +A W+ FND+  T+VS   V S   Y+L YR++
Sbjct:  490 SRGIFGTLFDWISSWIFGPRVSFEDCLAAFFSADELKGDNMYRCEHCSMLRNGMKECKVFKLPEMLCIHLKRFRHEYYHSSKISSFISFPLEAFDVKKYLTNDFSGKCTK------------------------------------------------------------YDLVAIITHHGSVGGGHYVAYCKNFVTAKWYEFNDSYVTEVSASYVQSCEAYVLFYRKR 658          
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: UPI000F67000D (ubiquitin carboxyl-terminal hydrolase 20-like n=1 Tax=Penaeus vannamei TaxID=6689 RepID=UPI000F67000D)

HSP 1 Score: 107 bits (267), Expect = 7.930e-21
Identity = 62/214 (28.97%), Postives = 92/214 (42.99%), Query Frame = 1
Query:  589 WLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRR 1230
            WL   +V+L  CL AFFS + L+G N Y C+ CG  +   K + ++H PE+L++H+KRFR  Y++S K+   V FPLH LD++ +L        V                                                             YDL  ++ H G    GHYTSY ++  +  W+ F+D   T+VS ETV+    Y L Y++
Sbjct:  242 WLWGPAVSLHHCLAAFFSADELKGDNMYSCEKCGKLRNGVKYSKVVHLPEVLIIHLKRFRHEYMFSSKISQYVSFPLHGLDLTPFLHKDCTSEVVT------------------------------------------------------------YDLYAVICHHGTAGGGHYTSYCQNWSNGRWYEFDDQYVTEVSPETVAKCEAYCLFYKK 395          
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: A0A1V9XU25_9ACAR (Ubiquitinyl hydrolase 1 n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XU25_9ACAR)

HSP 1 Score: 107 bits (268), Expect = 9.240e-21
Identity = 63/209 (30.14%), Postives = 90/209 (43.06%), Query Frame = 1
Query:  604 SVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRR 1230
            SV+L DCL AFFS + L+G N Y C  C   +   K + LL  PE+L +H+KRFR   L+S K+ +RV FPL  LD++ +   HA +                                                               LYDLV ++ H G    GHYTSY +++    W+ F+DT  +KV    V++   Y+L YR+
Sbjct:  582 SVSLTDCLAAFFSADELKGDNMYSCGKCNKLRNGIKYSKLLELPEVLCIHLKRFRHELLFSTKISSRVSFPLEGLDMAPFTHPHARDEVT------------------------------------------------------------LYDLVAVICHHGTASSGHYTSYAKNEYDEQWYEFDDTYVSKVDPSVVATCEAYVLFYRK 730          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK59_9PHAE8.730e-25586.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS72_ECTSI3.730e-24287.92Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
A0A7S2RQP1_9STRA3.970e-2330.83Ubiquitin carboxyl-terminal hydrolase n=1 Tax=laby... [more]
L8H1Q6_ACACA5.850e-2229.44Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Acan... [more]
A0A7J7JFU7_BUGNE2.190e-2129.67Ubiquitinyl hydrolase 1 n=1 Tax=Bugula neritina Ta... [more]
UPI001069497C4.140e-2127.95LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal h... [more]
A0A1I8AR30_9BILA4.200e-2128.44Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Stei... [more]
UPI00106B3EAD5.400e-2127.95ubiquitin carboxyl-terminal hydrolase 33-like isof... [more]
UPI000F67000D7.930e-2128.97ubiquitin carboxyl-terminal hydrolase 20-like n=1 ... [more]
A0A1V9XU25_9ACAR9.240e-2130.14Ubiquitinyl hydrolase 1 n=1 Tax=Tropilaelaps merce... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12333contigE-fasciculatus_F_contig12333:1..3705 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score705.7
Seed ortholog evalue1.7e-200
Seed eggNOG ortholog2880.D8LS72
KEGG koko:K11848,ko:K11851,ko:K11857,ko:K11873
KEGG Pathwayko04137,map04137
GOsGO:0003674,GO:0003824,GO:0004843,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006464,GO:0006508,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0016569,GO:0016570,GO:0016578,GO:0016579,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0019783,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0036211,GO:0036459,GO:0040029,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0060255,GO:0065007,GO:0070011,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0080090,GO:0099114,GO:0101005,GO:0140096,GO:1901564,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.thiol-dependent ubiquitin-specific protease activity
EggNOG OGsCOG5077@1,COG5560@1,KOG1870@2759,KOG4598@2759
EC3.4.19.12
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko04121,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPeptidase C19, ubiquitin carboxyl-terminal hydrolase
Ec32 orthologEc-12_004600.1
Exons5
Model size1611
Cds size1611
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12333.1800.1prot_E-fasciculatus_F_contig12333.1800.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12333 1..3705 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927740.4788368-CDS-E-fasciculatus_F_contig12333:0..4731622927740.4788368-CDS-E-fasciculatus_F_contig12333:0..473Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12333 1..473 -
1695995674.4633725-CDS-E-fasciculatus_F_contig12333:0..4731695995674.4633725-CDS-E-fasciculatus_F_contig12333:0..473Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12333 1..473 -
1622927740.4970212-CDS-E-fasciculatus_F_contig12333:1260..15951622927740.4970212-CDS-E-fasciculatus_F_contig12333:1260..1595Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12333 1261..1595 -
1695995674.477655-CDS-E-fasciculatus_F_contig12333:1260..15951695995674.477655-CDS-E-fasciculatus_F_contig12333:1260..1595Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12333 1261..1595 -
1622927740.5092387-CDS-E-fasciculatus_F_contig12333:1992..20891622927740.5092387-CDS-E-fasciculatus_F_contig12333:1992..2089Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12333 1993..2089 -
1695995674.4855466-CDS-E-fasciculatus_F_contig12333:1992..20891695995674.4855466-CDS-E-fasciculatus_F_contig12333:1992..2089Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12333 1993..2089 -
1622927740.5254016-CDS-E-fasciculatus_F_contig12333:2647..27351622927740.5254016-CDS-E-fasciculatus_F_contig12333:2647..2735Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12333 2648..2735 -
1695995674.4950976-CDS-E-fasciculatus_F_contig12333:2647..27351695995674.4950976-CDS-E-fasciculatus_F_contig12333:2647..2735Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12333 2648..2735 -
1622927740.5402184-CDS-E-fasciculatus_F_contig12333:3087..37051622927740.5402184-CDS-E-fasciculatus_F_contig12333:3087..3705Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12333 3088..3705 -
1695995674.5050933-CDS-E-fasciculatus_F_contig12333:3087..37051695995674.5050933-CDS-E-fasciculatus_F_contig12333:3087..3705Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12333 3088..3705 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12333.1800.1

>prot_E-fasciculatus_F_contig12333.1800.1 ID=prot_E-fasciculatus_F_contig12333.1800.1|Name=mRNA_E-fasciculatus_F_contig12333.1800.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=537bp
MQRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASA
GSASATAAGGCSAGASSALTAATAMRGDRHHHNHEEAAPTTLGGPGGGGM
TPTMESPRAEWEPSDVSEKRTGLGGRSVMTVGADGESEAAGGDRSSDWGG
WRRTRGGWCSATRDDDGPHDRDDEGRGSGGGGSPGYFGGLVSSLGVWLGF
KSVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILML
HVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTS
GGDAHRKSAVRRGSASPDGGGYYGGGPATAAAAAAAESVAAAFSPSSPAP
VLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSS
ASPYILIYRRKRPGSSWAPGTQAQSMRPPGAGAAPAVAAAVAAAATASLL
ASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSITAATNGSTPMA
AAIGGTIGGAETVGEPQAKLSIGAGGGGGVSDTDGEG
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mRNA from alignment at E-fasciculatus_F_contig12333:1..3705-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12333.1800.1 ID=mRNA_E-fasciculatus_F_contig12333.1800.1|Name=mRNA_E-fasciculatus_F_contig12333.1800.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3705bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12333:1..3705- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCAGCGCGATGTGTACTGGCAAAGCGCCGCCGCGGAGACCTTCCAGGG AGTCCTCCTCGGGCGCATCACCTGCCGAACCTGCGGCCGCCATTCCGACC ACCCGGACCGCTTCTACGACCTCTCCGTCCCCCTCCTCGCCGCGTCGGCG GGCTCGGCTTCGGCGACGGCAGCCGGCGGGTGCAGCGCCGGCGCTTCCTC CGCCCTGACGGCGGCGACGGCGATGAGAGGGGACCGTCACCACCACAACC ACGAGGAGGCGGCGCCGACGACGCTGGGAGGCCCCGGGGGCGGGGGGATG ACGCCGACGATGGAGAGCCCGCGAGCGGAGTGGGAGCCGTCGGACGTGAG CGAGAAACGGACGGGGTTGGGGGGGCGGTCGGTGATGACCGTCGGGGCGG ACGGGGAGAGCGAAGCCGCGGGGGGGGACCGCAGCTCGGACTGGGGAGGG TGGCGGCGGACGAGGGGGGGATGGTGCTCGGCGACCCGAGACGACGACGG CCCCCACGATCGAGACGACGAGGGGAGAGGGAGCGGTGGCGGTGGTTCCC CGGGGTACTTTGGGGGGCTGGTGTCTTCGCTGGGCGTGTGGCTGGGGTTC AAGAGCGTTGCTCTCGAGGTGTGTTTTTTTTTGTTCTTGCTTTCTTTGTG GGCTGCTGCTGCTGCTGCTGCTGCATTTCTGCTGCTGCAGTTTTGCTGCT GCTGCTGCTGGATGACTGCAGGTACGGTTGTTCTTTGTGAGGGAAAACGT GGATACACGTTCCATTTGGTCACCAAAAGCCACAAATGCAACGAGAGCGT GTCGTACGTGTTTCTTGATCGCGACCTTGAAGGCAGGCAGGGCTTACTGC TGTCTCCATAGTAGGCACACTCTCGTTTGTTTTCTTTTCCGACCCCCGAA GTCTTGGTTGGACCCTTGGGTGACAGTAGTGACTTGATTGGTTTTCTCTT GCGCTCTCCTCTCGCTGCAGGACTGTTTGGATGCCTTCTTCTCGCCGGAG CGGCTTCGCGGGGCTAACCAGTACCACTGCGATGGCTGTGGTTCGAAGAA GGAAGCCGGTGAGTTATAGATGCATAACCGGAGTTTTGTTTATACATGTG CACGGCGGGGAGCGTGCACCCCGGAGCGAGGTTGTAAGGCGTTGCTCTCC GCCTCCGCCTCTATCCCCCCCCCTGTCTCGATCTGTTTCTACGCGTGCCC CGTTTGTCTGTGCAGTGGGTTTGCCGGTGTGGTTGCGCATTAATGGTAAA TTGGAACAGACCGTGCCAACGTAGCTGCCTAATCAATACAAAGACCTCGA CCTGTTTAACCTGGAGAAAAACTCCAGCACTCTCGCAACACCACGGAGCC CCCTGTCGGGGAGGGAGGACGTGGAAAGAAACTTGTGTGTACGTCATATG TAGTGCACGTTTGTATTTTACACCGAATCCCGCTACATAACCGGCTTGCC AGTGTTAAACACGGCAGTCGTAGACAGCGGCCTGAGGACAACGAAATGTG TCGAGTACATTTCCTCGCCGCTGTGGTGATCGTTTCCGTTTTTGCTTGCC TCTGACTTTTTGTATGTTCGTTTGTGTGGATCTCCTTCTTGTCGTGTGGC TGTTCGTCTTTGGCAGACAAATCGACAAGTCTCCTGCACGCGCCCGAGAT CTTGATGCTGCACGTCAAGAGATTTCGCCGCGGTTATCTCTGGAGCCACA AAGTGCACAACAGGTCAGTCAGCCTTCGAAGGGCCACCTTCCACCCCAGC AGCATGTCGGTAGCCCCTTGCTAGCCTTGGTTGCATCTTGCTGTTTGCAG GCTTCCCTTCGTCCCCTTATGTTTGGAGTTCCTCGCAAAGCTCAAAAATT TTGTACGTGATCTTTGCCTTTTACTCTCTTCTCTTCTTGGGTCATGTGTC TCTCGGTGATGGTGGCGCGGGATTGTGTCTGTAGCAACTCCCATTCCTCC CTGCCCCCCGATTGGAAGCTTTCATGCTGGCGGACGTCTATCGCACCGGC ATTGTGTGATGCTCGAGCGACTTCCTTTGCATTCACACCAAGTCTGGATA TATCCCATTTCGACAAAAATCTGCACCCTCCTTTCCGCCATGCCAACAAC AACACACCAGGGTAATTTTTCCGTTGCACGACTTGGACGTGAGCCGGTGG CTCTCGGACCACGCCCTAGAGTCTTCGGTCAAGCAGCAGCGCGCGTCCGG TACCAGCGGCGGGGACGCCCACCGCAAGTCCGCCGTCAGGCGCGGCAGCG CCAGCCCGGACGGTGGGGGCTACTACGGCGGCGGCCCGGCGACGGCGGCG GCGGCGGCGGCCGCGGAGAGCGTGGCCGCGGCTTTCTCGCCGTCCTCGCC GGCGCCGGTGCTTTACGACCTCGTGGGGCTGGTGGAGCACACGGGTGGGC TGGAGCACGGGCACTACACCAGCTACACCCGGGATGACGGCTCAGGTGTG CCAAGAAGAAGCGGGGTGTGGGTCAATCATGGTTTGTGTGCGTAGAGGTG TGCGCGGTTTTGGCTGCGGTTTTGGCTGGATTTGTCGAGGTGGTTCTGTT TGGAATTAGTGTTGGGGGCCGGCCCCCTACACGCCAGGAACTCAATTTTT GGAAAACAAGGTATGCTTAATACTCGTCAGACAGTCTGCTCTGTCATCAC TGAAGTAAAAGCCTGCAAGGCTCCTTCCTGATCCGCCCCACCACCGCCGT GTGATCCGGAGCACGTGGGTGATGAACGCGACCAACGACCAGCGGGAACA CGCAGATCGATGCAGACCAGCAAGGGTACATGTATGCTCACCTCCTCCTC CTCCTTATCCCGAAATGTGTCCGCCAACACAGAGCGTGAGGCACGTATGT ACTCGTGAAGGGACCGCTTTATCCACGAACGGTCTGATATGCATATATTT CTGGGCGCCGGGGCAGTGATTGAGTCGTTGGTAGTTTTTTAGCGCCGATA CTCCGGCAGAAACAACACATTGGTCTGTTCGCTGTATCGGACCTGTTGGC TGCTAGCTGCTAGATGCCCGACGAATATCGCCACCTCCATACCCGCTCTG ACCCCATCTTCTCAGTGCCCTACAATAGTTTGCAGAATGTTTTCAGCTGG TGATAGCTCAACCCCGGTTCAACCCGATTTTCGCGGCCATCTCTTCCTAC CCTCCCCCCTCTAAAACTGACCCTCGTGATCCCCTTTCTACACCGTTCCG CCCTCTCTCGTATACTCTCCCTCTCCCCCCAGCGACCTGGCACCACTTCA ACGACACCATCACGACCAAGGTCTCCCAGGAAACGGTGTCCTCCGCGAGC CCGTACATCCTCATCTACCGGCGCAAGCGGCCGGGCTCGTCGTGGGCCCC GGGGACCCAAGCCCAGTCCATGAGGCCGCCAGGAGCGGGGGCGGCGCCGG CGGTGGCGGCGGCGGTGGCGGCGGCGGCGACGGCCTCCCTCCTAGCGTCC GTCGGTATCGGCCCGGCGGCGGAGGAGGCGCGCGACGTCCGCAGCAGGGT GGACATCATGGCGCGGGAGATGGCCAAGGCGGCCGGAGGGGGGCACCGGC CCCCTAGCATCACCGCCGCGACCAACGGCTCCACGCCCATGGCGGCGGCA ATAGGAGGGACGATCGGGGGCGCGGAGACTGTCGGAGAGCCCCAGGCGAA ATTGTCCATCGGAGCCGGTGGCGGCGGCGGCGTGAGCGATACGGATGGGG AGGGG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12333:1..3705-

>mRNA_E-fasciculatus_F_contig12333.1800.1 ID=mRNA_E-fasciculatus_F_contig12333.1800.1|Name=mRNA_E-fasciculatus_F_contig12333.1800.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3222bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12333:1..3705- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCAGCGCGATGTGTACTGGCAAAGCGCCGCCGCGGAGACCTTCCAGGG
AGTCCTCCTCGGGCGCATCACCTGCCGAACCTGCGGCCGCCATTCCGACC
ACCCGGACCGCTTCTACGACCTCTCCGTCCCCCTCCTCGCCGCGTCGGCG
GGCTCGGCTTCGGCGACGGCAGCCGGCGGGTGCAGCGCCGGCGCTTCCTC
CGCCCTGACGGCGGCGACGGCGATGAGAGGGGACCGTCACCACCACAACC
ACGAGGAGGCGGCGCCGACGACGCTGGGAGGCCCCGGGGGCGGGGGGATG
ACGCCGACGATGGAGAGCCCGCGAGCGGAGTGGGAGCCGTCGGACGTGAG
CGAGAAACGGACGGGGTTGGGGGGGCGGTCGGTGATGACCGTCGGGGCGG
ACGGGGAGAGCGAAGCCGCGGGGGGGGACCGCAGCTCGGACTGGGGAGGG
TGGCGGCGGACGAGGGGGGGATGGTGCTCGGCGACCCGAGACGACGACGG
CCCCCACGATCGAGACGACGAGGGGAGAGGGAGCGGTGGCGGTGGTTCCC
CGGGGTACTTTGGGGGGCTGGTGTCTTCGCTGGGCGTGTGGCTGGGGTTC
AAGAGCGTTGCTCTCGAGATGCAGCGCGATGTGTACTGGCAAAGCGCCGC
CGCGGAGACCTTCCAGGGAGTCCTCCTCGGGCGCATCACCTGCCGAACCT
GCGGCCGCCATTCCGACCACCCGGACCGCTTCTACGACCTCTCCGTCCCC
CTCCTCGCCGCGTCGGCGGGCTCGGCTTCGGCGACGGCAGCCGGCGGGTG
CAGCGCCGGCGCTTCCTCCGCCCTGACGGCGGCGACGGCGATGAGAGGGG
ACCGTCACCACCACAACCACGAGGAGGCGGCGCCGACGACGCTGGGAGGC
CCCGGGGGCGGGGGGATGACGCCGACGATGGAGAGCCCGCGAGCGGAGTG
GGAGCCGTCGGACGTGAGCGAGAAACGGACGGGGTTGGGGGGGCGGTCGG
TGATGACCGTCGGGGCGGACGGGGAGAGCGAAGCCGCGGGGGGGGACCGC
AGCTCGGACTGGGGAGGGTGGCGGCGGACGAGGGGGGGATGGTGCTCGGC
GACCCGAGACGACGACGGCCCCCACGATCGAGACGACGAGGGGAGAGGGA
GCGGTGGCGGTGGTTCCCCGGGGTACTTTGGGGGGCTGGTGTCTTCGCTG
GGCGTGTGGCTGGGGTTCAAGAGCGTTGCTCTCGAGGACTGTTTGGATGC
CTTCTTCTCGCCGGAGCGGCTTCGCGGGGCTAACCAGTACCACTGCGATG
GCTGTGGTTCGAAGAAGGAAGCCGGACTGTTTGGATGCCTTCTTCTCGCC
GGAGCGGCTTCGCGGGGCTAACCAGTACCACTGCGATGGCTGTGGTTCGA
AGAAGGAAGCCGACAAATCGACAAGTCTCCTGCACGCGCCCGAGATCTTG
ATGCTGCACGTCAAGAGATTTCGCCGCGGTTATCTCTGGAGCCACAAAGT
GCACAACAGACAAATCGACAAGTCTCCTGCACGCGCCCGAGATCTTGATG
CTGCACGTCAAGAGATTTCGCCGCGGTTATCTCTGGAGCCACAAAGTGCA
CAACAGGGTAATTTTTCCGTTGCACGACTTGGACGTGAGCCGGTGGCTCT
CGGACCACGCCCTAGAGTCTTCGGTCAAGCAGCAGCGCGCGTCCGGTACC
AGCGGCGGGGACGCCCACCGCAAGTCCGCCGTCAGGCGCGGCAGCGCCAG
CCCGGACGGTGGGGGCTACTACGGCGGCGGCCCGGCGACGGCGGCGGCGG
CGGCGGCCGCGGAGAGCGTGGCCGCGGCTTTCTCGCCGTCCTCGCCGGCG
CCGGTGCTTTACGACCTCGTGGGGCTGGTGGAGCACACGGGTGGGCTGGA
GCACGGGCACTACACCAGCTACACCCGGGATGACGGCTCAGGGTAATTTT
TCCGTTGCACGACTTGGACGTGAGCCGGTGGCTCTCGGACCACGCCCTAG
AGTCTTCGGTCAAGCAGCAGCGCGCGTCCGGTACCAGCGGCGGGGACGCC
CACCGCAAGTCCGCCGTCAGGCGCGGCAGCGCCAGCCCGGACGGTGGGGG
CTACTACGGCGGCGGCCCGGCGACGGCGGCGGCGGCGGCGGCCGCGGAGA
GCGTGGCCGCGGCTTTCTCGCCGTCCTCGCCGGCGCCGGTGCTTTACGAC
CTCGTGGGGCTGGTGGAGCACACGGGTGGGCTGGAGCACGGGCACTACAC
CAGCTACACCCGGGATGACGGCTCAGCGACCTGGCACCACTTCAACGACA
CCATCACGACCAAGGTCTCCCAGGAAACGGTGTCCTCCGCGAGCCCGTAC
ATCCTCATCTACCGGCGCAAGCGGCCGGGCTCGTCGTGGGCCCCGGGGAC
CCAAGCCCAGTCCATGAGGCCGCCAGGAGCGGGGGCGGCGCCGGCGGTGG
CGGCGGCGGTGGCGGCGGCGGCGACGGCCTCCCTCCTAGCGTCCGTCGGT
ATCGGCCCGGCGGCGGAGGAGGCGCGCGACGTCCGCAGCAGGGTGGACAT
CATGGCGCGGGAGATGGCCAAGGCGGCCGGAGGGGGGCACCGGCCCCCTA
GCATCACCGCCGCGACCAACGGCTCCACGCCCATGGCGGCGGCAATAGGA
GGGACGATCGGGGGCGCGGAGACTGTCGGAGAGCCCCAGGCGAAATTGTC
CATCGGAGCCGGTGGCGGCGGCGGCGTGAGCGATACGGATGGGGAGGGGC
GACCTGGCACCACTTCAACGACACCATCACGACCAAGGTCTCCCAGGAAA
CGGTGTCCTCCGCGAGCCCGTACATCCTCATCTACCGGCGCAAGCGGCCG
GGCTCGTCGTGGGCCCCGGGGACCCAAGCCCAGTCCATGAGGCCGCCAGG
AGCGGGGGCGGCGCCGGCGGTGGCGGCGGCGGTGGCGGCGGCGGCGACGG
CCTCCCTCCTAGCGTCCGTCGGTATCGGCCCGGCGGCGGAGGAGGCGCGC
GACGTCCGCAGCAGGGTGGACATCATGGCGCGGGAGATGGCCAAGGCGGC
CGGAGGGGGGCACCGGCCCCCTAGCATCACCGCCGCGACCAACGGCTCCA
CGCCCATGGCGGCGGCAATAGGAGGGACGATCGGGGGCGCGGAGACTGTC
GGAGAGCCCCAGGCGAAATTGTCCATCGGAGCCGGTGGCGGCGGCGGCGT
GAGCGATACGGATGGGGAGGGG
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