prot_E-fasciculatus_F_contig12308.1781.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12308.1781.1
Unique Nameprot_E-fasciculatus_F_contig12308.1781.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length171
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12308.1781.1 vs. uniprot
Match: D7FHD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHD1_ECTSI)

HSP 1 Score: 322 bits (826), Expect = 1.290e-104
Identity = 164/169 (97.04%), Postives = 168/169 (99.41%), Query Frame = 0 
Query:    3 RRPAGRVCSSLGNTEDETAASTKKAFDDILEKGNTEECLNLLRRSGSKLEIGMAEASKLLNVMSGELKLDLKKENPHDNLTNTYNALKAAGLLRGFGSIDFAKGPSSQSRDVSAEKLLSLSGVEKQNLAPGRPTGSWLAAGVGVFGAEYLAGILMGLDPLQTVIPWTIG 171
            RR AGRVCSSLGNTEDETAA++KKAFDDILEKGNTEECLNLLRRSGSKLEIGMAEASKLLNVMSGELKLDLKKENPHDNLTNTYNALKAAGLLRGFGSIDF+KGPSSQSRDVSAEKLLSLSGVEKQNLAPGRPTGSWLAAGVGVFGAEYLAGILMGLDPLQTVIPWT+G
Sbjct:   93 RRSAGRVCSSLGNTEDETAAASKKAFDDILEKGNTEECLNLLRRSGSKLEIGMAEASKLLNVMSGELKLDLKKENPHDNLTNTYNALKAAGLLRGFGSIDFSKGPSSQSRDVSAEKLLSLSGVEKQNLAPGRPTGSWLAAGVGVFGAEYLAGILMGLDPLQTVIPWTLG 261
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BLAST of mRNA_E-fasciculatus_F_contig12308.1781.1 vs. uniprot
Match: A0A7S2C9N4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C9N4_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.580e-5
Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 0 
Query:   94 LLRGFGSIDFAKGPSS-QSRDVSAEKLLSLSGVEKQNLAPGRPTGSWLAAGVGVFGAEYLAGILMGLDPLQTVIPWTIG 171
            LLR FGS++    P++ +  D+    LL L+G  +  L PG     W  AGVG+   E+    L+G+DPL+T++P T+G
Sbjct:    5 LLRAFGSVNADSYPAAVEPVDIDPPTLLKLTGFNQTALTPGSNGNLWTYAGVGLAIFEFNVAPLIGIDPLKTLLPLTLG 83
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12308.1781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHD1_ECTSI1.290e-10497.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2C9N4_9STRA1.580e-537.97Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 137..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12308contigE-fasciculatus_F_contig12308:108..3774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12308.1781.1mRNA_E-fasciculatus_F_contig12308.1781.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12308 96..3774 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12308.1781.1 ID=prot_E-fasciculatus_F_contig12308.1781.1|Name=mRNA_E-fasciculatus_F_contig12308.1781.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=171bp
MRRRPAGRVCSSLGNTEDETAASTKKAFDDILEKGNTEECLNLLRRSGSK
LEIGMAEASKLLNVMSGELKLDLKKENPHDNLTNTYNALKAAGLLRGFGS
IDFAKGPSSQSRDVSAEKLLSLSGVEKQNLAPGRPTGSWLAAGVGVFGAE
YLAGILMGLDPLQTVIPWTIG
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