mRNA_E-fasciculatus_F_contig12293.1768.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12293.1768.1
Unique NamemRNA_E-fasciculatus_F_contig12293.1768.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12293.1768.1 vs. uniprot
Match: D7G890_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G890_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 2.950e-74
Identity = 131/155 (84.52%), Postives = 140/155 (90.32%), Query Frame = 1 
Query:  274 MADVAMIVLGVMAQIRDLAKDIKENDRQACRLLDRVKAIEPAVLAVKQGTTTSSSESLRQLLETVDTIRNFLEGYARMSNFNRALKRKSNASEFTQLSVHITEGMQALQLDVAVDTWAKEDAEDRLGDLENMVDILERMERNRTENHAQILRVLK 738
            MADVA+IVLGVMAQIRD AKDIKENDRQACRL++RVKAIEPAVLAVKQGT  SSSESLRQLL TV+ IRNFL GYARMSNFNRALKRKSNASEFTQ  +HI EG+QAL LD+AVD WAKEDA DRL DLENMVD +ERMERNRTENHA+IL VLK
Sbjct:    1 MADVAVIVLGVMAQIRDFAKDIKENDRQACRLIERVKAIEPAVLAVKQGTNMSSSESLRQLLGTVEMIRNFLGGYARMSNFNRALKRKSNASEFTQFGIHINEGVQALSLDIAVDAWAKEDAADRLDDLENMVDTMERMERNRTENHAEILGVLK 155
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12293.1768.1 vs. uniprot
Match: D7G887_ECTSI (Protein kinase, TKL group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G887_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 3.470e-74
Identity = 127/155 (81.94%), Postives = 139/155 (89.68%), Query Frame = 1 
Query:  274 MADVAMIVLGVMAQIRDLAKDIKENDRQACRLLDRVKAIEPAVLAVKQGTTTSSSESLRQLLETVDTIRNFLEGYARMSNFNRALKRKSNASEFTQLSVHITEGMQALQLDVAVDTWAKEDAEDRLGDLENMVDILERMERNRTENHAQILRVLK 738
            MADVA+IVLGVMAQIRD+ KDIKENDRQACRL++RVKAI+PAVLAVKQGT TSSS+SL QLL TVD IRNFLEGYA+MS FNRALKRK+NASEFTQ  V +TEG+Q L LDVAVD WAKEDA DRL DLENMVDI+ERMERNRTEN A+IL VLK
Sbjct:    1 MADVAVIVLGVMAQIRDIVKDIKENDRQACRLIERVKAIQPAVLAVKQGTNTSSSDSLSQLLATVDMIRNFLEGYAQMSKFNRALKRKANASEFTQFGVLLTEGVQTLSLDVAVDAWAKEDAADRLDDLENMVDIMERMERNRTENQAEILGVLK 155
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12293.1768.1 vs. uniprot
Match: A0A6H5JLJ5_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLJ5_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 7.650e-57
Identity = 108/155 (69.68%), Postives = 130/155 (83.87%), Query Frame = 1 
Query:  274 MADVAMIVLGVMAQIRDLAKDIKENDRQACRLLDRVKAIEPAVLAVKQGTTTSSSESLRQLLETVDTIRNFLEGYARMSNFNRALKRKSNASEFTQLSVHITEGMQALQLDVAVDTWAKEDAEDRLGDLENMVDILERMERNRTENHAQILRVLK 738
            MADVA+ VL V+ +IR++A+ IKENDRQA RL DRV AIEP V+AVK+G+  SSSESL +LL  V+ IRNFLEGYAR +NFNRALKRK+NA  F +LSV +TEGMQALQLD+AVD WA EDA DRL DLENM+DI+ERME NRT+NHA+++ VLK
Sbjct:    1 MADVAVAVLRVVTEIRNVAERIKENDRQARRLSDRVTAIEPPVIAVKKGSKMSSSESLHRLLFAVEEIRNFLEGYARTTNFNRALKRKANADSFAKLSVMLTEGMQALQLDIAVDAWATEDASDRLDDLENMMDIMERMESNRTDNHAEVMGVLK 155
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12293.1768.1 vs. uniprot
Match: A0A6H5K368_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K368_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 3.840e-56
Identity = 102/159 (64.15%), Postives = 129/159 (81.13%), Query Frame = 1 
Query:  259 LTSRAMADVAMIVLGVMAQIRDLAKDIKENDRQACRLLDRVKAIEPAVLAVKQGTTTSSSESLRQLLETVDTIRNFLEGYARMSNFNRALKRKSNASEFTQLSVHITEGMQALQLDVAVDTWAKEDAEDRLGDLENMVDILERMERNRTENHAQILRVL 735
            LT+  MADVA+++L V+ +IR +A+  +ENDRQA  L  RV A++P VLAV++GT  SSSE+LRQLL TV+ IRNFL GYA+ S FNRALKRK+NA +FTQL   +TE +QALQLDVAVD WAKEDA DRL DL+NMVD +ERMER+RT+NHA+++ VL
Sbjct:   10 LTAAPMADVAVVILHVVDEIRKVAEGTRENDRQA--LFKRVLAVQPPVLAVREGTKLSSSEALRQLLATVEKIRNFLGGYAQTSKFNRALKRKANADQFTQLGDILTEEVQALQLDVAVDAWAKEDASDRLADLDNMVDTMERMERSRTDNHAEVMSVL 166
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12293.1768.1 vs. uniprot
Match: D8LQ15_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ15_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 1.670e-54
Identity = 107/155 (69.03%), Postives = 125/155 (80.65%), Query Frame = 1 
Query:  274 MADVAMIVLGVMAQIRDLAKDIKENDRQACRLLDRVKAIEPAVLAVKQGTTTSSSESLRQLLETVDTIRNFLEGYARMSNFNRALKRKSNASEFTQLSVHITEGMQALQLDVAVDTWAKEDAEDRLGDLENMVDILERMERNRTENHAQILRVLK 738
            M DVA+++L V+A+I D+A+ I EN RQA RLL R  AIE  VLAV  GT  SSSESLRQL  TV+ IRNFLEGYAR +  NRALKRKSNA++FTQL V++TEGM ALQLDVAVD WA EDA DRL DLENMVD++E MERNRTENHA+++ VLK
Sbjct:    1 MVDVAVVILRVVAEIHDVAEGINENHRQARRLLKRAMAIETPVLAVHNGTILSSSESLRQLSATVENIRNFLEGYARTTKLNRALKRKSNAAKFTQLGVNLTEGMHALQLDVAVDAWANEDASDRLEDLENMVDMMEIMERNRTENHAEVMDVLK 155
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12293.1768.1 vs. uniprot
Match: A0A6H5JY67_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY67_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 1.160e-52
Identity = 97/155 (62.58%), Postives = 130/155 (83.87%), Query Frame = 1 
Query:  274 MADVAMIVLGVMAQIRDLAKDIKENDRQACRLLDRVKAIEPAVLAVKQGTTTSSSESLRQLLETVDTIRNFLEGYARMSNFNRALKRKSNASEFTQLSVHITEGMQALQLDVAVDTWAKEDAEDRLGDLENMVDILERMERNRTENHAQILRVLK 738
            M DVA++VL V+A++RD+A+D+ ENDRQACRLL R  AIE  VLAV+ GT+ +S++SLRQLL TV+ IRNFLE YARM+ FNRAL R+SNA+EF +L +++TEGMQAL L+VAVD WAKEDA DR  D+ENM+D++E ++RN+T+ HA+++ VLK
Sbjct:    1 MVDVAVVVLRVLAEVRDVAEDVMENDRQACRLLKRALAIEAPVLAVQNGTSLTSADSLRQLLTTVEKIRNFLEEYARMTKFNRALNRRSNAAEFMRLGLNLTEGMQALHLEVAVDVWAKEDASDRQEDIENMLDMMETVKRNQTDKHAEVMNVLK 155
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12293.1768.1 vs. uniprot
Match: A0A6H5KS20_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS20_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 4.780e-37
Identity = 85/157 (54.14%), Postives = 108/157 (68.79%), Query Frame = 1 
Query:  274 MADV---AMIVLGVMAQIRDLAKDIKENDRQACRLLDRVKAIEPAVLAVKQGTTTSSSESLRQLLETVDTIRNFLEGYARMSNFNRALKRKSNASEFTQLSVHITEGMQALQLDVAVDTWAKEDAEDRLGDLENMVDILERMERNRTENHAQILRVL 735
            MA+V   A+ +L V+A+IR +A+ I+END QA RL +RVKAI+P VLAVK G    S ESLRQL E ++ IRNFL GYAR +  NR  +R+SNAS F   S  ++EGMQALQ+DV VD WAK+D  DRL D+ N+     R ERNR +N A+  R L
Sbjct:   54 MAEVGVNAITILQVLAEIRGVAEGIQENDEQAHRLSERVKAIQPGVLAVKNGKRGVSPESLRQLFEALEAIRNFLHGYARSNFLNRIWRRRSNASRFRVFSHDLSEGMQALQMDVLVDVWAKQDVSDRLEDIANLKHEARRGERNRNDNRAEFSRAL 210
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12293.1768.1 vs. uniprot
Match: A0A6H5KGQ4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGQ4_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.820e-35
Identity = 85/157 (54.14%), Postives = 107/157 (68.15%), Query Frame = 1 
Query:  274 MADV---AMIVLGVMAQIRDLAKDIKENDRQACRLLDRVKAIEPAVLAVKQGTTTSSSESLRQLLETVDTIRNFLEGYARMSNFNRALKRKSNASEFTQLSVHITEGMQALQLDVAVDTWAKEDAEDRLGDLENMVDILERMERNRTENHAQILRVL 735
            MA+V   A+ VL V+A+IR +A+ I+END QA RL +RVKAI+P VLAVK G    S ESLRQL E ++ IRNFL GYAR +  NR  +R+SNAS F   S  +TEGMQALQ+DV VD WAK+D  DRL D+ N+   +   ERN + N A+  R L
Sbjct:    1 MAEVGVNAITVLQVVAEIRGVAEGIQENDEQAHRLSERVKAIQPGVLAVKNGKRGVSPESLRQLFEALEAIRNFLHGYARSNFLNRVWRRRSNASRFRAFSHDLTEGMQALQMDVLVDVWAKQDVSDRLEDIANLKHAMRIGERN-SNNRAEFSRAL 156
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12293.1768.1 vs. uniprot
Match: D7FYC4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYC4_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 2.080e-17
Identity = 52/113 (46.02%), Postives = 75/113 (66.37%), Query Frame = 1 
Query:  268 RAMADVAMIVLGVMAQIRDLAKDIKENDRQACRLLDRVKAIEPAVLAV-KQGTTTSSSESLRQLLETVDTIRNFLEGYARMSNFNRALKRKSNASEFTQLSVHITEGMQALQL 603
            +A+ ++  ++L  +  I  + + +KEN+R A +LL+ V+AIEP + A+ K+GTT S SESLRQLLETV  IR  L+ YAR     RALKRK  A +F  L  ++T+ M A+QL
Sbjct:   12 QAVVNIVELILECVDSIGSIVRGMKENNRHASQLLEIVEAIEPPIRAIQKKGTTLSGSESLRQLLETVQEIRTVLDEYARTCIVARALKRKKIAKKFAWLGNNLTQKMHAVQL 124
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12293.1768.1 vs. uniprot
Match: A0A6H5K2T5_9PHAE (PK_Tyr_Ser-Thr domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T5_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 3.780e-10
Identity = 47/92 (51.09%), Postives = 55/92 (59.78%), Query Frame = 1 
Query:  403 LAVKQGTTTSSSESLRQLLETVDTIRNFLEGYARMSNFNRALKRKSNASEFTQLSVHITEGMQALQLDVAVDTWAKEDAEDRLGDLENMVDI 678
            +A   GT TSSSE LR L  T+  IR  L   AR +NFNRALK+    S    +    +  +    LDVAVDTWA EDA DRL DLENM+DI
Sbjct:    1 MAEVAGTKTSSSEPLRLLFATLKVIRKILAENARTTNFNRALKQTPVNSHKPAIP---SPKICTRSLDVAVDTWANEDAADRLHDLENMLDI 89
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12293.1768.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G890_ECTSI2.950e-7484.52Protein kinase domain-containing protein n=1 Tax=E... [more]
D7G887_ECTSI3.470e-7481.94Protein kinase, TKL group n=1 Tax=Ectocarpus silic... [more]
A0A6H5JLJ5_9PHAE7.650e-5769.68Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A6H5K368_9PHAE3.840e-5664.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ15_ECTSI1.670e-5469.03Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5JY67_9PHAE1.160e-5262.58Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5KS20_9PHAE4.780e-3754.14Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5KGQ4_9PHAE1.820e-3554.14Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FYC4_ECTSI2.080e-1746.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K2T5_9PHAE3.780e-1051.09PK_Tyr_Ser-Thr domain-containing protein n=1 Tax=E... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12293contigE-fasciculatus_F_contig12293:56..3963 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score251.1
Seed ortholog evalue3.3e-64
Seed eggNOG ortholog2880.D7G890
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0192@2759
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size739
Cds size465
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12293.1768.1prot_E-fasciculatus_F_contig12293.1768.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12293 56..520 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927736.3359292-CDS-E-fasciculatus_F_contig12293:55..5201622927736.3359292-CDS-E-fasciculatus_F_contig12293:55..520Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12293 56..520 -
1695995672.2204254-CDS-E-fasciculatus_F_contig12293:55..5201695995672.2204254-CDS-E-fasciculatus_F_contig12293:55..520Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12293 56..520 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927736.3506603-UTR-E-fasciculatus_F_contig12293:520..5581622927736.3506603-UTR-E-fasciculatus_F_contig12293:520..558Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12293 521..558 -
1695995672.2339327-UTR-E-fasciculatus_F_contig12293:520..5581695995672.2339327-UTR-E-fasciculatus_F_contig12293:520..558Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12293 521..558 -
1622927736.3605275-UTR-E-fasciculatus_F_contig12293:3102..33111622927736.3605275-UTR-E-fasciculatus_F_contig12293:3102..3311Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12293 3103..3311 -
1695995672.250265-UTR-E-fasciculatus_F_contig12293:3102..33111695995672.250265-UTR-E-fasciculatus_F_contig12293:3102..3311Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12293 3103..3311 -
1622927736.3703287-UTR-E-fasciculatus_F_contig12293:3937..39631622927736.3703287-UTR-E-fasciculatus_F_contig12293:3937..3963Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12293 3938..3963 -
1695995672.2606814-UTR-E-fasciculatus_F_contig12293:3937..39631695995672.2606814-UTR-E-fasciculatus_F_contig12293:3937..3963Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12293 3938..3963 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12293.1768.1

>prot_E-fasciculatus_F_contig12293.1768.1 ID=prot_E-fasciculatus_F_contig12293.1768.1|Name=mRNA_E-fasciculatus_F_contig12293.1768.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=155bp
MADVAMIVLGVMAQIRDLAKDIKENDRQACRLLDRVKAIEPAVLAVKQGT
TTSSSESLRQLLETVDTIRNFLEGYARMSNFNRALKRKSNASEFTQLSVH
ITEGMQALQLDVAVDTWAKEDAEDRLGDLENMVDILERMERNRTENHAQI
LRVLK
back to top

mRNA from alignment at E-fasciculatus_F_contig12293:56..3963-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12293.1768.1 ID=mRNA_E-fasciculatus_F_contig12293.1768.1|Name=mRNA_E-fasciculatus_F_contig12293.1768.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3908bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12293:56..3963- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGCATGAGAGAAGTTGTCAACTTCAAGTAAGTGGCACATCTTTGCTTCTG
CCAGAGCTTCTGAGATCCCCGGGAAAATGCAGCGCCGCGTGCGGACCACG
AGAAAAATTCTCCTTGTCGACGGACAGACATTGAGACCACCAGATGTCGA
CCGAAAGGGGCTGCTGAGCTGCTACTACTGCTGCTGTGCTGTGTGTCGCC
AATTTGTCAGCTGCGCGCTACGTAGATGCTGAGTGAACGACAGCCGCGAA
CCACAACGTCCAACATTGTACAGTATAGTAGTCCACTTCTGGAAGATTGC
CCCGAACCTGTGCAGGAGGGAGAAAGATGAGAGGAACTCACATGATGGTA
TGCACGGACCAGACTCCCGAGTCCGAGTCGGCCGTTCTTGAGTGTTTCGA
TGCACACGCTGGTTACTGCTGCTGGCTGTCTCTTGTTGTGTCACACCAGT
GTCCAGGGCAACGGCGCGATATCAGACGATCAGACGTCGTCCTGGTCGCC
GGCTATGGGTGGTCAGCTCGCATGGCTCTGCTTGTCTGTTGTTGTTTTCT
CTTGTTGTGTGTTGGTTGGCGGAAAATTCTAAAAAATGGTGGGGGGGGGG
GGGTGCTTCAAAATATTTTCAATTCGCGTGCTCTCTTTGGTGCAACCAGC
AGAGGAAACAAAGCAACCAGCAGAGACAGAGAGCACGAACCAACGGACAG
CAGTAGCGACGTCTGATGCTGCGCCGTTGTGCGGGACACTGTTGCGACAT
ACATCAAGACAGCTTACAGCATAAACCGCCGAGAGCATTGAGACGCTCAA
GAAAAATCTACTCCCAGGTCCCCCGCTCGTCCGCCGTGACTGCTCGTGCG
TGTGCCGTCAGGTGAGTTCCTCTCATCTTCCTGCCTCCTTTGTTCGGTTG
TTCTGCAAAGGTTCGGTGCAATCTAACCAGAACAATGTCGGGCCTTCAGG
GTGCACAGCTGCCATGTTCTCAGTATCAACATAGCTCGCAGCTGGCAGTC
TTGCCGAGAGACAGCTGTGGTACATAGTGTCGGTCGAAAGTCTCGTGCGA
AATTGTCATGTGCGCTGAAAGACTCGCCGATTGAGAAGCAATTCCTCGCA
GCTGCATTTTCCACGGGTTTGCTGGAGCTCTGACAGAGACGACATACCCA
TGCAATATGCAACTAGGTTCGGGAGTTAGGTGGCTTGCCTCCCGGGGGTG
ACGCAAGAGCGCATGGAAACGCCTAATTTTGTTAGGGGCGTGCTGCAATG
TGCGGTAGTGCTCATGCCCGTATAAATAAACATCGCATTTATGTGTAATG
GGAAGGGAAATTCTGATATGAATGTTGCGTTGGGACCACCACAGCGATGA
TCTCGATCATCTCCGTTCCGTACCAGCAGTTGGATTCGCTACATATGAGA
GTTGCAGGTCTTAGGTGACGCTGCTGTATGTAGGTTTGTTGAGGGTGACC
ACCAATTTTAATGTATTCTGAATTTAACCGGCGGCGTTGTTTTTTTTTTC
GGCCGCGTTCGCGGCGGAAGTCTTGTTGTTGTTGGTGCGCGAGGTGGTGC
GAGCGATGGAGGAAGATGTATGCGGGGATGATATTGTGGTGTGTGAGTTG
TGTGAGCTGCTGGGTTATGGATTGTGGGAGGGTGAGCGAGAAGTACCTTT
GGGTGGATAATCGGGGTGACGTTCTTTTCGGGAGGCTCTTTCTTCATAAT
ATATGAATTTTTCACTGATTCCGCGGACCCTTTCGCGGACCTTTGAATTC
CTGTGGATTCCTGTGGATGGGCAATCGGTAAACTGGCGTTCTTTTCGGCG
GAGGTTTTCTTCGGTTCGTTAATACAATAAGCCCAGTGTCCAACTGTTTT
CTCCCTCACCCACTGCAAGGACTTCAACACATCCCGTTCGACTCTGGGCA
TTTTCTCGAGCGGGTAGTCCTGCTGTATTAAATAGCAGCCCTACGAAGCC
CCTGAATGTTCACGAAGTAGGCGAACCAGGAACGGAGTCAGATCGTCGAG
GTGACACGAACTCATGTATGCTGGATTGTGGTGTTGTGTTATTGTGTTTT
CGTGTGGGTCGGCCCTCGGTGGAGGCGATCGACCACAAAGGCAGCCCAGA
GCAAGTAACCCTGACTGTATACAGATTGCCGAAGGTGATACCTGATATTT
TTTGTCTTGTTTTTCCTAGTATTGACACAACGAATCCATCTCTTTCCATA
GATAGAAAAGTCTAGGATAGATTAGCAATGAATCCATAGCGTCAGCGGAA
GGCTACCTCGATTTCCACAGTTTCCCAGACAGCACACAGCTATATGTATT
ACCGACGATGCTTGCTTGCGGTCCGGTTTTTGACACCGTTAGGCGAACCG
TTTTCTGACGCTGTTTCCTGAAGTCGGCGGACCTCTCGACGGACCTATCG
TCCAGAATTAGAATTCCGGCGGGCCACCTGTTGACATTTGAAGTGTGTGC
GGCACGCATTCGTGCGCGGTGTGGCATTTTTTTTTTATTTGCTGGTCGTA
GTAGCGTGGTGACACCACCGACTGTACGGACTCGACAAGAGGTTCAGAGG
CTCCATCCTCCGTAGGTGTTTCCTCTAAAACTCCCGTTTATTTGTTGTAA
CGCCGAAATGAACGAGACGAAACCTCCCGTCAACAGGACGAAAACCGCAC
ATTTTCGCCCCGCCACGTCCGTCGGTTGACCTTGACATATCAAAACAGCT
TGACATTTTCAGGAAAACGAAGCCGCCGCACAAGTGATCAGCGTGCTGTA
CCGTCGCAGAAGAAATGACTAGTGTGTGGCTCCTAGGCATTCACACGTCA
AAGACGACAGGTCCGACGATGGGCAAAAGTATGGCAGGGCCCCGCTCCCC
GCTCGCACTCCAGAAATACCCCACGTAGGTCGGCATGTATTGGCCAAATT
TGCATCGGTCATTCCAATACACACAGATTCATCTCTATGGGGTGGAAGAA
CGAGACAAGAATTATACCTACGCAACAATTCCATCTTACGACAAAGCCAC
AACGTCTGTCCCCGCACCTCTACTGCTGTGCTAAGAAATACCAACGCTAG
GTTCTTGTTATCTATTATCACCCCCGCCGTGCGCAGACCAGACGCGTAAC
AGGCCACGTGAAAAATGTTGAAGGAAAAACAGAGAGTGAAACACAAGATA
TAAAATACCGACGAAATACGTCACATACATCAGACGAGAGCGTGGAAACT
ATGCGATGGCATGCCCGCTACCTCCACCATGTTTCGTCTGGCACCAATCC
CACTTACGGTCTGCTATCTCCCCCCTTACTCTCCTGTGTTGCATGCATAC
TTAGTTTGGACCTTTCCGCGTCGATCTTGGGACCTCGCATATCCGGTTGA
GAAATTTAACCCACCCCGCCACACTTGCCGTGCTTTCTTGCAACTGCCGG
GACAGAGAGAAAGGACACTCGTTGCTTCCTCACCTCCAGAGCAATGGCGG
ACGTCGCGATGATCGTTCTTGGTGTAATGGCCCAGATCCGTGATTTAGCA
AAAGACATCAAAGAGAATGACCGGCAAGCTTGCCGACTTCTTGATAGGGT
GAAAGCGATCGAGCCTGCCGTGCTAGCCGTCAAACAGGGCACCACAACGT
CGTCTTCCGAGTCGCTGCGCCAACTCTTAGAGACCGTGGACACGATCCGA
AACTTCTTGGAAGGCTACGCACGGATGTCGAACTTCAACCGCGCCCTCAA
GCGTAAATCAAACGCCAGTGAATTCACACAGTTAAGCGTTCACATCACCG
AGGGCATGCAAGCGCTTCAGCTGGACGTCGCCGTGGACACGTGGGCCAAA
GAAGATGCGGAAGACCGCCTGGGTGATCTCGAGAACATGGTGGACATCTT
GGAAAGGATGGAGCGCAACCGCACGGAAAACCACGCACAGATTCTCCGTG
TTTTGAAG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12293:56..3963-

>mRNA_E-fasciculatus_F_contig12293.1768.1 ID=mRNA_E-fasciculatus_F_contig12293.1768.1|Name=mRNA_E-fasciculatus_F_contig12293.1768.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=930bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12293:56..3963- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCGGACGTCGCGATGATCGTTCTTGGTGTAATGGCCCAGATCCGTGA
TTTAGCAAAAGACATCAAAGAGAATGACCGGCAAGCTTGCCGACTTCTTG
ATAGGGTGAAAGCGATCGAGCCTGCCGTGCTAGCCGTCAAACAGGGCACC
ACAACGTCGTCTTCCGAGTCGCTGCGCCAACTCTTAGAGACCGTGGACAC
GATCCGAAACTTCTTGGAAGGCTACGCACGGATGTCGAACTTCAACCGCG
CCCTCAAGCGTAAATCAAACGCCAGTGAATTCACACAGTTAAGCGTTCAC
ATCACCGAGGGCATGCAAGCGCTTCAGCTGGACGTCGCCGTGGACACGTG
GGCCAAAGAAGATGCGGAAGACCGCCTGGGTGATCTCGAGAACATGGTGG
ACATCTTGGAAAGGATGGAGCGCAACCGCACGGAAAACCACGCACAGATT
CTCCGTGTTTTGAAGATGGCGGACGTCGCGATGATCGTTCTTGGTGTAAT
GGCCCAGATCCGTGATTTAGCAAAAGACATCAAAGAGAATGACCGGCAAG
CTTGCCGACTTCTTGATAGGGTGAAAGCGATCGAGCCTGCCGTGCTAGCC
GTCAAACAGGGCACCACAACGTCGTCTTCCGAGTCGCTGCGCCAACTCTT
AGAGACCGTGGACACGATCCGAAACTTCTTGGAAGGCTACGCACGGATGT
CGAACTTCAACCGCGCCCTCAAGCGTAAATCAAACGCCAGTGAATTCACA
CAGTTAAGCGTTCACATCACCGAGGGCATGCAAGCGCTTCAGCTGGACGT
CGCCGTGGACACGTGGGCCAAAGAAGATGCGGAAGACCGCCTGGGTGATC
TCGAGAACATGGTGGACATCTTGGAAAGGATGGAGCGCAACCGCACGGAA
AACCACGCACAGATTCTCCGTGTTTTGAAG
back to top