mRNA_E-fasciculatus_F_contig12333.1800.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: A0A6H5JK59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK59_9PHAE) HSP 1 Score: 741 bits (1913), Expect = 8.730e-255 Identity = 483/556 (86.87%), Postives = 491/556 (88.31%), Query Frame = 1
Query: 4 QRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGS-----AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMTPTMESPRAEWEPSDVSEKRTGLGGRSVMTVG----------------------ADGESEAAGG-DRSSDWGGWRRTRGGWCSATRDDD-GPHDRDDEGRGSGGGG--SPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGSKKEAD--KSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRRKRPGSSWAPGTQAQSMRPPGAGAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSITAATNGSTP-MAAAIGGTIGGAETVGEPQAKLSIG 1569
QRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGS A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MTPTMESPRAEWEPSDVSEKRTGLGGRSV T+G ADGESEAAGG DRSSDWGGWRRTRGGWCSATRDDD GPHDRD EGR S +PGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCG KKEA KSTSLLHAPEILMLHVKRFRRGY WSHKVHNRV+FPLHDLDVSRWLSDHALESSV QQRA GTSGGDAHRKS+VRRG XXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYIL+YRRKRP SSWAPGTQAQSMRP GAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPS+TAATNGSTP AAA+G TIG AE VGEPQ +LSIG
Sbjct: 261 QRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSVSATAAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAMTPTMESPRAEWEPSDVSEKRTGLGGRSVTTLGLGGGAADEGXXXXXXXXXXXXGADGESEAAGGGDRSSDWGGWRRTRGGWCSATRDDDDGPHDRDHEGRASXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTSLLHAPEILMLHVKRFRRGYFWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRAPGTSGGDAHRKSSVRRGCASPDGXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILVYRRKRPSSSWAPGTQAQSMRP---GAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSMTAATNGSTPGAAAAVGATIG-AEAVGEPQPRLSIG 812
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: D8LS72_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS72_ECTSI) HSP 1 Score: 700 bits (1807), Expect = 3.730e-242 Identity = 466/530 (87.92%), Postives = 479/530 (90.38%), Query Frame = 1
Query: 4 QRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--MTPTMESPRAEWEPSDVSEKRTGLGGRSVMTVGADGESEAAGGDRSSDWGGWRRTRGGWCSATRDDD-GPHDRDDEGRGSGGGG----SPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRRKRPGSSWAPGTQAQSMRPPGAGAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSITAATNGSTP-MAAAIGGTIGGAETVGEPQAKLSIG 1569
QRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG MTPT+ESPRAEWEPSD G++ A G GGDRSSDWGGWRRTRGGWCSATRDDD GPHDR+ +PGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCG KKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRV+FPLHDLDVSRWLSDHALESSV QQRASGTSGGDAHRKS+VRR XXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATW+HFNDTITTKVSQ+TVSSASPYIL+YRRKRP SSW PGTQAQSMRP GAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPS+ AATNGSTP AAA+GGTIG AE VGEPQ +LSIG
Sbjct: 299 QRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEMTPTVESPRAEWEPSDDQHH-----GKAYAADQAPG-----GGDRSSDWGGWRRTRGGWCSATRDDDDGPHDREXXXXXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSVRRXXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWYHFNDTITTKVSQDTVSSASPYILVYRRKRPSSSWGPGTQAQSMRP---GAAPAVXXXXXXXXXXSLLASVGIGPAAEEARDVRSRVDIMAREMAKAAGGGHRPPSMNAATNGSTPGAAAAVGGTIG-AEAVGEPQPRLSIG 814
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: A0A7S2RQP1_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RQP1_9STRA) HSP 1 Score: 114 bits (286), Expect = 3.970e-23 Identity = 74/240 (30.83%), Postives = 118/240 (49.17%), Query Frame = 1
Query: 541 GGSPGYFGGLVSSLGVWLGFKS--VALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGY----LWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAP--VLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRRKR 1236
GGS G G+ ++ +G +S ++L +CL FF+PE+L+G QY+C+ C SK++A+KS S H PE+L L++KRF R L S+K V +PL +LD LSD + QQ + GG + + + SP S LYDL +V H+GG+ GHY +Y ++ + W+ ++D I + + + V S Y+L YR+++
Sbjct: 371 GGSSGSLWGVFKNIKTMIGLESQVLSLRECLQGFFAPEQLQGDEQYYCEKCKSKQDAEKSHSFAHLPEVLCLNLKRFNRNLGGWSLNSYKNMTSVTYPLRNLD----LSDFFYDKYGSQQEEASLLGGAFNVDGLT---------------------VNNTHAQESTSSSPESREDDRTLYDLFAVVRHSGGINGGHYIAYCKNPINLKWYEYDDDICSVIPENKVQSDDAYLLFYRKQK 585
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: L8H1Q6_ACACA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H1Q6_ACACA) HSP 1 Score: 111 bits (277), Expect = 5.850e-22 Identity = 68/231 (29.44%), Postives = 101/231 (43.72%), Query Frame = 1
Query: 547 SPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRRKRP 1239
SPG F + + L L ++V LEDCL AF + E L GA++Y C+ C + ++ K + PE+L +H+KRFR + K+ + V FPL DLD+SR+ A V + YDLV +V H GG+ GHY +Y +D W+ F+D+ T VS++TV + Y+L Y R+ P
Sbjct: 342 SPGLFSKVTNWL--MLSNRTVTLEDCLQAFCTKEELMGADRYRCEHCKTLNDSQKFLRIAQPPELLCIHIKRFRHDSYFGGKLSDVVQFPLRDLDISRFCEQDADAPQVSMK----------------------------------------------------------YDLVSVVNHIGGISGGHYIAYALNDEDGKWYEFDDSWATAVSEDTVRNKEAYVLFYLRQSP 512
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: A0A7J7JFU7_BUGNE (Ubiquitinyl hydrolase 1 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JFU7_BUGNE) HSP 1 Score: 109 bits (273), Expect = 2.190e-21 Identity = 62/209 (29.67%), Postives = 88/209 (42.11%), Query Frame = 1
Query: 604 SVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRR 1230
SV L+DC AFFSP+ L G N Y C+ C + K S+LH PE++ +H+KRFR + S K+ + V FP+ LDVS ++ AL LY+L G++ H G + GHYT+Y + W+ ++D+ TKVS ETV Y+L Y R
Sbjct: 341 SVTLDDCFSAFFSPDDLSGDNMYSCENCKKLRNGLKEVSILHLPEVMCIHLKRFRHDLMHSSKIGSHVSFPITGLDVSPYIKHGALRGDTSSS---------------------------------------------------------LYNLTGVICHHGSVAGGHYTAYALHPATNIWYEYDDSYVTKVSVETVKQCQGYVLFYTR 492
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: UPI001069497C (LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 20-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069497C) HSP 1 Score: 108 bits (269), Expect = 4.140e-21 Identity = 64/229 (27.95%), Postives = 95/229 (41.48%), Query Frame = 1
Query: 547 SPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRRK 1233
S G FG L + W+ V+ EDCL AFFS + L+G N Y C+ C + K + PE+L +H+KRFR Y S K+ + + FPL DV ++L++ K YDLV ++ H G + GHY +Y ++ +A W+ FND+ T+VS V S Y+L YR++
Sbjct: 325 SRGIFGTLFDWISSWIFGPRVSFEDCLAAFFSADELKGDNMYRCEHCSMLRNGMKECKVFKLPEMLCIHLKRFRHEYYHSSKISSFISFPLEAFDVKKYLTNDFSGKCTK------------------------------------------------------------YDLVAIITHHGSVGGGHYVAYCKNFVTAKWYEFNDSYVTEVSASYVQSCEAYVLFYRKR 493
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: A0A1I8AR30_9BILA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8AR30_9BILA) HSP 1 Score: 108 bits (270), Expect = 4.200e-21 Identity = 60/211 (28.44%), Postives = 94/211 (44.55%), Query Frame = 1
Query: 604 SVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGG-LEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRRK 1233
+++L+DCL AFFSP+ L+G + Y C+ C + K+ + PEIL +H+KRFR Y++S KV V FP+ D+D+S +L D+ PS P YDL V H GG E+GHY +Y R++ W+ F+D+ T++ V + Y+L Y+++
Sbjct: 441 AISLDDCLKAFFSPDHLKGEDMYSCEKCAKLRNGVKTCRITKLPEILCIHLKRFRHDYMYSTKVSTSVTFPICDMDLSEFLCDNV---------------------------------------------------------QPSDMVPTEYDLCAFVTHRGGGSEYGHYLAYCRNELDDNWYEFDDSTVTRIDAAEVLNKQAYVLFYQKQ 594
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: UPI00106B3EAD (ubiquitin carboxyl-terminal hydrolase 33-like isoform X1 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B3EAD) HSP 1 Score: 108 bits (269), Expect = 5.400e-21 Identity = 64/229 (27.95%), Postives = 95/229 (41.48%), Query Frame = 1
Query: 547 SPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRRK 1233
S G FG L + W+ V+ EDCL AFFS + L+G N Y C+ C + K + PE+L +H+KRFR Y S K+ + + FPL DV ++L++ K YDLV ++ H G + GHY +Y ++ +A W+ FND+ T+VS V S Y+L YR++
Sbjct: 490 SRGIFGTLFDWISSWIFGPRVSFEDCLAAFFSADELKGDNMYRCEHCSMLRNGMKECKVFKLPEMLCIHLKRFRHEYYHSSKISSFISFPLEAFDVKKYLTNDFSGKCTK------------------------------------------------------------YDLVAIITHHGSVGGGHYVAYCKNFVTAKWYEFNDSYVTEVSASYVQSCEAYVLFYRKR 658
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: UPI000F67000D (ubiquitin carboxyl-terminal hydrolase 20-like n=1 Tax=Penaeus vannamei TaxID=6689 RepID=UPI000F67000D) HSP 1 Score: 107 bits (267), Expect = 7.930e-21 Identity = 62/214 (28.97%), Postives = 92/214 (42.99%), Query Frame = 1
Query: 589 WLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRR 1230
WL +V+L CL AFFS + L+G N Y C+ CG + K + ++H PE+L++H+KRFR Y++S K+ V FPLH LD++ +L V YDL ++ H G GHYTSY ++ + W+ F+D T+VS ETV+ Y L Y++
Sbjct: 242 WLWGPAVSLHHCLAAFFSADELKGDNMYSCEKCGKLRNGVKYSKVVHLPEVLIIHLKRFRHEYMFSSKISQYVSFPLHGLDLTPFLHKDCTSEVVT------------------------------------------------------------YDLYAVICHHGTAGGGHYTSYCQNWSNGRWYEFDDQYVTEVSPETVAKCEAYCLFYKK 395
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Match: A0A1V9XU25_9ACAR (Ubiquitinyl hydrolase 1 n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XU25_9ACAR) HSP 1 Score: 107 bits (268), Expect = 9.240e-21 Identity = 63/209 (30.14%), Postives = 90/209 (43.06%), Query Frame = 1
Query: 604 SVALEDCLDAFFSPERLRGANQYHCDGCGSKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVIFPLHDLDVSRWLSDHALESSVKQQRASGTSGGDAHRKSAVRRGXXXXXXXXXXXXXXXXXXXXXXXXSVAAAFSPSSPAPVLYDLVGLVEHTGGLEHGHYTSYTRDDGSATWHHFNDTITTKVSQETVSSASPYILIYRR 1230
SV+L DCL AFFS + L+G N Y C C + K + LL PE+L +H+KRFR L+S K+ +RV FPL LD++ + HA + LYDLV ++ H G GHYTSY +++ W+ F+DT +KV V++ Y+L YR+
Sbjct: 582 SVSLTDCLAAFFSADELKGDNMYSCGKCNKLRNGIKYSKLLELPEVLCIHLKRFRHELLFSTKISSRVSFPLEGLDMAPFTHPHARDEVT------------------------------------------------------------LYDLVAVICHHGTASSGHYTSYAKNEYDEQWYEFDDTYVSKVDPSVVATCEAYVLFYRK 730 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12333.1800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12333.1800.1 >prot_E-fasciculatus_F_contig12333.1800.1 ID=prot_E-fasciculatus_F_contig12333.1800.1|Name=mRNA_E-fasciculatus_F_contig12333.1800.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=537bp MQRDVYWQSAAAETFQGVLLGRITCRTCGRHSDHPDRFYDLSVPLLAASAback to top mRNA from alignment at E-fasciculatus_F_contig12333:1..3705- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12333.1800.1 ID=mRNA_E-fasciculatus_F_contig12333.1800.1|Name=mRNA_E-fasciculatus_F_contig12333.1800.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3705bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12333:1..3705- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12333:1..3705- >mRNA_E-fasciculatus_F_contig12333.1800.1 ID=mRNA_E-fasciculatus_F_contig12333.1800.1|Name=mRNA_E-fasciculatus_F_contig12333.1800.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3222bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12333:1..3705- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |