prot_E-fasciculatus_F_contig12321.1792.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12321.1792.1
Unique Nameprot_E-fasciculatus_F_contig12321.1792.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length189
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12321.1792.1 vs. uniprot
Match: A0A6H5KA26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA26_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 4.580e-61
Identity = 124/188 (65.96%), Postives = 134/188 (71.28%), Query Frame = 0 
Query:    1 RCGGGRYVAPLDPLSLRPALALAIFRQQTRGQSIPGQQGQGQRDRLKKC---IQCIQXXXXXXRSEPAAACVGVDDGDVRQQPPRQQAETRSSRSGNVGAKKSLPIGLHSSSGRNAPPVPRRISPNDDPAGASPREGPPQNGPIGEGGTTALLGEPQRERTCCTHTRVRGSCGWARQVEVVLDAAGFV 185
            RC GGRY+APLD LSLRPALA  IFRQQTRGQ +PGQQGQ Q+   + C        XXXXXX         GVDDGD RQQPPRQ+A TRSS  G  GAK SLPIG +SS G  APPV RRISPNDDPA  SPR+G P  GPI EG TT L GE Q E+TCC HT + GSCGW R+VEVVLDAAGFV
Sbjct: 1125 RCEGGRYIAPLDSLSLRPALAFTIFRQQTRGQPVPGQQGQSQQPTSRSCQXXXXXXXXXXXXXXXXXXXXXXGVDDGDGRQQPPRQEAGTRSSLGGKEGAKNSLPIGSNSSPGTRAPPVHRRISPNDDPAEKSPRKGAPHRGPIFEGDTTTLPGESQPEQTCCVHTPIGGSCGWTRRVEVVLDAAGFV 1312
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12321.1792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KA26_9PHAE4.580e-6165.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12321contigE-fasciculatus_F_contig12321:1592..2158 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12321.1792.1mRNA_E-fasciculatus_F_contig12321.1792.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12321 1592..2382 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12321.1792.1 ID=prot_E-fasciculatus_F_contig12321.1792.1|Name=mRNA_E-fasciculatus_F_contig12321.1792.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=189bp
RCGGGRYVAPLDPLSLRPALALAIFRQQTRGQSIPGQQGQGQRDRLKKCI
QCIQQQQEQQRSEPAAACVGVDDGDVRQQPPRQQAETRSSRSGNVGAKKS
LPIGLHSSSGRNAPPVPRRISPNDDPAGASPREGPPQNGPIGEGGTTALL
GEPQRERTCCTHTRVRGSCGWARQVEVVLDAAGFVWQS*
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