mRNA_E-fasciculatus_F_contig12313.1786.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12313.1786.1
Unique NamemRNA_E-fasciculatus_F_contig12313.1786.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12313.1786.1 vs. uniprot
Match: A0A6H5KHK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK4_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 8.300e-109
Identity = 159/169 (94.08%), Postives = 164/169 (97.04%), Query Frame = 1
Query:    1 QVVKVQMQAKENLGRYTGVINCASSLVQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILCAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNDL 507
            +VVKVQMQAKENLGRYTGVI+CASSL+Q EGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSIL APAG DK TKRGYDFV+GMVGGTLATIANTPFDVVKSRMQNQLKVEGQ+PKYKHTIPSLITVV EEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNDL
Sbjct:  137 EVVKVQMQAKENLGRYTGVIHCASSLLQTEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILPAPAGVDKATKRGYDFVSGMVGGTLATIANTPFDVVKSRMQNQLKVEGQIPKYKHTIPSLITVVSEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNDL 305          
BLAST of mRNA_E-fasciculatus_F_contig12313.1786.1 vs. uniprot
Match: D7FJR3_ECTSI (Mitochondrial inner membrane transporter, exports 2-oxoadipate and 2-oxoglutarate from the mitochond n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJR3_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 5.100e-72
Identity = 113/114 (99.12%), Postives = 113/114 (99.12%), Query Frame = 1
Query:  166 MIGAIKTSILCAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNDL 507
            MIGAIKTSIL APAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNDL
Sbjct:    1 MIGAIKTSILSAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNDL 114          
BLAST of mRNA_E-fasciculatus_F_contig12313.1786.1 vs. uniprot
Match: U1GUP6_ENDPU (Mitochondrial thiamine pyrophosphate carrier 1 n=2 Tax=Endocarpon pusillum TaxID=364733 RepID=U1GUP6_ENDPU)

HSP 1 Score: 180 bits (456), Expect = 1.320e-53
Identity = 85/164 (51.83%), Postives = 116/164 (70.73%), Query Frame = 1
Query:    1 QVVKVQMQAKENLGRYTGVINCASSLVQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILCAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILD 492
            ++VK++MQ + + GRYTGV++C    V+ EGP ALY GLES LWR+ +WN  YFG I  +K S++  PA  +K    G DF++G +GGT+ TI NTP DVVKSR+QN  K+ G VPKY    P L TV+ EEG AA+YKG  P+++RLGPGGG++LV +  ++D
Sbjct:  100 ELVKIRMQDRASAGRYTGVMDCVVKTVKMEGPLALYNGLESTLWRHILWNAGYFGCIFQVK-SLMPKPAPGNKAQAMGTDFMSGAIGGTVGTILNTPMDVVKSRIQNSPKIAGSVPKYNWAWPGLATVMREEGFAALYKGFLPKVLRLGPGGGVLLVVYTGVMD 262          
BLAST of mRNA_E-fasciculatus_F_contig12313.1786.1 vs. uniprot
Match: W7IGP9_9PEZI (Putative mitochondrial 2-oxodicarboxylate carrier n=1 Tax=Drechslerella stenobrocha 248 TaxID=1043628 RepID=W7IGP9_9PEZI)

HSP 1 Score: 178 bits (451), Expect = 2.150e-52
Identity = 83/168 (49.40%), Postives = 120/168 (71.43%), Query Frame = 1
Query:    1 QVVKVQMQAKENLGRYTGVINCASSLVQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILCAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLND 504
            +++K+++Q + + G+Y G+++C   LV+AEGP ALY GLES +WR+ VWN  YFG+I   +T +   P    K ++   D +AG VGGT  TI NTPFDVVKSR+QN ++V+GQVPKY  TIP++ TV  EEG AA+YKG  P+++RLGPGGGI+LV +  +++   +
Sbjct:  132 ELIKIRLQDRASAGKYNGMVDCFVKLVKAEGPLALYNGLESTVWRHLVWNAGYFGVIFQARTLL---PKAETKQSQMVNDVIAGAVGGTAGTILNTPFDVVKSRIQNTVRVKGQVPKYNWTIPAVATVAREEGFAALYKGFLPKVLRLGPGGGILLVVYTGVIEFFEN 296          
BLAST of mRNA_E-fasciculatus_F_contig12313.1786.1 vs. uniprot
Match: A0A7S2WF09_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WF09_9STRA)

HSP 1 Score: 178 bits (451), Expect = 2.460e-52
Identity = 88/171 (51.46%), Postives = 122/171 (71.35%), Query Frame = 1
Query:    1 QVVKVQMQAKENLGRYTGVINCASSLVQAEGPFALYKGLESHLWRNAVWNGVYFGMIG--AIKTSILCAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNDL 507
            + VKV+MQAKENL R+     C ++L++ EG   LY G+   +WRNA+WNG+YFG+IG  +IK  +   PAG+ K  + GY F  G +G  + T+ NTPFDVVKSRMQ Q+ V G+  KY++++ ++  V  EEG AA+YKG+GPRLVRLGPGGGIM+V+F+ + +LL DL
Sbjct:  148 ETVKVRMQAKENLARFKNSTECFTALLKEEGVRGLYSGIGPQMWRNALWNGMYFGVIGLASIKFPL---PAGSSKEQQLGYKFCTGSLGSCVGTLCNTPFDVVKSRMQLQVPVPGEGLKYRNSLQAISVVAREEGTAALYKGLGPRLVRLGPGGGIMIVAFDFVSNLLRDL 315          
BLAST of mRNA_E-fasciculatus_F_contig12313.1786.1 vs. uniprot
Match: A0A8H8RRA1_9HELO (Putative mitochondrial 2-oxodicarboxylate carrier n=5 Tax=Lachnellula TaxID=47830 RepID=A0A8H8RRA1_9HELO)

HSP 1 Score: 176 bits (447), Expect = 3.000e-52
Identity = 82/169 (48.52%), Postives = 117/169 (69.23%), Query Frame = 1
Query:    1 QVVKVQMQAKENLGRYTGVINCASSLVQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILCAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNDL 507
            ++VK+++Q + + GRY G+I+C + +V+ EGP ALY GLES LWR+ +WN  YFG I  ++  +   P   +K+T+ GYD ++G  GGT+ TI NTP DVVKSR+QN  KV G +PKY    P+L TV+ EEG  A+YKG  P+++RLGPGGGI+LV F  ++D    +
Sbjct:  103 ELVKIRLQDRTSAGRYNGMIDCVAKIVKQEGPLALYNGLESTLWRHILWNAGYFGCIFQVRALL---PKADNKSTQMGYDLLSGATGGTVGTILNTPMDVVKSRIQNSPKVAGTIPKYNWAWPALGTVMKEEGFGALYKGFIPKVLRLGPGGGILLVVFTGVMDFFRKM 268          
BLAST of mRNA_E-fasciculatus_F_contig12313.1786.1 vs. uniprot
Match: S3CTK7_GLAL2 (Mitochondrial carrier n=2 Tax=Glarea lozoyensis TaxID=101852 RepID=S3CTK7_GLAL2)

HSP 1 Score: 174 bits (441), Expect = 5.230e-51
Identity = 80/164 (48.78%), Postives = 114/164 (69.51%), Query Frame = 1
Query:    1 QVVKVQMQAKENLGRYTGVINCASSLVQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILCAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILD 492
            ++VK+++Q K + G+YT  ++  + +V+AEGP ALY GLES +WR+ +WN  YFG I  ++  +   P   +KTT+ GYD ++G  GGT  TI NTP DVVKSR+QN  +V GQ+PKY    P++ TV  EEG  A+YKG  P+++RLGPGGGI+LV F  ++D
Sbjct:  131 ELVKIRLQDKASAGKYTSTLDAVTKIVKAEGPMALYNGLESTMWRHILWNAGYFGCIFQVRELL---PKADNKTTQMGYDLISGATGGTFGTILNTPLDVVKSRIQNSPRVAGQIPKYNWAFPAVGTVFKEEGFGALYKGFIPKVLRLGPGGGILLVVFTGVMD 291          
BLAST of mRNA_E-fasciculatus_F_contig12313.1786.1 vs. uniprot
Match: A0A084QWC4_STAC4 (Uncharacterized protein n=3 Tax=Stachybotrys TaxID=74721 RepID=A0A084QWC4_STAC4)

HSP 1 Score: 173 bits (439), Expect = 9.910e-51
Identity = 80/164 (48.78%), Postives = 115/164 (70.12%), Query Frame = 1
Query:    1 QVVKVQMQAKENLGRYTGVINCASSLVQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILCAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILD 492
            +++K+++Q K + G+Y G+I+C +  ++ EGP ALY+GLES +WR+ VWN  YFG I  ++ ++   PA   K+ K   D +AG VGGT+ TI NTP DVVKSR+QN  ++ GQVPKY    P + TV  EEG +A+YKG  P+++RLGPGGGI+LV F  ++D
Sbjct:  131 ELIKIRLQDKASAGKYNGMIDCVTKTIKQEGPLALYQGLESTMWRHIVWNAGYFGCIFQVRQAL---PAAETKSGKTFNDIIAGTVGGTVGTILNTPMDVVKSRIQNTPRIPGQVPKYNWAWPGVFTVAREEGFSALYKGFLPKVLRLGPGGGILLVVFTTVMD 291          
BLAST of mRNA_E-fasciculatus_F_contig12313.1786.1 vs. uniprot
Match: A0A3M2T668_9EURO (Mitochondrial thiamine pyrophosphate carrier 1 n=1 Tax=Aspergillus sp. HF37 TaxID=1960876 RepID=A0A3M2T668_9EURO)

HSP 1 Score: 173 bits (439), Expect = 1.070e-50
Identity = 81/169 (47.93%), Postives = 114/169 (67.46%), Query Frame = 1
Query:    1 QVVKVQMQAKENLGRYTGVINCASSLVQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILCAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNDL 507
            ++VK+++Q K + G+Y G+++    +VQAEGP A+Y GLES +WR+ +WN  YFG I  ++  +    AG +K  K   D +AG VGGT  T+ NTP DVVKSR+QN  KV GQVPKY    P++ TV+ EEG  A+YKG  P+++RLGPGGGI+LV F  ++D    +
Sbjct:  131 ELVKIRLQDKSSAGKYNGMLDVVKKIVQAEGPLAMYNGLESTMWRHVLWNAGYFGCIFQVRAQLPAVEAG-NKAEKTRNDLIAGTVGGTAGTLLNTPMDVVKSRIQNSPKVPGQVPKYNWAWPAVATVMKEEGFGALYKGFIPKVLRLGPGGGILLVVFTGVMDFFRKM 298          
BLAST of mRNA_E-fasciculatus_F_contig12313.1786.1 vs. uniprot
Match: A0A3M9Y8U1_9PEZI (Mitochondrial 2-oxodicarboxylate carrier 2 n=9 Tax=Verticillium TaxID=1036719 RepID=A0A3M9Y8U1_9PEZI)

HSP 1 Score: 173 bits (439), Expect = 1.160e-50
Identity = 82/169 (48.52%), Postives = 117/169 (69.23%), Query Frame = 1
Query:    1 QVVKVQMQAKENLGRYTGVINCASSLVQAEGPFALYKGLESHLWRNAVWNGVYFGMIGAIKTSILCAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQNQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIMLVSFNAILDLLNDL 507
            +++K++MQ K + G+YTG+++C S  V+AEG  ALY GLES +WR+ +WN  YFG I  ++  +   PA   +++K   D ++G VGGT+ TI NTP DVVKSR+QN  KV GQVPKY    P++ TV  EEG  A+YKG  P+++RLGPGGGI+LV F  ++D   ++
Sbjct:  132 ELIKIRMQDKASAGKYTGMLDCVSKTVRAEGILALYNGLESTMWRHVLWNAGYFGCIFQVRQLL---PAAETQSSKVRNDLLSGAVGGTVGTILNTPMDVVKSRIQNSPKVPGQVPKYNWAWPAVATVAKEEGFGALYKGFLPKVLRLGPGGGILLVVFTGVMDFFREM 297          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12313.1786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHK4_9PHAE8.300e-10994.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJR3_ECTSI5.100e-7299.12Mitochondrial inner membrane transporter, exports ... [more]
U1GUP6_ENDPU1.320e-5351.83Mitochondrial thiamine pyrophosphate carrier 1 n=2... [more]
W7IGP9_9PEZI2.150e-5249.40Putative mitochondrial 2-oxodicarboxylate carrier ... [more]
A0A7S2WF09_9STRA2.460e-5251.46Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A8H8RRA1_9HELO3.000e-5248.52Putative mitochondrial 2-oxodicarboxylate carrier ... [more]
S3CTK7_GLAL25.230e-5148.78Mitochondrial carrier n=2 Tax=Glarea lozoyensis Ta... [more]
A0A084QWC4_STAC49.910e-5148.78Uncharacterized protein n=3 Tax=Stachybotrys TaxID... [more]
A0A3M2T668_9EURO1.070e-5047.93Mitochondrial thiamine pyrophosphate carrier 1 n=1... [more]
A0A3M9Y8U1_9PEZI1.160e-5048.52Mitochondrial 2-oxodicarboxylate carrier 2 n=9 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12313contigE-fasciculatus_F_contig12313:26..1849 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score226.1
Seed ortholog evalue1.2e-56
Seed eggNOG ortholog2880.D7FJR3
Preferred nameSLC25A21
KEGG koko:K15110
KEGG TC2.A.29.2.4,2.A.29.2.5,2.A.29.2.8
GOsGO:0003674,GO:0005215,GO:0005310,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006082,GO:0006520,GO:0006553,GO:0006554,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006839,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009056,GO:0009063,GO:0009066,GO:0009068,GO:0009987,GO:0015075,GO:0015139,GO:0015318,GO:0015711,GO:0015742,GO:0015849,GO:0016020,GO:0016021,GO:0016054,GO:0019752,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0034220,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046942,GO:0046943,GO:0051179,GO:0051181,GO:0051184,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:0098656,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1903825,GO:1905039,GO:1990542,GO:1990550,GO:1990551
EggNOG free text desc.alpha-ketoglutarate transmembrane transporter activity
EggNOG OGsKOG0754@1,KOG0754@2759
COG Functional cat.U
BiGG ReactioniMM904.YPL134C,iND750.YPL134C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categoryother localisation
Exons4
Model size510
Cds size492
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12313.1786.1prot_E-fasciculatus_F_contig12313.1786.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12313 44..1849 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927738.5300808-UTR-E-fasciculatus_F_contig12313:25..431622927738.5300808-UTR-E-fasciculatus_F_contig12313:25..43Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12313 26..43 +
1695995673.6112375-UTR-E-fasciculatus_F_contig12313:25..431695995673.6112375-UTR-E-fasciculatus_F_contig12313:25..43Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12313 26..43 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927738.540848-CDS-E-fasciculatus_F_contig12313:43..1761622927738.540848-CDS-E-fasciculatus_F_contig12313:43..176Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12313 44..176 +
1695995673.6215312-CDS-E-fasciculatus_F_contig12313:43..1761695995673.6215312-CDS-E-fasciculatus_F_contig12313:43..176Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12313 44..176 +
1622927738.5516849-CDS-E-fasciculatus_F_contig12313:538..6871622927738.5516849-CDS-E-fasciculatus_F_contig12313:538..687Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12313 539..687 +
1695995673.6349618-CDS-E-fasciculatus_F_contig12313:538..6871695995673.6349618-CDS-E-fasciculatus_F_contig12313:538..687Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12313 539..687 +
1622927738.5616686-CDS-E-fasciculatus_F_contig12313:1126..12421622927738.5616686-CDS-E-fasciculatus_F_contig12313:1126..1242Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12313 1127..1242 +
1695995673.643905-CDS-E-fasciculatus_F_contig12313:1126..12421695995673.643905-CDS-E-fasciculatus_F_contig12313:1126..1242Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12313 1127..1242 +
1622927738.578075-CDS-E-fasciculatus_F_contig12313:1755..18491622927738.578075-CDS-E-fasciculatus_F_contig12313:1755..1849Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12313 1756..1849 +
1695995673.6530962-CDS-E-fasciculatus_F_contig12313:1755..18491695995673.6530962-CDS-E-fasciculatus_F_contig12313:1755..1849Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12313 1756..1849 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12313.1786.1

>prot_E-fasciculatus_F_contig12313.1786.1 ID=prot_E-fasciculatus_F_contig12313.1786.1|Name=mRNA_E-fasciculatus_F_contig12313.1786.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=164bp
MQAKENLGRYTGVINCASSLVQAEGPFALYKGLESHLWRNAVWNGVYFGM
IGAIKTSILCAPAGADKTTKRGYDFVAGMVGGTLATIANTPFDVVKSRMQ
NQLKVEGQVPKYKHTIPSLITVVGEEGLAAVYKGIGPRLVRLGPGGGIML
VSFNAILDLLNDL*
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mRNA from alignment at E-fasciculatus_F_contig12313:26..1849+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12313.1786.1 ID=mRNA_E-fasciculatus_F_contig12313.1786.1|Name=mRNA_E-fasciculatus_F_contig12313.1786.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1824bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12313:26..1849+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGGTGGTGAAGGTGCAGATGCAGGCCAAGGAGAACCTGGGGCGTTACAC CGGGGTGATCAATTGCGCGTCCAGCCTGGTGCAGGCTGAAGGCCCGTTCG CGCTGTACAAGGGGCTGGAGTCGCATCTGTGGAGGAACGCAGTCTGGAAC GGTGAGCAGCAGGGGGGGGGGGTCGCTCCAGTGAAAGCCTAGCACAACAT ACACATCCGTTTGTCTTGGACCACGTTTTGCCATCACACGCTGTCGTCTC CACATTCTTGAGTCTACAATAGTTTTGCCGTTATCTCCACGCGAAACGAG TTACCTACGAGTACAACAATCAATGCAAGCACCACGTGAAAAAAGGAAGG TCAAACAAATGTCCGATGTGACCTTCCTCCTTTATTTTTCCCGTCTGGAC CGTTCAAACATGTGCAGCTGACGTCGGCGCATTCGTAGACTGACGCCTAA AACATACTGGGTGACAACACACGCTACTGCTGTGGTGTCATGGCAAACAA CTTTGACACGCAGGCGTGTACTTCGGCATGATCGGTGCCATCAAGACCTC TATCCTGTGTGCTCCGGCGGGTGCCGACAAAACTACCAAGAGGGGCTACG ACTTCGTGGCGGGGATGGTGGGGGGCACGCTGGCGACGATAGCCAACACG CCGTTTGACGTGGTGAGTTGAAGCGAATATCTGTAGCTTTAAGACAAGAC GCTGGCGACGGTAGCCAACACGCCGTTTGACGTGGTGGGTTGAAGCGAAT GTCTGTAGCTTTAAGTCAAGACGCTGGCGACGGTAGCCAACACGCTGTTT GACGTGGGGAGTTGAAGCGAATGACCGTAGCTTTAAGACGGGATCGTCTG CAGCTAAGACAAGAGGAACGCCTGTAGCTAGACATTAGCGTCTGTAGCTT TTAAGGCAGGCAGGCGGGGAAGGTCGAAGTGGTAAATTGCCGTAGCTGCC GTAGACACGCGACACAAACGCGACAAAAGTCAAAGTTTTTTTTCATGTCC GCTGTGTTCCTCAAGCGAAAACACGGCTCAAGCTCTGGTTTTATGCTCCC TCTTGCTGTTTTCGCCGCTATACTGCTGTGTCGCCTGAACCGGCTTTTCA GGTGAAGTCGCGAATGCAGAACCAGCTCAAGGTGGAGGGCCAAGTTCCCA AGTACAAGCACACCATCCCGTCCCTCATCACGGTTGTGGGCGAGGAGGGG TTGGCAGCCGTGTACAAGTGAGTCGGGTGTTTTCTGGACCCATCAGCTTT GCAAACGGTAGCGTAACCATTGGGCACGTGCACGTAGTGTTGTTGTTGTT GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTATTCCAGTCTCTGCTCAGTA CCTTCTACAACATCCGTACGGGTCCAACTGAGGTGGACGCCTCACGTAGT CACAGACCCAACTACCCACATGATCAAGTTACACGTGTTGTGTATTTTTT TCGCTGTGTTGTTTTTCTGTGGTGGGAAGACACGTTTGCTGTGTTGTATG CATGTCCCGTTCGTTTCCGTGTCCGCTTTTTTCGCATGGACCGACCGACA CGCCGTGCATTGCTTCACTCATCACGGCTATCACTCGAGCGTGCCCGCAT AGACGTGAGCTGCTTTCATGTAATTTTTTTTCGTGTTGCTTCATGTCGTG GCAGAGCTTCACACGCCCGCCATCTACATTTCCGTCCTGATTTGTGTTTT TTGCGCACCGTTCGTTGATCGGATCGACAGGGGCATCGGCCCACGGCTTG TCAGGCTTGGCCCCGGTGGCGGAATCATGCTCGTGTCCTTCAATGCCATC CTGGACTTACTCAATGACTTGTAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12313:26..1849+

>mRNA_E-fasciculatus_F_contig12313.1786.1 ID=mRNA_E-fasciculatus_F_contig12313.1786.1|Name=mRNA_E-fasciculatus_F_contig12313.1786.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=984bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12313:26..1849+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCAGGCCAAGGAGAACCTGGGGCGTTACACCGGGGTGATCAATTGCGC
GTCCAGCCTGGTGCAGGCTGAAGGCCCGTTCGCGCTGTACAAGGGGCTGG
AGTCGCATCTGTGGAGGAACGCAGTCTGGAACGATGCAGGCCAAGGAGAA
CCTGGGGCGTTACACCGGGGTGATCAATTGCGCGTCCAGCCTGGTGCAGG
CTGAAGGCCCGTTCGCGCTGTACAAGGGGCTGGAGTCGCATCTGTGGAGG
AACGCAGTCTGGAACGGCGTGTACTTCGGCATGATCGGTGCCATCAAGAC
CTCTATCCTGTGTGCTCCGGCGGGTGCCGACAAAACTACCAAGAGGGGCT
ACGACTTCGTGGCGGGGATGGTGGGGGGCACGCTGGCGACGATAGCCAAC
ACGCCGTTTGACGTGGCGTGTACTTCGGCATGATCGGTGCCATCAAGACC
TCTATCCTGTGTGCTCCGGCGGGTGCCGACAAAACTACCAAGAGGGGCTA
CGACTTCGTGGCGGGGATGGTGGGGGGCACGCTGGCGACGATAGCCAACA
CGCCGTTTGACGTGGTGAAGTCGCGAATGCAGAACCAGCTCAAGGTGGAG
GGCCAAGTTCCCAAGTACAAGCACACCATCCCGTCCCTCATCACGGTTGT
GGGCGAGGAGGGGTTGGCAGCCGTGTACAAGTGAAGTCGCGAATGCAGAA
CCAGCTCAAGGTGGAGGGCCAAGTTCCCAAGTACAAGCACACCATCCCGT
CCCTCATCACGGTTGTGGGCGAGGAGGGGTTGGCAGCCGTGTACAAGGGC
ATCGGCCCACGGCTTGTCAGGCTTGGCCCCGGTGGCGGAATCATGCTCGT
GTCCTTCAATGCCATCCTGGACTTACTCAATGACTTGTAAGGGCATCGGC
CCACGGCTTGTCAGGCTTGGCCCCGGTGGCGGAATCATGCTCGTGTCCTT
CAATGCCATCCTGGACTTACTCAATGACTTGTAA
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