mRNA_E-fasciculatus_F_contig1229.1765.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1229.1765.1
Unique NamemRNA_E-fasciculatus_F_contig1229.1765.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: A0A6H5K2J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J5_9PHAE)

HSP 1 Score: 406 bits (1044), Expect = 1.970e-137
Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 1
Query:    1 MALRLAAERCCMGKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSVAS 669
            MALRLAAERCC+GKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKV+MVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSVAS
Sbjct:   71 MALRLAAERCCVGKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVEMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSVAS 293          
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: D7FJT6_ECTSI (ATP synthase O subunit, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJT6_ECTSI)

HSP 1 Score: 406 bits (1044), Expect = 3.470e-137
Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 1
Query:    1 MALRLAAERCCMGKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSVAS 669
            MALRLAAERCC+GKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKV+MVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSVAS
Sbjct:   87 MALRLAAERCCVGKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVEMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSVAS 309          
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: A0A836CGT7_9STRA (OSCP/delta subunit of ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGT7_9STRA)

HSP 1 Score: 223 bits (567), Expect = 9.240e-67
Identity = 127/221 (57.47%), Postives = 164/221 (74.21%), Query Frame = 1
Query:    1 MALRLAAERCCMGKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSV 663
            MALR  A R      A R+FA+AA     A+A H PPLKL+GIPARYANATY+AASKAG+L+ V+ DL AF  II  NA F +YL+NPTV+R+ KV +++  FD K  T+ +++NL   MA NARL+DA +VI A+T ++KAK+GE+DAIVTTAEPL+  QEKAL A LK Q+G    I L+T+V+ AL+GGLTVQIGDKFMDLSI++KI S+K  +  +V
Sbjct:    1 MALRQLAARAARPLCA-RTFASAA-----AAADHSPPLKLFGIPARYANATYTAASKAGKLDAVEADLAAFGAIITRNAEFSSYLSNPTVTRADKVALIESVFDGK-HTTDISRNLFTTMAANARLSDARRVIGAFTELMKAKRGEVDAIVTTAEPLSAAQEKALIAALKKQVGDTAKIALETKVDAALIGGLTVQIGDKFMDLSIATKIKSVKNTLAGTV 214          
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: A0A6U5IKY9_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5IKY9_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.740e-46
Identity = 90/198 (45.45%), Postives = 133/198 (67.17%), Query Frame = 1
Query:   46 ATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASM 639
            A R  A  A++  +  A H P + LYGI ARYANA Y AASK+  L++V+ +L + Q    +NA F  YL NPT++R  KV  +      K   S VT NL+  +AGNARLAD  KV+D+Y +++KAK+GE++A + +AEPLT  Q  A+A  +K Q+   + ++L T+V+P+++GGL VQIGD+F+DLS+S KI+++
Sbjct:    8 AVRRLAGPAARRFSVQAEHKPLINLYGINARYANAAYIAASKSKSLDLVETELLSIQKTAHDNAEFGDYLKNPTIARKDKVSAMTSLLSEK--MSPVTVNLMTTLAGNARLADTTKVVDSYIQLMKAKRGEVEATIISAEPLTKAQSDAIATAMKGQVPKGKKVILSTQVDPSILGGLQVQIGDQFLDLSVSGKISTI 203          
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: A0A7S2HDJ6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HDJ6_9STRA)

HSP 1 Score: 169 bits (427), Expect = 3.960e-46
Identity = 91/203 (44.83%), Postives = 137/203 (67.49%), Query Frame = 1
Query:   40 KTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTL 648
            +TA    AT  +    +S +H PP+ LYG+ ARYANA Y AASK+  L+ V+ +L A +    ++  FK +L NP +SR  K   V     AK   S VT NL+  +AGNARLA+  K++D+Y +++KAK+GE++A + +A+PLT  Q +A+AA +K Q+G  +T+VL TEV+P+++GGL VQIGD+F+DLS+ SKI ++  +
Sbjct:    7 RTAATRTATRTTTRALSSDAHKPPIDLYGLHARYANAAYVAASKSSTLDAVESELLAIKASATSSPAFKTFLENPLISRDEKEAQVKDMLAAK--VSPVTLNLMSTLAGNARLAETPKIVDSYVQLMKAKRGEVEATIISADPLTKAQTEAVAAAMKNQVGEGKTVVLSTEVDPSILGGLQVQIGDQFLDLSVGSKIDAVSRM 207          
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: A0A7S4D8J3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8J3_HETAK)

HSP 1 Score: 170 bits (430), Expect = 5.430e-46
Identity = 97/187 (51.87%), Postives = 126/187 (67.38%), Query Frame = 1
Query:   70 ASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKI 630
            A++A A  A+H PP +L+G+ ARYANA Y AASKAG LE V+ ++  FQH++  NA F AYL NPTVSR AKV  VDK F A S  SS+T+NLL AMA NARL +  KV+ AY  +++AK+G                   +   L+AQ+GA ++I+L T V+PA+VGGL VQIGDK MDLS+S+KI
Sbjct:   59 AARAFATEAAHMPPKRLFGLHARYANALYVAASKAGALEQVETEVLGFQHMLAKNAEFAAYLRNPTVSREAKVGAVDKLF-AGSSVSSLTQNLLSAMASNARLGETGKVVSAYAELMRAKRGXXXXXXXXXXXXXXXXXXKVTKALEAQVGAGKSILLTTAVDPAIVGGLVVQIGDKVMDLSVSTKI 244          
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: A0A7S4MZM0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MZM0_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.260e-45
Identity = 88/190 (46.32%), Postives = 131/190 (68.95%), Query Frame = 1
Query:   70 ASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASM 639
            AS+  A +A H PP+ L+GI ARYANATY AASK+G L+ V+ +L A +    ++  F ++L NP +SR  K   V        K + VT NL+  +AGNARLAD  K++D Y +++KAK+GE++A++ +A+ LT  Q  A+AA +K Q GA + +VL T+V+P ++GGL +QIGD+F+DLS+SSKI ++
Sbjct:   21 ASRTLAVAAEHRPPVDLHGIHARYANATYVAASKSGTLDKVETELAAIKATATSSPAFASFLENPLISRDNKEAQVQDMLGG-GKVTPVTLNLMTTLAGNARLADVPKIVDTYVQLMKAKRGEVEAVIISADKLTKAQTDAVAAAMKGQAGAGKKVVLSTKVDPTIIGGLQIQIGDQFLDLSVSSKIDAL 209          
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: A0A7S0AD47_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AD47_9STRA)

HSP 1 Score: 166 bits (419), Expect = 3.000e-45
Identity = 85/181 (46.96%), Postives = 129/181 (71.27%), Query Frame = 1
Query:   88 ASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKI 630
            A+A+H PPL+L+G+ ARYANA Y++ASK+G+L+ V+ +L A       +  F  +L NP +SRS+K   V      K   S VT NL+  +AGNARL++A K++D Y+R++KA +GE+ A + +A+PLT  Q  A+A+ +K Q+GA + +VL TEV+P+++GGL VQIGD+F+DLS+ S+I
Sbjct:    1 AAAAHRPPLQLHGLHARYANAVYTSASKSGQLDKVEGELLAIASTAATSPAFAQFLENPLISRSSKEKTVTDLLSGK--VSPVTLNLMTTLAGNARLSEAPKIVDTYSRLMKAARGEVSATIISADPLTKAQTDAVASAMKGQVGAGKKVVLSTEVDPSILGGLQVQIGDQFLDLSVKSRI 179          
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: K0TAB1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TAB1_THAOC)

HSP 1 Score: 165 bits (417), Expect = 1.050e-44
Identity = 89/199 (44.72%), Postives = 128/199 (64.32%), Query Frame = 1
Query:   34 MGKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKI 630
            +  T  R+  T   +  A  A+H PPL LYG+ ARYANAT+ AASK+  LE V+ +L A ++   N+  F ++L NP +SR  K   V      K  T+ VT NL+  +AGNARL +   + D Y +++KAK+GE++A + +AEPL   QEKA++  +K Q      +VLKTEVNP+++GGL +QIGDKF+DLS+ S+I
Sbjct:    2 LSSTVRRAATTMGRRTMATDAAHRPPLDLYGLNARYANATFVAASKSNNLETVESELLAIKNSAENSKEFASFLENPLISRDDKTKTVTDLLSGK--TTPVTTNLMTTLAGNARLNNIVGITDDYIKLMKAKRGEVEATIISAEPLNKTQEKAVSEAMKTQFPKGAKVVLKTEVNPSILGGLQIQIGDKFLDLSVGSRI 198          
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: A0A7R9WJE6_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WJE6_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.170e-44
Identity = 89/203 (43.84%), Postives = 138/203 (67.98%), Query Frame = 1
Query:   34 MGKTATRSFATA-ASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASM 639
            + + A+RS A A AS+  A +A H PP+ L+G+ ARYANATY AASK+  LE V+ +L A +     +  F ++L NP +SR  K   V      K   + VT NL+  +AGNARL++  K++D Y  ++KAK+GE++A++ +A+ LT  Q +A+A+ +K Q+GA + +VL T+V+P ++GGL +QIGD+F+DLS+SSKI ++
Sbjct:   16 LARAASRSVARAGASRTLAVAAEHRPPVDLHGLQARYANATYVAASKSNSLEKVEGELLAIKATAGTSPAFASFLENPLISRDDKEAQVTDMLSGK--VTPVTLNLMTTLAGNARLSEVPKIVDTYVELMKAKRGEVEAVIISADKLTKAQAEAVASAMKGQVGAGKKVVLSTKVDPTIIGGLQIQIGDQFLDLSVSSKIDAL 216          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2J5_9PHAE1.970e-13799.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJT6_ECTSI3.470e-13799.10ATP synthase O subunit, mitochondrial n=1 Tax=Ecto... [more]
A0A836CGT7_9STRA9.240e-6757.47OSCP/delta subunit of ATPase n=1 Tax=Tribonema min... [more]
A0A6U5IKY9_9STRA2.740e-4645.45Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S2HDJ6_9STRA3.960e-4644.83Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4D8J3_HETAK5.430e-4651.87Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4MZM0_9STRA1.260e-4546.32Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0AD47_9STRA3.000e-4546.96Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
K0TAB1_THAOC1.050e-4444.72Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7R9WJE6_9STRA1.170e-4443.84Hypothetical protein n=2 Tax=Pseudictyota dubia Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1229contigE-fasciculatus_F_contig1229:11132..14737 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score413.3
Seed ortholog evalue7.2e-113
Seed eggNOG ortholog2880.D7FJT6
Preferred nameATP5
KEGG koko:K02113,ko:K02137
KEGG TC3.A.2.1
KEGG Pathwayko00190,ko00195,ko01100,ko04714,ko05010,ko05012,ko05016,map00190,map00195,map01100,map04714,map05010,map05012,map05016
KEGG ModuleM00157,M00158
GOsGO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005753,GO:0005886,GO:0008270,GO:0009507,GO:0009536,GO:0016020,GO:0016469,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045259,GO:0046872,GO:0046914,GO:0050897,GO:0071944,GO:0098796,GO:0098798,GO:0098800
EggNOG free text desc.proton-transporting ATP synthase activity, rotational mechanism
EggNOG OGsCOG0712@1,KOG1662@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionATP synthase O subunit, mitochondrial precursor
Ec32 orthologEc-06_010220.1
Exons6
Model size1456
Cds size672
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1229.1765.1prot_E-fasciculatus_F_contig1229.1765.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1229 11916..14737 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927735.2248843-UTR-E-fasciculatus_F_contig1229:11131..119151622927735.2248843-UTR-E-fasciculatus_F_contig1229:11131..11915Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1229 11132..11915 -
1695995672.0209322-UTR-E-fasciculatus_F_contig1229:11131..119151695995672.0209322-UTR-E-fasciculatus_F_contig1229:11131..11915Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1229 11132..11915 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927735.2356482-CDS-E-fasciculatus_F_contig1229:11915..119451622927735.2356482-CDS-E-fasciculatus_F_contig1229:11915..11945Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1229 11916..11945 -
1695995672.0316377-CDS-E-fasciculatus_F_contig1229:11915..119451695995672.0316377-CDS-E-fasciculatus_F_contig1229:11915..11945Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1229 11916..11945 -
1622927735.2476485-CDS-E-fasciculatus_F_contig1229:12451..125771622927735.2476485-CDS-E-fasciculatus_F_contig1229:12451..12577Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1229 12452..12577 -
1695995672.0413687-CDS-E-fasciculatus_F_contig1229:12451..125771695995672.0413687-CDS-E-fasciculatus_F_contig1229:12451..12577Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1229 12452..12577 -
1622927735.2588348-CDS-E-fasciculatus_F_contig1229:12934..130571622927735.2588348-CDS-E-fasciculatus_F_contig1229:12934..13057Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1229 12935..13057 -
1695995672.0558317-CDS-E-fasciculatus_F_contig1229:12934..130571695995672.0558317-CDS-E-fasciculatus_F_contig1229:12934..13057Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1229 12935..13057 -
1622927735.2693596-CDS-E-fasciculatus_F_contig1229:13646..138201622927735.2693596-CDS-E-fasciculatus_F_contig1229:13646..13820Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1229 13647..13820 -
1695995672.0640357-CDS-E-fasciculatus_F_contig1229:13646..138201695995672.0640357-CDS-E-fasciculatus_F_contig1229:13646..13820Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1229 13647..13820 -
1622927735.2831056-CDS-E-fasciculatus_F_contig1229:13971..140961622927735.2831056-CDS-E-fasciculatus_F_contig1229:13971..14096Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1229 13972..14096 -
1695995672.0738764-CDS-E-fasciculatus_F_contig1229:13971..140961695995672.0738764-CDS-E-fasciculatus_F_contig1229:13971..14096Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1229 13972..14096 -
1622927735.294331-CDS-E-fasciculatus_F_contig1229:14643..147371622927735.294331-CDS-E-fasciculatus_F_contig1229:14643..14737Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1229 14644..14737 -
1695995672.0840232-CDS-E-fasciculatus_F_contig1229:14643..147371695995672.0840232-CDS-E-fasciculatus_F_contig1229:14643..14737Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1229 14644..14737 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1229.1765.1

>prot_E-fasciculatus_F_contig1229.1765.1 ID=prot_E-fasciculatus_F_contig1229.1765.1|Name=mRNA_E-fasciculatus_F_contig1229.1765.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=224bp
MALRLAAERCCMGKTATRSFATAASKATAASASHDPPLKLYGIPARYANA
TYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVD
KAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAI
VTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDK
FMDLSISSKIASMKTLMQDSVAS*
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mRNA from alignment at E-fasciculatus_F_contig1229:11132..14737-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1229.1765.1 ID=mRNA_E-fasciculatus_F_contig1229.1765.1|Name=mRNA_E-fasciculatus_F_contig1229.1765.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3606bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1229:11132..14737- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCTCTTCGGTTGGCCGCGGAGAGATGCTGCATGGGGAAGACCGCCAC CCGGTCCTTTGCTACCGCCGCCTCTAAGGCGACCGCCGCTTCCGGTGAGT TGCGCCGCAAGACCTCCGGCCGTTGTGCCGCAAGATCTCCGTAGACATGC AGAGGCCGTAGTGAAGACGGTTGGGCCCAACAACAGGGCTCGCCTAGTTG GAGACGACTGCTGAGTTGTGCAGCAGGGCAACATTAGCAGGAACACTCGC ATGAAAGAAGTATGTCGGTGGTGTGGTCGCGAGAAGATTGTTGTTGCTGT TTCATCGTTAGCTGTCACTGCTGCTGCTGCTGCTGCTGCTACTGTCATGG TTTTTCGAAGTTTTAGCGTTATACCTGTGGTACGATTTTCCGCCAACGAG CTTAGAATATACCTCGAAATATCCGCGAATTGTTGCTGGGCTAGGAACCC GCTGCCGTGCAGGTGCGCTATTGCCTTTGTTGTCATGCTGGCAGAATACG TGAGCCATCGATTGTCTCCTCTTCGATTTTCCAACGGAACGCTCGAGGTG GGGCTGTCGAAGGGTTGACCGTTGTCTCTTGTCTCTTCATGACTTTCGTT TTTGTTTTCTGCTCTATTCCCTCCCACACCACACACCTCAGCGAGCCACG ACCCGCCGCTGAAGCTTTACGGCATCCCCGCCCGTTACGCGAACGCCACC TACTCGGCGGCGTCCAAGGCCGGGGAGCTGGAGATCGTGCAACGAGACCT CGACGCCTTCCAGCACGTGAGAAAGAAAGAAAGGAGCGAAACCGCCACTG CTTTGAACTGTCTACGCTGTAACGACCATACTGCTATGTTTTTGTTGCAC CTGATGAATAATATTTTGTAAAATCCCCTGATCGTCCCCTTCCCCCCATC CGCGCGCGCTTTTGCAGATCATCCGTAACAACGCCAACTTCAAGGCGTAC CTGACCAACCCCACGGTGTCGCGGAGCGCGAAGGTGGACATGGTTGACAA GGCCTTCGACGCCAAGTCCAAGACCTCTTCCGTGACCAAGAACCTGCTCC TCGCCATGGCAGGGAACGCCAGGCTGGCGGACGCCGAGAAGGTGCCTTGC CTTGTGTCCGTGTCGTGCGGCATTCACAAGCAGAATCGATCGTAGTGGTT GTGATGGATTCATGATCGTTGTAGTTCGCAAGCAGTAACGGTAGTGGTTG TTGTGGTGGAGATGATCAATGTCGTGCAATGGTGGTCGTGGTGGAAGTGT GTACCGCGGAGGTAGCGCTTGTTTGCGCGGAACTCTCGGGCCCGTAGTCA CAGGCAGGTACTGAAGGCCTCCGTTCTCGACACCGCCGCTACAGTACAGC TTTCACGTGGGAGGGTAGGGGTCCCTGTCGTCGATGTGGTACGACCGCTG TGCGGTTGTTCTCAGAATGTACGGCGTAGTGTATAGCGACGTCGTCATCA GACCTACTATTGTTTGGCTGAGACGAGCGCATCAAACCGATACTGTACTG GACAACCAGAAACGGCACTGCTCTAGAAGTAAGTCTGGATGGACCCACCG GCTTGCCCAGGGAGTCCCGCCCCATGAAAAGTAGCACGCAAGTTTTTTTA TCCTAGTATGGCATCGCCGCACAAAGACAAGAAAATATTGCGTTAATTTC TCCGTCCCTCTCCCGCGCGCACTGTACCAGGTGATCGACGCGTACACCCG CATGCTGAAGGCGAAGAAGGGGGAGATCGACGCCATCGTCACCACCGCGG AGCCCCTTACCCCCCAGCAGGAGAAGGCCCTGGCGGCCGGCCTCAAGGCG CAGGTGTGTTGATTTTTTTAGTCTCCCCTGTCTGGAACGGTTTGTGTGTC TGGCTTGAAACCACAGGCTAGGTTTCTGGGATTGAAGGGAGCAAAGGTGG AAGAGGGGGTGTGGTGTTTTTTGGCAAGACGTATCGACACACGTCAGGTT CAACTAGCCTTTACCTGATGCTCGTGTTTCAGAGACGATAGCACGCGTAC GTACAGTTTGTGTAGCCTTCTACAGCGAGTGTCACGTATAGCTTTGTAAC CTAACCACTCTCGGGTTTGTCCCGAGCAATGTACCACATCGTATCACAGC AGTGTCTTGAAATCCGCATGCTTCTTCCGTTCACTCCTGCGTCCGTGTTT ATTCGATCAGATTGGCGCGAACGAGACCATCGTCCTCAAGACGGAGGTCA ACCCGGCGCTGGTGGGAGGCTTGACGGTGCAGATCGGGGACAAGTTCATG GACCTCTCGATTTCGAGCAAGATCGCGTCCATGAAGGTGCGTCGCGCAGG ATTTAGGACAGATGGCCAAGGCAATCAACAGAAACACATCGATATGGAAA AGCACTGACAAAAAACACGGTACATAGAGTTACTATGCGATCGGCATCCG TGTAGTGCGATATAGACACAGGTGGACGAACGCTGCCACTTCACCGATCG TCGAGAAATGACTTGCACAGCCAGTGGGTATGCGTCACAACGCGAATCCT CTCGCTGATCTCACTCTGTTGCTCCATTCAGGCGCCCCTGCTGCACGCGC CCCCTGTGCTTAGCGCGTGGTGTTTCCCGCCAATTCCTAATACGTTTTCA CCGTTCTGGAACACGAACATGCTTGAAACAAGTTTCATCCGCCCGTACCT CTTGCATGCTGCTGTTGAATGACTCCCCCTCACTATGAGATGTATGGAAC GATCCTCCGCTTCCCGGCTCTTTCGGAAGAAAAATACTTACCTCCCTATC GCGGTTTTGTCCTCTGTACCCCTTGCTGCTTTGTTTCTGCAGACGCTCAT GCAAGACTCGGTGGCGAGCTAAAAAAGGGATAGGATAGAGGGAGGCATCG GAAAGGCCCTATTTTTTGGAAATTGGGAATGCTGTGAATCGTCTTCTGGG AATCAACGGGGGGGGGGGCGGATAATACCGGCGCCTCTTGGCATGCTGAA CTTTGTACGGTACCTTACGCGGATGACACCGGTTCCCGTCTACCCAAGAC TGATGTAGCTATGTTCTCGCCCGGATGCACCGTTGGGGGGCACTGGTAGG ATCGGCCCTACCGGTAGACGCCTTGATGGTGGGAGAAGGGTAAGAGCTGC GGAGGAAGAGGCCTTGTACTAGATTAATGTTCGCCAAGCCGTGTTCCCGA TTCGGGTTGGCCCAATGAGGCTGGCGGGCGAATACGGCAAGAGTTTTGAT TTTTTTCGTTGTCGAAAATGAACAGAGAGGACATGTTCTTGAAAACAGTA CTGTTGATCAGCATCTGTTGTTGAAGCTACTTGGACCGCGACGTGGGCGT GTGTACTGCTGCGGCGCTGTCAGGGTGCTTCGAACGCACCGGTTCGTGTT TGCGGACGTGATGCTCGACGCGCCATCGAGACGAAACGACTCTGCGACCC TGCTCGATTCCACGTCACCCAGGCGTTCACCACATTGTTGAGATGTGCGG AACTACCCCGGCTAAACAATGTACGTAAGAGGACTGAAAACGTTCGGCAT CGAAATTAATTGGATGTTCTCGTCGTTGCGTGGATGCCATTGACAGCGGA AAATGCACCTTCGAGTGTTTGCGGCACCTACCTTTCGACTCAACACTTGC GCGGGC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1229:11132..14737-

>mRNA_E-fasciculatus_F_contig1229.1765.1 ID=mRNA_E-fasciculatus_F_contig1229.1765.1|Name=mRNA_E-fasciculatus_F_contig1229.1765.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1344bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1229:11132..14737- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCTCTTCGGTTGGCCGCGGAGAGATGCTGCATGGGGAAGACCGCCAC
CCGGTCCTTTGCTACCGCCGCCTCTAAGGCGACCGCCGCTTCCGATGGCT
CTTCGGTTGGCCGCGGAGAGATGCTGCATGGGGAAGACCGCCACCCGGTC
CTTTGCTACCGCCGCCTCTAAGGCGACCGCCGCTTCCGCGAGCCACGACC
CGCCGCTGAAGCTTTACGGCATCCCCGCCCGTTACGCGAACGCCACCTAC
TCGGCGGCGTCCAAGGCCGGGGAGCTGGAGATCGTGCAACGAGACCTCGA
CGCCTTCCAGCACCGAGCCACGACCCGCCGCTGAAGCTTTACGGCATCCC
CGCCCGTTACGCGAACGCCACCTACTCGGCGGCGTCCAAGGCCGGGGAGC
TGGAGATCGTGCAACGAGACCTCGACGCCTTCCAGCACATCATCCGTAAC
AACGCCAACTTCAAGGCGTACCTGACCAACCCCACGGTGTCGCGGAGCGC
GAAGGTGGACATGGTTGACAAGGCCTTCGACGCCAAGTCCAAGACCTCTT
CCGTGACCAAGAACCTGCTCCTCGCCATGGCAGGGAACGCCAGGCTGGCG
GACGCCGAGAAGATCATCCGTAACAACGCCAACTTCAAGGCGTACCTGAC
CAACCCCACGGTGTCGCGGAGCGCGAAGGTGGACATGGTTGACAAGGCCT
TCGACGCCAAGTCCAAGACCTCTTCCGTGACCAAGAACCTGCTCCTCGCC
ATGGCAGGGAACGCCAGGCTGGCGGACGCCGAGAAGGTGATCGACGCGTA
CACCCGCATGCTGAAGGCGAAGAAGGGGGAGATCGACGCCATCGTCACCA
CCGCGGAGCCCCTTACCCCCCAGCAGGAGAAGGCCCTGGCGGCCGGCCTC
AAGGCGCAGGTGATCGACGCGTACACCCGCATGCTGAAGGCGAAGAAGGG
GGAGATCGACGCCATCGTCACCACCGCGGAGCCCCTTACCCCCCAGCAGG
AGAAGGCCCTGGCGGCCGGCCTCAAGGCGCAGATTGGCGCGAACGAGACC
ATCGTCCTCAAGACGGAGGTCAACCCGGCGCTGGTGGGAGGCTTGACGGT
GCAGATCGGGGACAAGTTCATGGACCTCTCGATTTCGAGCAAGATCGCGT
CCATGAAGATTGGCGCGAACGAGACCATCGTCCTCAAGACGGAGGTCAAC
CCGGCGCTGGTGGGAGGCTTGACGGTGCAGATCGGGGACAAGTTCATGGA
CCTCTCGATTTCGAGCAAGATCGCGTCCATGAAGACGCTCATGCAAGACT
CGGTGGCGAGCTAAACGCTCATGCAAGACTCGGTGGCGAGCTAA
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