mRNA_E-fasciculatus_F_contig1229.1765.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: A0A6H5K2J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J5_9PHAE) HSP 1 Score: 406 bits (1044), Expect = 1.970e-137 Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 1
Query: 1 MALRLAAERCCMGKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSVAS 669
MALRLAAERCC+GKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKV+MVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSVAS
Sbjct: 71 MALRLAAERCCVGKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVEMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSVAS 293
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: D7FJT6_ECTSI (ATP synthase O subunit, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJT6_ECTSI) HSP 1 Score: 406 bits (1044), Expect = 3.470e-137 Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 1
Query: 1 MALRLAAERCCMGKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSVAS 669
MALRLAAERCC+GKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKV+MVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSVAS
Sbjct: 87 MALRLAAERCCVGKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVEMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSVAS 309
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: A0A836CGT7_9STRA (OSCP/delta subunit of ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGT7_9STRA) HSP 1 Score: 223 bits (567), Expect = 9.240e-67 Identity = 127/221 (57.47%), Postives = 164/221 (74.21%), Query Frame = 1
Query: 1 MALRLAAERCCMGKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTLMQDSV 663
MALR A R A R+FA+AA A+A H PPLKL+GIPARYANATY+AASKAG+L+ V+ DL AF II NA F +YL+NPTV+R+ KV +++ FD K T+ +++NL MA NARL+DA +VI A+T ++KAK+GE+DAIVTTAEPL+ QEKAL A LK Q+G I L+T+V+ AL+GGLTVQIGDKFMDLSI++KI S+K + +V
Sbjct: 1 MALRQLAARAARPLCA-RTFASAA-----AAADHSPPLKLFGIPARYANATYTAASKAGKLDAVEADLAAFGAIITRNAEFSSYLSNPTVTRADKVALIESVFDGK-HTTDISRNLFTTMAANARLSDARRVIGAFTELMKAKRGEVDAIVTTAEPLSAAQEKALIAALKKQVGDTAKIALETKVDAALIGGLTVQIGDKFMDLSIATKIKSVKNTLAGTV 214
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: A0A6U5IKY9_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5IKY9_9STRA) HSP 1 Score: 169 bits (428), Expect = 2.740e-46 Identity = 90/198 (45.45%), Postives = 133/198 (67.17%), Query Frame = 1
Query: 46 ATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASM 639
A R A A++ + A H P + LYGI ARYANA Y AASK+ L++V+ +L + Q +NA F YL NPT++R KV + K S VT NL+ +AGNARLAD KV+D+Y +++KAK+GE++A + +AEPLT Q A+A +K Q+ + ++L T+V+P+++GGL VQIGD+F+DLS+S KI+++
Sbjct: 8 AVRRLAGPAARRFSVQAEHKPLINLYGINARYANAAYIAASKSKSLDLVETELLSIQKTAHDNAEFGDYLKNPTIARKDKVSAMTSLLSEK--MSPVTVNLMTTLAGNARLADTTKVVDSYIQLMKAKRGEVEATIISAEPLTKAQSDAIATAMKGQVPKGKKVILSTQVDPSILGGLQVQIGDQFLDLSVSGKISTI 203
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: A0A7S2HDJ6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HDJ6_9STRA) HSP 1 Score: 169 bits (427), Expect = 3.960e-46 Identity = 91/203 (44.83%), Postives = 137/203 (67.49%), Query Frame = 1
Query: 40 KTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASMKTL 648
+TA AT + +S +H PP+ LYG+ ARYANA Y AASK+ L+ V+ +L A + ++ FK +L NP +SR K V AK S VT NL+ +AGNARLA+ K++D+Y +++KAK+GE++A + +A+PLT Q +A+AA +K Q+G +T+VL TEV+P+++GGL VQIGD+F+DLS+ SKI ++ +
Sbjct: 7 RTAATRTATRTTTRALSSDAHKPPIDLYGLHARYANAAYVAASKSSTLDAVESELLAIKASATSSPAFKTFLENPLISRDEKEAQVKDMLAAK--VSPVTLNLMSTLAGNARLAETPKIVDSYVQLMKAKRGEVEATIISADPLTKAQTEAVAAAMKNQVGEGKTVVLSTEVDPSILGGLQVQIGDQFLDLSVGSKIDAVSRM 207
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: A0A7S4D8J3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8J3_HETAK) HSP 1 Score: 170 bits (430), Expect = 5.430e-46 Identity = 97/187 (51.87%), Postives = 126/187 (67.38%), Query Frame = 1
Query: 70 ASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKI 630
A++A A A+H PP +L+G+ ARYANA Y AASKAG LE V+ ++ FQH++ NA F AYL NPTVSR AKV VDK F A S SS+T+NLL AMA NARL + KV+ AY +++AK+G + L+AQ+GA ++I+L T V+PA+VGGL VQIGDK MDLS+S+KI
Sbjct: 59 AARAFATEAAHMPPKRLFGLHARYANALYVAASKAGALEQVETEVLGFQHMLAKNAEFAAYLRNPTVSREAKVGAVDKLF-AGSSVSSLTQNLLSAMASNARLGETGKVVSAYAELMRAKRGXXXXXXXXXXXXXXXXXXKVTKALEAQVGAGKSILLTTAVDPAIVGGLVVQIGDKVMDLSVSTKI 244
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: A0A7S4MZM0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MZM0_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.260e-45 Identity = 88/190 (46.32%), Postives = 131/190 (68.95%), Query Frame = 1
Query: 70 ASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASM 639
AS+ A +A H PP+ L+GI ARYANATY AASK+G L+ V+ +L A + ++ F ++L NP +SR K V K + VT NL+ +AGNARLAD K++D Y +++KAK+GE++A++ +A+ LT Q A+AA +K Q GA + +VL T+V+P ++GGL +QIGD+F+DLS+SSKI ++
Sbjct: 21 ASRTLAVAAEHRPPVDLHGIHARYANATYVAASKSGTLDKVETELAAIKATATSSPAFASFLENPLISRDNKEAQVQDMLGG-GKVTPVTLNLMTTLAGNARLADVPKIVDTYVQLMKAKRGEVEAVIISADKLTKAQTDAVAAAMKGQAGAGKKVVLSTKVDPTIIGGLQIQIGDQFLDLSVSSKIDAL 209
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: A0A7S0AD47_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AD47_9STRA) HSP 1 Score: 166 bits (419), Expect = 3.000e-45 Identity = 85/181 (46.96%), Postives = 129/181 (71.27%), Query Frame = 1
Query: 88 ASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKI 630
A+A+H PPL+L+G+ ARYANA Y++ASK+G+L+ V+ +L A + F +L NP +SRS+K V K S VT NL+ +AGNARL++A K++D Y+R++KA +GE+ A + +A+PLT Q A+A+ +K Q+GA + +VL TEV+P+++GGL VQIGD+F+DLS+ S+I
Sbjct: 1 AAAAHRPPLQLHGLHARYANAVYTSASKSGQLDKVEGELLAIASTAATSPAFAQFLENPLISRSSKEKTVTDLLSGK--VSPVTLNLMTTLAGNARLSEAPKIVDTYSRLMKAARGEVSATIISADPLTKAQTDAVASAMKGQVGAGKKVVLSTEVDPSILGGLQVQIGDQFLDLSVKSRI 179
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: K0TAB1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TAB1_THAOC) HSP 1 Score: 165 bits (417), Expect = 1.050e-44 Identity = 89/199 (44.72%), Postives = 128/199 (64.32%), Query Frame = 1
Query: 34 MGKTATRSFATAASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKI 630
+ T R+ T + A A+H PPL LYG+ ARYANAT+ AASK+ LE V+ +L A ++ N+ F ++L NP +SR K V K T+ VT NL+ +AGNARL + + D Y +++KAK+GE++A + +AEPL QEKA++ +K Q +VLKTEVNP+++GGL +QIGDKF+DLS+ S+I
Sbjct: 2 LSSTVRRAATTMGRRTMATDAAHRPPLDLYGLNARYANATFVAASKSNNLETVESELLAIKNSAENSKEFASFLENPLISRDDKTKTVTDLLSGK--TTPVTTNLMTTLAGNARLNNIVGITDDYIKLMKAKRGEVEATIISAEPLNKTQEKAVSEAMKTQFPKGAKVVLKTEVNPSILGGLQIQIGDKFLDLSVGSRI 198
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Match: A0A7R9WJE6_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WJE6_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.170e-44 Identity = 89/203 (43.84%), Postives = 138/203 (67.98%), Query Frame = 1
Query: 34 MGKTATRSFATA-ASKATAASASHDPPLKLYGIPARYANATYSAASKAGELEIVQRDLDAFQHIIRNNANFKAYLTNPTVSRSAKVDMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKVIDAYTRMLKAKKGEIDAIVTTAEPLTPQQEKALAAGLKAQIGANETIVLKTEVNPALVGGLTVQIGDKFMDLSISSKIASM 639
+ + A+RS A A AS+ A +A H PP+ L+G+ ARYANATY AASK+ LE V+ +L A + + F ++L NP +SR K V K + VT NL+ +AGNARL++ K++D Y ++KAK+GE++A++ +A+ LT Q +A+A+ +K Q+GA + +VL T+V+P ++GGL +QIGD+F+DLS+SSKI ++
Sbjct: 16 LARAASRSVARAGASRTLAVAAEHRPPVDLHGLQARYANATYVAASKSNSLEKVEGELLAIKATAGTSPAFASFLENPLISRDDKEAQVTDMLSGK--VTPVTLNLMTTLAGNARLSEVPKIVDTYVELMKAKRGEVEAVIISADKLTKAQAEAVASAMKGQVGAGKKVVLSTKVDPTIIGGLQIQIGDQFLDLSVSSKIDAL 216 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1229.1765.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1229.1765.1 >prot_E-fasciculatus_F_contig1229.1765.1 ID=prot_E-fasciculatus_F_contig1229.1765.1|Name=mRNA_E-fasciculatus_F_contig1229.1765.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=224bp MALRLAAERCCMGKTATRSFATAASKATAASASHDPPLKLYGIPARYANAback to top mRNA from alignment at E-fasciculatus_F_contig1229:11132..14737- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1229.1765.1 ID=mRNA_E-fasciculatus_F_contig1229.1765.1|Name=mRNA_E-fasciculatus_F_contig1229.1765.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3606bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1229:11132..14737- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1229:11132..14737- >mRNA_E-fasciculatus_F_contig1229.1765.1 ID=mRNA_E-fasciculatus_F_contig1229.1765.1|Name=mRNA_E-fasciculatus_F_contig1229.1765.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1344bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1229:11132..14737- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |