prot_E-fasciculatus_F_contig12271.1754.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12271.1754.1
Unique Nameprot_E-fasciculatus_F_contig12271.1754.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length76
Homology
BLAST of mRNA_E-fasciculatus_F_contig12271.1754.1 vs. uniprot
Match: A0A6H5KZD5_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZD5_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 3.180e-41
Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0
Query:    2 VGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGACILLNQQELMAELAAKQRQGQEGGVASR 75
            VGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGACILL+QQELMAELAAKQRQGQEGGVASR
Sbjct:  375 VGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGACILLDQQELMAELAAKQRQGQEGGVASR 448          
BLAST of mRNA_E-fasciculatus_F_contig12271.1754.1 vs. uniprot
Match: A0A836CKN4_9STRA (Peptide chain release factor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN4_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 4.190e-23
Identity = 47/66 (71.21%), Postives = 58/66 (87.88%), Query Frame = 0
Query:    2 VGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGACILLNQQELMAELAAKQRQG 67
            VGSG+RSEKIRTYNWKDSRCSDHRI +N+PL+ FLSG+ +DDMI ACI+++QQE + E+A KQ QG
Sbjct:  303 VGSGARSEKIRTYNWKDSRCSDHRINRNWPLDTFLSGT-IDDMIAACIVMDQQEQLQEMARKQAQG 367          
BLAST of mRNA_E-fasciculatus_F_contig12271.1754.1 vs. uniprot
Match: A0A6U2GK04_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2GK04_HEMAN)

HSP 1 Score: 90.9 bits (224), Expect = 8.870e-20
Identity = 42/59 (71.19%), Postives = 51/59 (86.44%), Query Frame = 0
Query:    2 VGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGACILLNQQELMAEL 60
            VG+GSRSEKIRTYNWKD RCSDHR+GKNFPLN+F++GS +D MI  CI  +QQE +A+L
Sbjct:  366 VGTGSRSEKIRTYNWKDGRCSDHRLGKNFPLNDFMAGS-IDGMISECIFKDQQEKLAQL 423          
BLAST of mRNA_E-fasciculatus_F_contig12271.1754.1 vs. uniprot
Match: A0A7S0E3D2_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E3D2_9CRYP)

HSP 1 Score: 83.2 bits (204), Expect = 1.120e-18
Identity = 39/60 (65.00%), Postives = 48/60 (80.00%), Query Frame = 0
Query:    2 VGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGACILLNQQELMAELA 61
            VG+GSRSEKIRTYNWKD RCSDHR+ KNFPL  FLSG  L+ +I  CI  +QQ+ +A++A
Sbjct:   78 VGTGSRSEKIRTYNWKDGRCSDHRLNKNFPLQQFLSGE-LESIIQECIFKDQQQKLADMA 136          
BLAST of mRNA_E-fasciculatus_F_contig12271.1754.1 vs. uniprot
Match: A0A7S3JVW2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVW2_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.100e-17
Identity = 40/62 (64.52%), Postives = 50/62 (80.65%), Query Frame = 0
Query:    2 VGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGACILLNQQELMAELAAK 63
            VG+G RSEKIRTYNWKDSRC+DHR+ +NFPL+  L+G  LD +I ACI L Q E+++ELA K
Sbjct:  304 VGTGGRSEKIRTYNWKDSRCTDHRLNQNFPLDKVLNGD-LDPIISACIALAQSEMLSELAEK 364          
BLAST of mRNA_E-fasciculatus_F_contig12271.1754.1 vs. uniprot
Match: A0A6S9M8F3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M8F3_HETAK)

HSP 1 Score: 84.7 bits (208), Expect = 1.450e-17
Identity = 41/63 (65.08%), Postives = 52/63 (82.54%), Query Frame = 0
Query:    2 VGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGACILLNQQELMAELAAKQ 64
            VG+G+RSEKIRTYNWKDSRCSDHRIG+NFPL  FL G  +DD+I A I+ +QQ+ + E+A +Q
Sbjct:  351 VGTGARSEKIRTYNWKDSRCSDHRIGQNFPLQMFLDGK-VDDIIQALIVSDQQDQLKEMAEEQ 412          
BLAST of mRNA_E-fasciculatus_F_contig12271.1754.1 vs. uniprot
Match: A0A140ECJ7_9STRA (Plastid peptide chain release factor 1 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A140ECJ7_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.510e-17
Identity = 38/65 (58.46%), Postives = 52/65 (80.00%), Query Frame = 0
Query:    2 VGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGACILLNQQELMAELAAKQRQ 66
            +GSG RSEKIRTYNWKDSRC+DHR+G+NF L+ FLSG  +D+MI  C+L+ Q E + +++ +Q Q
Sbjct:  362 IGSGGRSEKIRTYNWKDSRCTDHRLGQNFNLDKFLSGE-IDEMINQCLLMEQNEKLEQMSKEQLQ 425          
BLAST of mRNA_E-fasciculatus_F_contig12271.1754.1 vs. uniprot
Match: A0A1Z5KKR0_FISSO (Peptide chain release factor 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKR0_FISSO)

HSP 1 Score: 84.3 bits (207), Expect = 1.840e-17
Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 0
Query:    2 VGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGACILLNQQELMAEL 60
            VG+GSRSEKIRTYNWKDSRCSDHR+G+NFPL  FLSG  +D MI A I  +Q+E + EL
Sbjct:  335 VGTGSRSEKIRTYNWKDSRCSDHRLGQNFPLQQFLSGD-IDGMISAMIAKDQEEKLREL 392          
BLAST of mRNA_E-fasciculatus_F_contig12271.1754.1 vs. uniprot
Match: A0A448Z911_9STRA (RF_PROK_I domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z911_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 3.630e-17
Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 0
Query:    2 VGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGACILLNQQELMAELA 61
            VG+G RSEKIRTYNWKDSRCSDHRI +N+PLN FL G  +D +IGA I+ +Q+E + ELA
Sbjct:  344 VGTGGRSEKIRTYNWKDSRCSDHRIQQNYPLNQFLGGD-IDPIIGAMIMKDQEEKLKELA 402          
BLAST of mRNA_E-fasciculatus_F_contig12271.1754.1 vs. uniprot
Match: L1JFM6_GUITC (RF_PROK_I domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JFM6_GUITC)

HSP 1 Score: 83.2 bits (204), Expect = 3.800e-17
Identity = 39/60 (65.00%), Postives = 48/60 (80.00%), Query Frame = 0
Query:    2 VGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGACILLNQQELMAELA 61
            VG+GSRSEKIRTYNWKD RCSDHR+ KNFPL  FLSG  L+ +I  CI  +QQ+ +A++A
Sbjct:  296 VGTGSRSEKIRTYNWKDGRCSDHRLNKNFPLQQFLSGD-LESIIQECIFKDQQQKLADMA 354          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12271.1754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZD5_9PHAE3.180e-4198.65RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CKN4_9STRA4.190e-2371.21Peptide chain release factor 1 n=1 Tax=Tribonema m... [more]
A0A6U2GK04_HEMAN8.870e-2071.19Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0E3D2_9CRYP1.120e-1865.00Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S3JVW2_9STRA1.100e-1764.52Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6S9M8F3_HETAK1.450e-1765.08Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A140ECJ7_9STRA1.510e-1758.46Plastid peptide chain release factor 1 n=1 Tax=Tra... [more]
A0A1Z5KKR0_FISSO1.840e-1769.49Peptide chain release factor 1 n=2 Tax=Fistulifera... [more]
A0A448Z911_9STRA3.630e-1766.67RF_PROK_I domain-containing protein n=1 Tax=Pseudo... [more]
L1JFM6_GUITC3.800e-1765.00RF_PROK_I domain-containing protein n=1 Tax=Guilla... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.1660coord: 1..62
e-value: 1.0E-12
score: 50.0
NoneNo IPR availablePANTHERPTHR43804FAMILY NOT NAMEDcoord: 1..63
NoneNo IPR availablePANTHERPTHR43804:SF4PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTICcoord: 1..63
NoneNo IPR availableSUPERFAMILY75620Release factorcoord: 2..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12271contigE-fasciculatus_F_contig12271:18..245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12271.1754.1mRNA_E-fasciculatus_F_contig12271.1754.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12271 18..245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12271.1754.1 ID=prot_E-fasciculatus_F_contig12271.1754.1|Name=mRNA_E-fasciculatus_F_contig12271.1754.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=76bp
KVGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGACIL
LNQQELMAELAAKQRQGQEGGVASR*
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