mRNA_E-fasciculatus_F_contig12303.1778.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12303.1778.1
Unique NamemRNA_E-fasciculatus_F_contig12303.1778.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12303.1778.1 vs. uniprot
Match: D8LLT5_ECTSI (PIPK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT5_ECTSI)

HSP 1 Score: 551 bits (1420), Expect = 1.110e-192
Identity = 279/286 (97.55%), Postives = 281/286 (98.25%), Query Frame = 1
Query:    1 QPVYLQDIDFATAGGVATAADVLVKQARNRVRINRLKEGQAKGRHTVPDEKGDEKRLKLTIRMMLGVRVAVGRQCNPLDQPGAEISEEAFSQAGVDKYTFPPAGATGRMATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEESAYMLSVAGNYDYLELITNSKSGSFFFYSHDQKYIIKAMKRAEAKFFRKILPKYYAHHLAHPGSFLIRFCGMYLVKNGHKKIPFIVMKCVEGDTNKTIHSKYDLKGSSLGRSAKEGEKVLKDNDLDVKYGKIHLGSQKAAFVEVS 858
            +PVYLQDIDFATAGGVATAADVLVKQARNRVRINRLKEGQAKGRHT PDEKGDEKRLKLTIRMMLGVRVAVGRQ NPLDQPGAEISEEAFSQ  VDKYTFPPAGATGRMATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEESAYMLSVAGNYDYLELITNSKSGSFFFYSHDQKYIIKAMKRAEAKFFRKILPKYYAHHLAHPGSFLIRFCGMYLVKNGHKKIPFIVMKCVEGDTNKTIHSKYDLKGSSLGRSAKEGEKVLKDNDLDVKYGKIHLGSQKAAFVE +
Sbjct:  151 EPVYLQDIDFATAGGVATAADVLVKQARNRVRINRLKEGQAKGRHTEPDEKGDEKRLKLTIRMMLGVRVAVGRQSNPLDQPGAEISEEAFSQ--VDKYTFPPAGATGRMATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEESAYMLSVAGNYDYLELITNSKSGSFFFYSHDQKYIIKAMKRAEAKFFRKILPKYYAHHLAHPGSFLIRFCGMYLVKNGHKKIPFIVMKCVEGDTNKTIHSKYDLKGSSLGRSAKEGEKVLKDNDLDVKYGKIHLGSQKAAFVEAA 434          
BLAST of mRNA_E-fasciculatus_F_contig12303.1778.1 vs. uniprot
Match: A0A6H5KVE7_9PHAE (PIPK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVE7_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 9.850e-119
Identity = 175/178 (98.31%), Postives = 176/178 (98.88%), Query Frame = 1
Query:  325 MATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEESAYMLSVAGNYDYLELITNSKSGSFFFYSHDQKYIIKAMKRAEAKFFRKILPKYYAHHLAHPGSFLIRFCGMYLVKNGHKKIPFIVMKCVEGDTNKTIHSKYDLKGSSLGRSAKEGEKVLKDNDLDVKYGKIHLGSQKAAFVEVS 858
            MATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEESAYMLSVAGNYDYLELITNSKSGSFFFYSHDQKYIIKAMKRAEAKF RKILPKYYAHHLAHPGSFLIRFCGMYLVKNGHKKIPFIVMKCVEGDTNKTIHSKYDLKGSSLGRSAKEGEKVLKDNDLDVKYGKIHLGSQKAAFVE +
Sbjct:    1 MATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEESAYMLSVAGNYDYLELITNSKSGSFFFYSHDQKYIIKAMKRAEAKFLRKILPKYYAHHLAHPGSFLIRFCGMYLVKNGHKKIPFIVMKCVEGDTNKTIHSKYDLKGSSLGRSAKEGEKVLKDNDLDVKYGKIHLGSQKAAFVEAA 178          
BLAST of mRNA_E-fasciculatus_F_contig12303.1778.1 vs. uniprot
Match: A0A6H5JMY7_9PHAE (PIPK domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMY7_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 1.230e-112
Identity = 180/285 (63.16%), Postives = 213/285 (74.74%), Query Frame = 1
Query:    1 QPVYLQDIDFATAGGVATAADVLVKQARNRVRINRLKEGQAKGRHTVPDEKGDEKRLKLTIRMMLGVRVAVGRQCNPLDQPGAEISEEAFSQAGVDKYTFPPAGATGRMATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEESAYMLSVAGNYDYLELITNSKSGSFFFYSHDQKYIIKAMKRAEAKFFRKILPKYYAHHLAHPGSFLIRFCGMYLVKNGHKKIPFIVMKCVEGDTNKTIHSKYDLKGSSLGRSAKEGEKVLKDNDLDVKYGKIHLGSQKAAFVEV 855
            +PV++ DI         +   + V +AR+RVR+ RLK G    R+   DEK D+++L LT RMMLGVRVAVGRQ +P    G  ++ + ++Q   DKY FPPAGA GR+ TPSHKLN+TFKFRDYAPK FK LR  FGI+E+ YM SVAG+YDYLELITNSKSGSFFFYSHDQKYIIK MKRAEAKFFR ILP+YY HH  HP S LIRFCGMYLVK GH+KIPFIVMKC++G     IH KYDLKGS + R+AKEGEKVLKDN+L     K  LGSQ+ AF++V
Sbjct:   41 KPVFMNDIRLGPKD--ESFEHIQVHEARSRVRVGRLKYG----RNVKADEKADDEKLNLTFRMMLGVRVAVGRQASPFSSEG--LTADDYTQQ--DKYVFPPAGAGGRLPTPSHKLNRTFKFRDYAPKVFKNLRGLFGIDEALYMNSVAGDYDYLELITNSKSGSFFFYSHDQKYIIKNMKRAEAKFFRSILPQYYEHHRTHPDSVLIRFCGMYLVKKGHRKIPFIVMKCIDGTAQMKIHKKYDLKGSKVHRTAKEGEKVLKDNNLREAKTKFRLGSQRDAFLKV 315          
BLAST of mRNA_E-fasciculatus_F_contig12303.1778.1 vs. uniprot
Match: A0A6H5KUU1_9PHAE (PIPK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU1_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 5.580e-96
Identity = 175/297 (58.92%), Postives = 215/297 (72.39%), Query Frame = 1
Query:    7 VYLQDIDFATAGGVATAADVLVKQARNRVRINRLKEGQA--KGRHTVPDEK----------GDEKRLKLTIRMMLGVRVAVGRQCNPLDQPGAEISEEAFSQAG-VDKYTFPPAGATGRMATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEESAYMLSVAGNYDYLELITNSKSGSFFFYSHDQKYIIKAMKRAEAKFFRKILPKYYAHHLAHPGSFLIRFCGMYLVKNGH--KKIPFIVMKCVEGDTNKTIHSKYDLKGSSLGRSAKEGEKVLKDNDLDVKYGKIHLGSQKAAFVE 852
            +YL DIDF  A G ATA D+LV+Q R RVR+ R+K+     K R T P  +           DE    LTI MMLG+RVAVGRQ NPL +P  E++ E F QA  VDKYTFPP+GATG + TPSHKL +TFKF+DYAPK FKK+R+HFG+++  YMLSVAGNY++LE I+N+KSG FFF+SHD++++IK MK +E KF R+ILP YY H   HP +FL+RF GMY VK  H  KK+ FIVM  V  DT K IH+ YDLKGSSLGR AK GEKVLKDNDL  + GK+HLGSQ+ AF++
Sbjct:  670 IYLGDIDF-DAPGEATATDILVRQHRTRVRVKRVKDKGTTRKKRRTKPKRRIRSGKPLHPEEDEVEYILTIGMMLGLRVAVGRQANPLAKP--ELTVEDFYQARCVDKYTFPPSGATGYLVTPSHKLGRTFKFKDYAPKVFKKIREHFGVDKMRYMLSVAGNYNFLEFISNAKSGEFFFFSHDERFMIKTMKSSETKFLRRILPHYYEHVKVHPETFLVRFYGMYRVKMHHLNKKVHFIVMNSVL-DTYKEIHNTYDLKGSSLGRDAKPGEKVLKDNDLAERQGKLHLGSQREAFLK 962          
BLAST of mRNA_E-fasciculatus_F_contig12303.1778.1 vs. uniprot
Match: D8LKC9_ECTSI (PIPK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKC9_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 1.860e-60
Identity = 154/398 (38.69%), Postives = 200/398 (50.25%), Query Frame = 1
Query:    7 VYLQDIDFATAGGVATAADVLVKQARNRVRINRLKEGQA--KGRHTVPDEK----------GDEKRLKLTIRMMLGVRVAVGRQCNPLDQPGAEISEEAFSQAGVDKYTFPPAGATGRMATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEES----------------------------------------------------------------------------AYMLSVAGNYDYLELITNSKSGSFFFYS----------HDQK--------------YIIKAMKRAEAKFFRKILPKYYAHHLAHPGSFLIRFCGMYLVKNGH--KKIPFIVMKCVEGDTNKTIHSKYDLKGSSLGRSAKEGEKVLKDNDLDVKYGKIHLGSQKAAFVEVS 858
            +YL DIDF  A G ATA D+LV+Q R RVR+ R+K+     K R T P  +           DE    LTI MMLG+RVAVGRQ NPL +P  E++ E F Q  VDKYTFPP+GATG + TPSHKL +TFKF+DYAPK FKK+R+HFG+++                                                                             A++++   +YD  +    +K+ +    +          H++                +    + +E KF R+ILP YY H   HP +FL+RF GMY VK  H  KK+ FIVM  V  DT K IH+ YDLKGSSLGR AK GEKVLKDNDL  + GK+HLGSQ+ AF++V+
Sbjct:  298 IYLGDIDF-DAPGEATATDILVRQHRTRVRVKRVKDKGTTRKKRRTKPKRRIRSGKPLHPEEDEVEYILTIGMMLGLRVAVGRQANPLAKP--ELTVEDFYQ--VDKYTFPPSGATGYLVTPSHKLGRTFKFKDYAPKVFKKIREHFGVDKPDDIPTVMTSHIAVWKHYKDTKVVRLDVGAMFAAAGRGFRPGWGGGGRRQNYICNGVKGGCRADVRARKQQSEEFKVAFVVAEYNDYDCSDGKVGAKAAALTGLASACQHGEQPEHEEHGPEKRPQAHLEPGVLLWSPFQSSETKFLRRILPHYYEHVKVHPETFLVRFYGMYRVKMHHLNKKVHFIVMNSVL-DTYKEIHNTYDLKGSSLGRDAKPGEKVLKDNDLAERQGKLHLGSQREAFLKVA 689          
BLAST of mRNA_E-fasciculatus_F_contig12303.1778.1 vs. uniprot
Match: A0A4D9DCS9_9STRA (PIPK domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCS9_9STRA)

HSP 1 Score: 194 bits (492), Expect = 3.040e-53
Identity = 116/243 (47.74%), Postives = 156/243 (64.20%), Query Frame = 1
Query:  151 KGDEKRLKLTIRMMLGVRVAVGRQCNPLDQPGAEISEEAFSQAGVDKYTFPPAGATGRM-ATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEESAYMLSVAGNYDYLELITNSKSGSFFFYSHDQKYIIKAMKRAEAKFFRKILPKYYAHHLAHPGSFLIRFCGMYLVKNGH--KKIPFIVMKCVEGDTNKTIHSKYDLKGSSLGRSA------KEGEKVLKDNDLDVKYGKIHLGSQKAAFVE 852
            KG+ ++  LTI MMLG+RVAVGR      Q   +++   F Q  VDKY FPP G       TP H L+  FKF+DYAPK F ++RQ FG++ ++YMLSV+GNY+YLE ++NSKSG FFFYSHD +++IK     E KF RKILP YY +   +P + L RF GM+ VK  H  +K+ F++M  V  DT + I+  YDLKGS++GRS+      KEG  V KD DL   + K  LG+++  F+E
Sbjct:  202 KGEHEQYTLTIGMMLGIRVAVGRP-----QQMDDLTLMDFMQ--VDKYLFPPKGCNKPPHRTPPHHLSHDFKFKDYAPKIFHRIRQLFGVDSASYMLSVSGNYNYLEFMSNSKSGQFFFYSHDGRFMIKTQTSEENKFLRKILPHYYQYVSLNPNTLLTRFYGMHRVKMRHLKRKVHFVIMHSVF-DTKEKIYRIYDLKGSTVGRSSGPDKARKEGV-VYKDLDLVDDHTKFQLGTKRRLFME 435          
BLAST of mRNA_E-fasciculatus_F_contig12303.1778.1 vs. uniprot
Match: A0A7R9YC01_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC01_9STRA)

HSP 1 Score: 190 bits (482), Expect = 7.540e-52
Identity = 111/241 (46.06%), Postives = 148/241 (61.41%), Query Frame = 1
Query:  154 GDEKRLKLTIRMMLGVRVAVGRQCNPLDQPGAEISEEAFSQAGVDKYTFPPAGAT-GRMATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEESAYMLSVAGNYDYLELITNSKSGSFFFYSHDQKYIIKAMKRAEAKFFRKILPKYYAHHLAHPGSFLIRFCGMYLVKNGH--KKIPFIVMKCVEGDTNKTIHSKYDLKGSSLGRSAKEGEK----VLKDNDLDVKYGKIHLGSQKAAFVEV 855
            G  ++  L + MM  +R  +GR+  P  +  A +    F+   VDKY FPP G   G + TP H L  TFKF+DY+P  F+ +R+   IE+ +YMLSV GN +++E I NSKSG FFFYSHD KY+IK     E KF R+ILP YYAH  ++P S + RF GM+ VK  H  +K+ F+VM  V   T + IH+ YDLKGS +GR A   E+    VLKDNDL     KI LG +KA F+++
Sbjct:   88 GQHEQYTLALGMMHALRTVIGRRTAPTQR--AHLISSDFTS--VDKYVFPPNGVLRGPLPTPPHNLAHTFKFKDYSPLVFRAIRELSNIEDDSYMLSVCGNRNFIEFIPNSKSGQFFFYSHDGKYMIKTQTSEENKFLRRILPHYYAHLRSNPDSLMTRFYGMHRVKMYHLRRKVHFVVMGSVFNTTER-IHTIYDLKGSRVGREATAEERKNGGVLKDNDLVADGKKIVLGPKKARFLDI 323          
BLAST of mRNA_E-fasciculatus_F_contig12303.1778.1 vs. uniprot
Match: A0A7S2RMD3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMD3_9STRA)

HSP 1 Score: 181 bits (460), Expect = 4.320e-51
Identity = 107/237 (45.15%), Postives = 152/237 (64.14%), Query Frame = 1
Query:  154 GDEKRLKLTIRMMLGVRVAVGRQCNPLDQPGAEISEEAFSQAGVDKYTFPPAGAT--GRMATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEESAYMLSVAGNYDYLELITNSKSGSFFFYSHDQKYIIKAMKRAEAKFFRKILPKYYAHHLAHPGSFLIRFCGMYLVKNGH--KKIPFIVMKCVEGDTNKTIHSKYDLKGSSLGRSA----KEGEKVLKDNDLDVKYGKIHLGSQKA 840
            G  ++  +TI MM+G+RV+VGR+ N +  P   +    F++A  DKY FPP G+   GR+ TP H L  TFKF+DYAPK FK +R+ + ++ ++YMLSV G++++++ I NS+SG FFFYSHD  Y+IK   + E KF R+ILP YY +   +P S + RF GM+ VK  H  +K+ F+VM+ V  DT + IH+ YDLKGS+ GR A    +E   VLKD DL        LG ++A
Sbjct:  112 GQHEQYIMTIGMMIGIRVSVGRE-NNITTP---LLVREFNRA--DKYIFPPRGSNRNGRI-TPPHSLQHTFKFKDYAPKVFKSIREMYNVDAASYMLSVCGDFNFIQFIANSRSGQFFFYSHDGSYMIKTQTKEENKFLRRILPSYYKYLSQNPNSLITRFYGMHRVKMYHLRRKVHFVVMQSVF-DTAEKIHTMYDLKGSTHGRQASIKDRETGGVLKDLDLVSDAKMFKLGPKRA 340          
BLAST of mRNA_E-fasciculatus_F_contig12303.1778.1 vs. uniprot
Match: A0A7S1XT07_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XT07_9STRA)

HSP 1 Score: 180 bits (457), Expect = 9.540e-50
Identity = 108/242 (44.63%), Postives = 144/242 (59.50%), Query Frame = 1
Query:  175 LTIRMMLGVRVAVGRQCNPLDQPGAEISEEAFSQAG---------VDKYTFPPAGATGR-MATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEESAYMLSVAGNYDYLELITNSKSGSFFFYSHDQKYIIKAMKRAEAKFFRKILPKYYAHHLAHPGSFLIRFCGMYLVKNGH--KKIPFIVMKCVEGDTNKTIHSKYDLKGSSLGRSAKEGE----KVLKDNDLDVKYGKIHLGSQKAAFVE 852
            LT  MMLG+RV+VGR     D     I+ E  S++          +DK  FPP G T     TP HKL+  FKF+DY+PK F+ +R+HFGI+ES YMLS+AG+++++E I NS SG FFFYSHD +Y+IK M++AE K  R +LP YY H      + + RF GM+ VK  H  K + F++M  V   T   IH  YDLKGS++GR   E E    KV KD DL     ++ LG  +  F+E
Sbjct:   98 LTYGMMLGIRVSVGRLAME-DHRRQTIASERTSESDDVVDADFEHIDKLLFPPEGNTRPPFITPPHKLHTAFKFKDYSPKIFRAIRKHFGIDESDYMLSLAGDFNFIEFIANSHSGQFFFYSHDGRYMIKTMEKAECKLLRDLLPDYYNHIKNQRQTLMTRFYGMHRVKMRHISKVMHFVIMGSVF-HTGLPIHVSYDLKGSTVGRMVSEEERAKGKVRKDQDLLKDERRLQLGPMRETFIE 337          
BLAST of mRNA_E-fasciculatus_F_contig12303.1778.1 vs. uniprot
Match: A0A836CAN4_9STRA (PIPK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAN4_9STRA)

HSP 1 Score: 184 bits (468), Expect = 3.520e-49
Identity = 115/302 (38.08%), Postives = 150/302 (49.67%), Query Frame = 1
Query:  151 KGDEKRLKLTIRMMLGVRVAVGRQCNPLDQPGAEISE-------------------------------------------EAFSQAGVDKYTFPPAGATGRMATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEE----------------------SAYMLSVAGNYDYLELITNSKSGSFFFYSHDQKYIIKAMKRAEAKFFRKILPKYYAHHLAHPGSFLIRFCGMYLVKNGH--KKIPFIVMKCVEGDTNKTIHSKYDLKGSSLGRSAKEGEKVLKDNDLDVKYGKIHLGSQKAAFVEV 855
            K D   + LT+ MMLG+RVAVGRQ NP+++    +++                                                  VDKY FPP+GA G M TP HKL  TFKF+DYAPK  K++ +HFG +                         YMLSVAGNY +LE ITN++SG FFFYSHD+ ++IK MK+AE +F R+ILP YY H   HP +FL+RFCGMY VK  H  +K+ F+VM  V  DT+K +    DL  S                       K+HLG Q+ AF++V
Sbjct:  312 KNDPDSMLLTLGMMLGLRVAVGRQENPMERQELTVTDFYXXXXXXXXXXXXXXXYQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVDKYVFPPSGAMGVMVTPPHKLGHTFKFKDYAPKVSKRVHEHFGRDRVLSAXXXXXXXXXXXXXXXXXXMRYMLSVAGNYQFLEFITNARSGQFFFYSHDESFMIKTMKKAETRFLRRILPHYYEHIRRHPDTFLVRFCGMYRVKMHHINRKVHFMVMSSVY-DTHKDVGKDLDLVRSG---------------------NKLHLGRQREAFLKV 591          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12303.1778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLT5_ECTSI1.110e-19297.55PIPK domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KVE7_9PHAE9.850e-11998.31PIPK domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JMY7_9PHAE1.230e-11263.16PIPK domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6H5KUU1_9PHAE5.580e-9658.92PIPK domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LKC9_ECTSI1.860e-6038.69PIPK domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A4D9DCS9_9STRA3.040e-5347.74PIPK domain-containing protein n=1 Tax=Nannochloro... [more]
A0A7R9YC01_9STRA7.540e-5246.06Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2RMD3_9STRA4.320e-5145.15Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S1XT07_9STRA9.540e-5044.63Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A836CAN4_9STRA3.520e-4938.08PIPK domain-containing protein n=1 Tax=Tribonema m... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12303contigE-fasciculatus_F_contig12303:953..4074 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score551.6
Seed ortholog evalue2.2e-154
Seed eggNOG ortholog2880.D8LLT5
KEGG rclassRC00002,RC00078
KEGG koko:K00889
KEGG ReactionR03469
KEGG Pathwayko00562,ko01100,ko04011,ko04070,ko04072,ko04139,ko04144,ko04666,ko04810,ko05231,map00562,map01100,map04011,map04070,map04072,map04139,map04144,map04666,map04810,map05231
KEGG ModuleM00130
EggNOG free text desc.Translation initiation factor IF-2, N-terminal region
EggNOG OGsCOG5253@1,KOG0229@2759
EC2.7.1.68
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPhosphatidylinositol-4-phosphate 5-kinase
Ec32 orthologEc-02_002790.1
Exons6
Model size858
Cds size858
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12303.1778.1prot_E-fasciculatus_F_contig12303.1778.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12303 953..4074 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927737.8244612-CDS-E-fasciculatus_F_contig12303:952..10781622927737.8244612-CDS-E-fasciculatus_F_contig12303:952..1078Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12303 953..1078 +
1695995673.2376432-CDS-E-fasciculatus_F_contig12303:952..10781695995673.2376432-CDS-E-fasciculatus_F_contig12303:952..1078Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12303 953..1078 +
1622927737.840044-CDS-E-fasciculatus_F_contig12303:1537..16931622927737.840044-CDS-E-fasciculatus_F_contig12303:1537..1693Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12303 1538..1693 +
1695995673.2501059-CDS-E-fasciculatus_F_contig12303:1537..16931695995673.2501059-CDS-E-fasciculatus_F_contig12303:1537..1693Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12303 1538..1693 +
1622927737.8573594-CDS-E-fasciculatus_F_contig12303:2032..21731622927737.8573594-CDS-E-fasciculatus_F_contig12303:2032..2173Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12303 2033..2173 +
1695995673.2621026-CDS-E-fasciculatus_F_contig12303:2032..21731695995673.2621026-CDS-E-fasciculatus_F_contig12303:2032..2173Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12303 2033..2173 +
1622927737.8714588-CDS-E-fasciculatus_F_contig12303:2628..27481622927737.8714588-CDS-E-fasciculatus_F_contig12303:2628..2748Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12303 2629..2748 +
1695995673.2759676-CDS-E-fasciculatus_F_contig12303:2628..27481695995673.2759676-CDS-E-fasciculatus_F_contig12303:2628..2748Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12303 2629..2748 +
1622927737.8850982-CDS-E-fasciculatus_F_contig12303:3300..34461622927737.8850982-CDS-E-fasciculatus_F_contig12303:3300..3446Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12303 3301..3446 +
1695995673.2862806-CDS-E-fasciculatus_F_contig12303:3300..34461695995673.2862806-CDS-E-fasciculatus_F_contig12303:3300..3446Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12303 3301..3446 +
1622927737.8964453-CDS-E-fasciculatus_F_contig12303:3905..40741622927737.8964453-CDS-E-fasciculatus_F_contig12303:3905..4074Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12303 3906..4074 +
1695995673.2964194-CDS-E-fasciculatus_F_contig12303:3905..40741695995673.2964194-CDS-E-fasciculatus_F_contig12303:3905..4074Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12303 3906..4074 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12303.1778.1

>prot_E-fasciculatus_F_contig12303.1778.1 ID=prot_E-fasciculatus_F_contig12303.1778.1|Name=mRNA_E-fasciculatus_F_contig12303.1778.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=286bp
QPVYLQDIDFATAGGVATAADVLVKQARNRVRINRLKEGQAKGRHTVPDE
KGDEKRLKLTIRMMLGVRVAVGRQCNPLDQPGAEISEEAFSQAGVDKYTF
PPAGATGRMATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEESAYMLSVAG
NYDYLELITNSKSGSFFFYSHDQKYIIKAMKRAEAKFFRKILPKYYAHHL
AHPGSFLIRFCGMYLVKNGHKKIPFIVMKCVEGDTNKTIHSKYDLKGSSL
GRSAKEGEKVLKDNDLDVKYGKIHLGSQKAAFVEVS
back to top

mRNA from alignment at E-fasciculatus_F_contig12303:953..4074+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12303.1778.1 ID=mRNA_E-fasciculatus_F_contig12303.1778.1|Name=mRNA_E-fasciculatus_F_contig12303.1778.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3122bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12303:953..4074+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGCCTGTTTATCTACAAGACATCGACTTCGCGACGGCAGGGGGGGTGGC CACCGCGGCAGACGTGCTCGTCAAGCAGGCGCGCAACCGAGTGCGCATCA ACCGCCTCAAGGAAGGCCAGGCCAAGGTGAGACAGAGGAGACAATAAAAT CGATATCCCGGTCATGTTGATGGGTGGGACTGTTTAGTTTTTTAACTCAA CGCGACGGGCGGGATATACTTCACGCCGATTTTGGAAAGGAAGGTGGAGT ATCTCTCGCTGATGGCTGTGTAGCGGATAAGGGAAAGGCCCATCGGTACC ACTACCGCCGTCTGTGCCGTGCACACATGAGTGTTCCCAAAGGCAGGCAG CAGCTATTGGTGTTGCATTGATTGGTTGTGTTGGTGGTGATGCGTCCTTG AATTTTTGTGGCTCGTTCGTATCAGACCGTGCTGCTTGCTCGTTTGCTTG TATCTACTTCACGATCGGTTCAACTATAGGCTGTTTTGTTTTGTGCTTCA TCGCGTGTGGTTTGACTGGCGGCCGGACCACCGGTCGGCCAATATAACAA ACAAACAATTTGCCGTTTCGCGCGTTCGTGACCAGGGTCGACACACCGTG CCGGACGAGAAGGGAGACGAGAAGAGGCTCAAGCTCACGATCCGGATGAT GCTAGGCGTCAGGGTGGCGGTGGGGAGACAGTGCAACCCGCTCGATCAGC CCGGAGCAGAAATTTCGGAGGAGGCGTTTTCACAGGCGGGTGTGGTTGCG TGCTGCAGCGGTGGTAGTTGCGATGGCGGTTTGGCATGGTGATAGTGGTG GTGGTGGTGGTGGTGTGGTGCTGCTGTTGCGGCTAGAGGTGGTGTTGCCG TCGGCGTTGTTCACGTTGCCGCTGGTATTCCCAAGCCGTTTGCCGTGTCT TTTTGGAGCCTCCCTTGTCAGAGGCGGCCGGTGGTTGGCATCTATTGTAT GGCTTTTGTGGCAGGAGAAAAGGTAGGAAGCGTTTCTCCTTTCCTCCTTT CCTTGCTTGACACGGAGACCATGTCCCCCTCCACAAATCAAGACGAGAGC GGCATTTTTCTTGAATAAATGAAAAAACAGGTGGACAAGTACACGTTTCC CCCGGCAGGGGCAACGGGACGGATGGCGACGCCCTCTCACAAGCTTAACA AGACATTTAAGTTCAGGGACTACGCGCCGAAGGCCTTCAAGAAGCTCAGG CAGCACTTCGGCATCGAGGAGGTGTGTGTGTGTGTGTGTGTGTGTTGGTG TGTTTTATTTTACTTTCAGCATCGATCGCGCTAACCGGCTGACCAATGAG CGGGCGTCAGTCTCAATGCGGTTGAAAACAGAACATGCTTCTGAAGGCCA TGATCTGGCGTTTGGGTTTGGGTTTGGTCAATCCTACGAAGGCATCACTT TGTGCGACGAGACGACGAGCGGCGGGCGCCCCGCCGCCTCCCGCAACCAA TCCTGCCGTTTTCTCTTGGACGTCATGGCCGTCCCGAGATGTACCAGGAG GCAGAAAATCTCCGATTACATTCGGAGTCAGTCGATCCTCTCGTCTAACG GGGTGCTGTTGTAGTCGCCCATGGGTCAAAAGGGCCAGGACTGCGTCATT TCCTCGCATGCACAAGCACGGTGTTCTTCGACAAGTCCCCCGCCGTGCTG TCCCTTTTTTTTGTTTTTGTGTGTAGTCGGCGTACATGCTCTCCGTGGCC GGCAACTACGACTACCTGGAGCTGATCACCAACTCCAAGTCGGGCAGCTT CTTCTTCTACTCTCACGACCAGAAGTACATCATCAAGGCTATGAAGGTAG GAGGGAGGGCAGGCGTACGCGTACTTTATGCTCCCTTTTGCCACAAAGAG AGAGCTAACCGCTCGAGTTAGATTGTTTTTCTTTTTGTAGGATTGGTCCG CTATCGTTGCCGCCTTCCGGGTACCTATTCAGTGTGTGTGAGGCATCGTT TCTGTTGGGGTGCTGTTTTGTGTTTTTTTCGCGAGGGGGGTTCACTGGTA CCCCGTCTTGTGCTGTGGTCGGCCGCACCCCAACCTTCAGCGATCTTGTT GCCAGCCAGTGCGTATCACTACGTACTGCTGTCTCGGCATTCGGGCCGCA CACGAGCAATTTTTTTGTCCCCCCCCCAATGATATGTAGGCAATTTATCC CAGATCGCAACCAGACTGCACCTTCCTTCTGTGAGTCCCGTCCCGTGTTT CGCATCGGTTCCATGTTGCTGCATCCTTCCTTTTTGGTGATCTCACGACG CCATGCGGCGCTCTTTCCGTTGTTGTTTCTTTACTCCTGCTCCTGCTGTT GTCGTTCTTTCCCGCACGGTACATATCCACAAAAAATATTAAAAAAAGCG TGCTGAGGCCAAGTTTTTCCGCAAGATCCTGCCCAAGTACTACGCGCACC ACCTCGCCCACCCTGGATCGTTCCTCATCCGCTTCTGCGGGATGTATCTG GTCAAGAATGGCCACAAGAAGATCCCATTCATCGTCATGAAGTGGTGAGA CGCGGTGCCTGCGCGGGGGGGGGGGTTCTGTGCAACATGTGGGGGGTGGG GTGTACGCAGGTCTGTCTGTCCGCGTCTCTTTTGGATTGTGTTAGTTGGA TGCACCTGTGTGAAGTTCGTCAGAGGACGCCCCTTCCCTTCTGGTTGTGC AGACGAGAAGAACATCATCAGCTGCTGGCTGGCCGGCTGGCTGTCTCCTG TGTGGAGGTCCGCACAGGTTTTGTTCTGTTTTGTTCTGTTGTTCTGTTCT GTTCTGTTTTGTTTTGTTCTGCCCTCCTCGCCCTAAGCCTTGCCGTTGTG CAGGGAAGGGAAACACCTTGTGACACTTCTGTGGTGTTTTGTGCGCTACT ACAATATGTACATATGCCCCGCTCAAAGTCGTCCTCTCTCCCCTATTCGC TCGATACACGTGACATGGCGTGATGTGTGATGTGTGATGTGTGATGTGAA CAGCGTGGAGGGGGACACCAACAAGACGATCCATTCCAAGTACGACCTCA AGGGGAGCAGCCTGGGTCGTTCGGCCAAGGAAGGGGAGAAGGTCCTCAAG GATAACGACCTCGATGTCAAGTACGGGAAGATACACCTCGGCTCCCAGAA GGCCGCGTTTGTCGAGGTCAGT
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12303:953..4074+

>mRNA_E-fasciculatus_F_contig12303.1778.1 ID=mRNA_E-fasciculatus_F_contig12303.1778.1|Name=mRNA_E-fasciculatus_F_contig12303.1778.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1716bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12303:953..4074+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGCCTGTTTATCTACAAGACATCGACTTCGCGACGGCAGGGGGGGTGGC
CACCGCGGCAGACGTGCTCGTCAAGCAGGCGCGCAACCGAGTGCGCATCA
ACCGCCTCAAGGAAGGCCAGGCCAAGCAGCCTGTTTATCTACAAGACATC
GACTTCGCGACGGCAGGGGGGGTGGCCACCGCGGCAGACGTGCTCGTCAA
GCAGGCGCGCAACCGAGTGCGCATCAACCGCCTCAAGGAAGGCCAGGCCA
AGGGTCGACACACCGTGCCGGACGAGAAGGGAGACGAGAAGAGGCTCAAG
CTCACGATCCGGATGATGCTAGGCGTCAGGGTGGCGGTGGGGAGACAGTG
CAACCCGCTCGATCAGCCCGGAGCAGAAATTTCGGAGGAGGCGTTTTCAC
AGGCGGGTGGTCGACACACCGTGCCGGACGAGAAGGGAGACGAGAAGAGG
CTCAAGCTCACGATCCGGATGATGCTAGGCGTCAGGGTGGCGGTGGGGAG
ACAGTGCAACCCGCTCGATCAGCCCGGAGCAGAAATTTCGGAGGAGGCGT
TTTCACAGGCGGGTGTGGACAAGTACACGTTTCCCCCGGCAGGGGCAACG
GGACGGATGGCGACGCCCTCTCACAAGCTTAACAAGACATTTAAGTTCAG
GGACTACGCGCCGAAGGCCTTCAAGAAGCTCAGGCAGCACTTCGGCATCG
AGGAGGTGGACAAGTACACGTTTCCCCCGGCAGGGGCAACGGGACGGATG
GCGACGCCCTCTCACAAGCTTAACAAGACATTTAAGTTCAGGGACTACGC
GCCGAAGGCCTTCAAGAAGCTCAGGCAGCACTTCGGCATCGAGGAGTCGG
CGTACATGCTCTCCGTGGCCGGCAACTACGACTACCTGGAGCTGATCACC
AACTCCAAGTCGGGCAGCTTCTTCTTCTACTCTCACGACCAGAAGTACAT
CATCAAGGCTATGAAGTCGGCGTACATGCTCTCCGTGGCCGGCAACTACG
ACTACCTGGAGCTGATCACCAACTCCAAGTCGGGCAGCTTCTTCTTCTAC
TCTCACGACCAGAAGTACATCATCAAGGCTATGAAGCGTGCTGAGGCCAA
GTTTTTCCGCAAGATCCTGCCCAAGTACTACGCGCACCACCTCGCCCACC
CTGGATCGTTCCTCATCCGCTTCTGCGGGATGTATCTGGTCAAGAATGGC
CACAAGAAGATCCCATTCATCGTCATGAAGTGCGTGCTGAGGCCAAGTTT
TTCCGCAAGATCCTGCCCAAGTACTACGCGCACCACCTCGCCCACCCTGG
ATCGTTCCTCATCCGCTTCTGCGGGATGTATCTGGTCAAGAATGGCCACA
AGAAGATCCCATTCATCGTCATGAAGTGCGTGGAGGGGGACACCAACAAG
ACGATCCATTCCAAGTACGACCTCAAGGGGAGCAGCCTGGGTCGTTCGGC
CAAGGAAGGGGAGAAGGTCCTCAAGGATAACGACCTCGATGTCAAGTACG
GGAAGATACACCTCGGCTCCCAGAAGGCCGCGTTTGTCGAGGTCAGTCGT
GGAGGGGGACACCAACAAGACGATCCATTCCAAGTACGACCTCAAGGGGA
GCAGCCTGGGTCGTTCGGCCAAGGAAGGGGAGAAGGTCCTCAAGGATAAC
GACCTCGATGTCAAGTACGGGAAGATACACCTCGGCTCCCAGAAGGCCGC
GTTTGTCGAGGTCAGT
back to top