mRNA_E-fasciculatus_F_contig12309.1782.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12309.1782.1 vs. uniprot
Match: D7FZT7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZT7_ECTSI) HSP 1 Score: 548 bits (1412), Expect = 1.050e-189 Identity = 321/382 (84.03%), Postives = 333/382 (87.17%), Query Frame = 1
Query: 70 MLQPNSQGHGSYFEAFKRRSNVSLDAAQRDKVLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEEKVMSATKLVRLAQTYSEEQGREQGRINDAMEIRLESLEQQIDAVSTAVDHAATAQS-NSEVCSCEGDGGIPSTRHPPVHPPGLHEINTAGLSEWMTGVDKQLEDLRNLVSAQLTTGSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVQETKTAAVATARDECARIEERVRRLEEAIEETGPGAGHSGGDASLPSPATTVVVDQRDRGRRLERCAELAQEGLTRSRSASRSPVRRNPSAPSPAIEAAVAPLANDAGTLTVEVDNDALLGAAEDGTAVARRASEVAEEALKAGREAIERSERT 1212
MLQPNSQGHGSYFEAFKRRSNV+LDAAQRDK+LTDRGAYLNFLEIQLERVSAACITSQHFG RIDAATAKATAAE+KVMSATKLVRLAQTYSEEQGREQGRIND MEIRLESLEQQIDAVS AVD AA AQS N +V +C GD GIPS RHPPV+PP LHEINTAGLSEWMTGVDKQLEDLRNLVSAQ+TTGS XXXXXXXXX AV ETKT AVATARDECARIEERVRRLEEAI ET GAGHSGGD+SL SPATTVV DQRDRGRRLERCAELA+EGLTRSRSASRSPVRR+PSAP P+ E A APLA+DAGTLTVE DNDALLGA EDGTAVARRASEVAEEALKAGREAIERSERT
Sbjct: 1 MLQPNSQGHGSYFEAFKRRSNVTLDAAQRDKMLTDRGAYLNFLEIQLERVSAACITSQHFGCRIDAATAKATAAEDKVMSATKLVRLAQTYSEEQGREQGRINDVMEIRLESLEQQIDAVSAAVDDAAMAQSYNLDVGTCMGDDGIPSARHPPVYPPDLHEINTAGLSEWMTGVDKQLEDLRNLVSAQITTGSXXXXXXXXXXXGSKATTAVGNSPQSENDAAEATAVPETKTEAVATARDECARIEERVRRLEEAIGETSAGAGHSGGDSSLLSPATTVV-DQRDRGRRLERCAELAREGLTRSRSASRSPVRRSPSAPPPSTEIAAAPLASDAGTLTVEADNDALLGAVEDGTAVARRASEVAEEALKAGREAIERSERT 381
BLAST of mRNA_E-fasciculatus_F_contig12309.1782.1 vs. uniprot
Match: K3X5Y2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5Y2_GLOUD) HSP 1 Score: 78.2 bits (191), Expect = 3.770e-12 Identity = 43/89 (48.31%), Postives = 63/89 (70.79%), Query Frame = 1
Query: 91 GHGSYFEAFKRRSNVSLDAAQRD--KVLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEEKVMSATKLVRLAQTYSEE 351
G GSY+E + R S ++ +++ K+LTDR AY++FLE+QLERVSAAC+T+Q F +RI A TA+++KV S +K+ RL Q Y E+
Sbjct: 3 GSGSYYEEYMRSSALAKHGHEKNAKKLLTDRNAYISFLEVQLERVSAACLTTQSFEARIAELEAAQTASDQKVSSLSKVFRLNQEYIEQ 91
BLAST of mRNA_E-fasciculatus_F_contig12309.1782.1 vs. uniprot
Match: A0A8J2EZL6_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2EZL6_9DINO) HSP 1 Score: 75.1 bits (183), Expect = 6.200e-11 Identity = 37/74 (50.00%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 139 LDAAQRDKVLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEEKVMSATKLVRLAQTYSEEQGR 360
LD A+++++LTDR AYLNFLE+QLERVS++C+T Q F RI+ + EEKV++ +L++L Q Y+EE R
Sbjct: 20 LDKAEKNRLLTDRAAYLNFLEVQLERVSSSCLTVQGFSERIEQVQTQVNGMEEKVLNCGRLIKLMQQYNEEVNR 93
BLAST of mRNA_E-fasciculatus_F_contig12309.1782.1 vs. uniprot
Match: A0A8J1ZL28_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1ZL28_9DINO) HSP 1 Score: 74.3 bits (181), Expect = 1.050e-10 Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 1
Query: 79 PNSQGHGSYFEAFKRRSNVSLDAAQRDKVLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEEKVMSATKLVRLAQTYSEEQGR 360
P S G G A S V D ++++LTDR AYLNFLE+QLERVS++C+T Q F RI+ + A EEKV++ +L++L Q Y+EE R
Sbjct: 15 PRSTGGGGAGAAVGPSSLV--DKVDKNRLLTDRAAYLNFLEVQLERVSSSCLTVQAFSERIEQVQTQVNAMEEKVLNCGRLIKLMQQYNEEVNR 106
BLAST of mRNA_E-fasciculatus_F_contig12309.1782.1 vs. uniprot
Match: A0A8J5M8G1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M8G1_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.300e-9 Identity = 62/191 (32.46%), Postives = 90/191 (47.12%), Query Frame = 1
Query: 85 SQGHGSYFEAFKRRSNVSL---DAAQRDKVLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEEKVMSATKLVRLAQTYSEEQGREQGRINDAMEIRLESLEQQIDAVSTAVDHAATAQSNSEVCSCEGDGGIPST-------RHPPVHPPGLHEINTAGLSEWMTGVDKQLEDLRNLVSA 627
+QG GSY++ + RSN L + K+LTDR AY++FLE+QLERVSAAC+T+Q F R+ + ++K+ S +K+ RL Q Y +E QQ A S HAA + E S E + P R + P L E N A L + +++E+L+ V A
Sbjct: 2 AQGSGSYYDDYM-RSNAMLKHCNEKNTKKLLTDRSAYISFLEVQLERVSAACLTTQTFEKRLAELESAQMTNDQKLGSLSKVFRLNQEY------------------VEQTSQQ--AQSELAGHAAKVDAWMEKFSAELERQQPRMATLEEQFRQCQEYLPRLVETNDAALDDVKQQAQQEIEELKAQVFA 171
BLAST of mRNA_E-fasciculatus_F_contig12309.1782.1 vs. uniprot
Match: G5A4A8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A4A8_PHYSP) HSP 1 Score: 69.7 bits (169), Expect = 1.750e-9 Identity = 39/91 (42.86%), Postives = 60/91 (65.93%), Query Frame = 1
Query: 85 SQGHGSYFEAFKRRSNVSLDAAQRD--KVLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEEKVMSATKLVRLAQTYSEE 351
+QG GSY++ + R + + +++ K+LTDR AY++FLE+QLERVSAAC+T+Q F R+ A ++KV S +K+ RL Q Y E+
Sbjct: 2 AQGSGSYYDDYMRSNAMLKHCGEKNAKKLLTDRNAYISFLEVQLERVSAACLTTQTFERRLAELECAQLANDQKVGSLSKVFRLNQEYVEQ 92
BLAST of mRNA_E-fasciculatus_F_contig12309.1782.1 vs. uniprot
Match: A0A2P4X7G8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7G8_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.070e-9 Identity = 37/91 (40.66%), Postives = 59/91 (64.84%), Query Frame = 1
Query: 85 SQGHGSYFEAFKRRSNVSLDAAQRD--KVLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEEKVMSATKLVRLAQTYSEE 351
+QG GSY++ + R + + +++ K+LTDR AY++FLE+QLERVSAAC+ +Q F R+ ++KV S +K++RL Q Y E+
Sbjct: 2 AQGSGSYYDDYMRSNAMLKHCGEKNTRKLLTDRNAYISFLEVQLERVSAACLNTQTFEKRLAELENSQITNDQKVGSLSKVIRLNQEYVEQ 92
BLAST of mRNA_E-fasciculatus_F_contig12309.1782.1 vs. uniprot
Match: V9FW40_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=V9FW40_PHYPR) HSP 1 Score: 70.1 bits (170), Expect = 2.620e-9 Identity = 64/191 (33.51%), Postives = 92/191 (48.17%), Query Frame = 1
Query: 85 SQGHGSYFEAFKRRSNVSL---DAAQRDKVLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEEKVMSATKLVRLAQTYSEEQGREQGRINDAMEIRLESLEQQIDAVSTAVDHAATAQSNSEVCSCEGDGGIPST-------RHPPVHPPGLHEINTAGLSEWMTGVDKQLEDLRNLVSA 627
+QG GSY++ + RSN L + K+LTDR AY++FLE+QLERVSAAC+T+Q F R+ + A ++K+ S +K+ RL Q Y +E + QQ A S HAA + E S E + P R + P L E N A L V +++E+L+ V A
Sbjct: 2 AQGSGSYYDDYM-RSNAMLKHCNEKSTKKLLTDRNAYISFLEVQLERVSAACLTTQTFEKRLAELESAQMANDQKLGSLSKVFRLNQEY------------------VEQISQQ--AQSELAGHAAKVDAWMEKFSVELERQQPRMATLEEQFRQCQEYLPRLVETNDAALDGVRHQVQQEIEELKAQVFA 171
BLAST of mRNA_E-fasciculatus_F_contig12309.1782.1 vs. uniprot
Match: A0A0W8DL00_PHYNI (Chromatin structure-remodeling complex protein BSH n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DL00_PHYNI) HSP 1 Score: 70.1 bits (170), Expect = 3.360e-9 Identity = 64/191 (33.51%), Postives = 92/191 (48.17%), Query Frame = 1
Query: 85 SQGHGSYFEAFKRRSNVSL---DAAQRDKVLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEEKVMSATKLVRLAQTYSEEQGREQGRINDAMEIRLESLEQQIDAVSTAVDHAATAQSNSEVCSCEGDGGIPST-------RHPPVHPPGLHEINTAGLSEWMTGVDKQLEDLRNLVSA 627
+QG GSY++ + RSN L + K+LTDR AY++FLE+QLERVSAAC+T+Q F R+ + A ++K+ S +K+ RL Q Y +E + QQ A S HAA + E S E + P R + P L E N A L V +++E+L+ V A
Sbjct: 2 AQGSGSYYDDYM-RSNAMLKHCNEKSTKKLLTDRNAYISFLEVQLERVSAACLTTQTFEKRLAELESAQMANDQKLGSLSKVFRLNQEY------------------VEQISQQ--AQSELAGHAAKVDAWMEKFSVELERQQPRMATLEEQFRQCQEYLPRLVETNDAALDGVRHQVQQEIEELKAQVFA 171
BLAST of mRNA_E-fasciculatus_F_contig12309.1782.1 vs. uniprot
Match: A0A225WAZ8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WAZ8_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 3.410e-9 Identity = 38/91 (41.76%), Postives = 61/91 (67.03%), Query Frame = 1
Query: 85 SQGHGSYFEAFKRRSNVSLDAAQRD--KVLTDRGAYLNFLEIQLERVSAACITSQHFGSRIDAATAKATAAEEKVMSATKLVRLAQTYSEE 351
+QG GSY++ + R + + ++++ K+LTDR AY++FLE+QLERVS AC+T+Q F R+ A A ++K+ S +K+ RL Q Y E+
Sbjct: 2 AQGAGSYYDDYMRSNAMLKHCSEKNAKKLLTDRNAYISFLEVQLERVSTACLTTQAFEKRLAALENAQVANDQKLGSLSKVFRLNQEYVEQ 92 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12309.1782.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12309.1782.1 >prot_E-fasciculatus_F_contig12309.1782.1 ID=prot_E-fasciculatus_F_contig12309.1782.1|Name=mRNA_E-fasciculatus_F_contig12309.1782.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=381bp MLQPNSQGHGSYFEAFKRRSNVSLDAAQRDKVLTDRGAYLNFLEIQLERVback to top mRNA from alignment at E-fasciculatus_F_contig12309:278..1861- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12309.1782.1 ID=mRNA_E-fasciculatus_F_contig12309.1782.1|Name=mRNA_E-fasciculatus_F_contig12309.1782.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1584bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12309:278..1861- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12309:278..1861- >mRNA_E-fasciculatus_F_contig12309.1782.1 ID=mRNA_E-fasciculatus_F_contig12309.1782.1|Name=mRNA_E-fasciculatus_F_contig12309.1782.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2286bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12309:278..1861- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |