mRNA_E-fasciculatus_F_contig12258.1747.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12258.1747.1 vs. uniprot
Match: D7FIS1_ECTSI (Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS1_ECTSI) HSP 1 Score: 253 bits (645), Expect = 1.890e-81 Identity = 126/131 (96.18%), Postives = 127/131 (96.95%), Query Frame = 1
Query: 1 NKRWIDEAFGGAPSVEEIVLRLRGMVAEASGGREWAQGALESLGKASPTALKVTHRHISWAVTTTLKDCLEQDFRVMQHIMATNGDFDEGVRALLIDKDNQPAWSPPTLEGVADARVQELFSEIEAGETVF 393
NKRWIDEAFGGAPSVEEIVLRLRGMVAEASGGREWAQGALESL KASPTALKVTHRHISWA TTTLKDCLEQDFRVMQH MA NGDFDEGVRALLIDKDNQPAWSPPTLEGVAD+RVQELFSEIEAGETVF
Sbjct: 251 NKRWIDEAFGGAPSVEEIVLRLRGMVAEASGGREWAQGALESLAKASPTALKVTHRHISWAATTTLKDCLEQDFRVMQH-MAMNGDFDEGVRALLIDKDNQPAWSPPTLEGVADSRVQELFSEIEAGETVF 380
BLAST of mRNA_E-fasciculatus_F_contig12258.1747.1 vs. uniprot
Match: A0A835CSY9_9HYME (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial n=2 Tax=Aphidius gifuensis TaxID=684658 RepID=A0A835CSY9_9HYME) HSP 1 Score: 105 bits (263), Expect = 1.010e-24 Identity = 56/126 (44.44%), Postives = 77/126 (61.11%), Query Frame = 1
Query: 1 NKRWIDEAFGGAPSVEEIVLRLRGMVAEASGGREWAQGALESLGKASPTALKVTHRHISWAVTTTLKDCLEQDFRVMQHIMATNGDFDEGVRALLIDKDNQPAWSPPTLEGVADARVQELFSEIEA 378
N + ID F G SVEEI+ RL+ EWAQG +E+LGK SPT+LKV H+ I+ +L +CL+ ++ + +++ N DF EG+RALLIDKD +P W+P TL V + V FS I A
Sbjct: 221 NLKQIDYCFSG-DSVEEIINRLK------KDNSEWAQGVIETLGKMSPTSLKVAHKSITQGKDQSLANCLKMEYTLDYNMVLKNSDFQEGIRALLIDKDQKPVWNPKTLADVTNEYVNSKFSPIPA 339
BLAST of mRNA_E-fasciculatus_F_contig12258.1747.1 vs. uniprot
Match: V5SDD7_9HYPH (Enoyl-CoA hydratase n=1 Tax=Hyphomicrobium nitrativorans NL23 TaxID=1029756 RepID=V5SDD7_9HYPH) HSP 1 Score: 104 bits (260), Expect = 3.180e-24 Identity = 57/119 (47.90%), Postives = 71/119 (59.66%), Query Frame = 1
Query: 34 APSVEEIVLRLRGMVAEASGGREWAQGALESLGKASPTALKVTHRHISWAVTTTLKDCLEQDFRVMQHIMATNGDFDEGVRALLIDKDNQPAWSPPTLEGVADARVQELFSEIEAGETV 390
AP+VE IV RL + E REWAQ A L + SP +LK+THRHI A L+ L+ D+R+ ++ GDF EGVRA LIDKD PAWSP LE V +A V F+ + GE V
Sbjct: 235 APTVEGIVARLAAVEGEP---REWAQAAAADLARRSPLSLKITHRHIREAQARDLRQTLQVDYRLAVRMLEAGGDFFEGVRAALIDKDGAPAWSPARLEDVTEAIVSSYFAPLGDGEFV 350
BLAST of mRNA_E-fasciculatus_F_contig12258.1747.1 vs. uniprot
Match: A0A7G3AFK5_LUTLO (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial n=1 Tax=Lutzomyia longipalpis TaxID=7200 RepID=A0A7G3AFK5_LUTLO) HSP 1 Score: 103 bits (257), Expect = 6.110e-24 Identity = 57/121 (47.11%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 13 IDEAFGGAPSVEEIVLRLRGMVAEASGGREWAQGALESLGKASPTALKVTHRHISWAVTTTLKDCLEQDFRV-MQHIMATNGDFDEGVRALLIDKDNQPAWSPPTLEGVADARVQELFSEI 372
IDE F GA +VEEI+ RLR EWAQ L+ L K SPT++KV+ + I TL +CL ++R+ ++H A + D EGVRALL+D+DNQP W+PPTLE V D RV F +
Sbjct: 220 IDECFSGA-TVEEILERLR------KDNSEWAQKTLQGLAKMSPTSMKVSKKQIDLGANMTLPECLVMEYRLAVRH--AQDSDLKEGVRALLVDRDNQPKWNPPTLEEVTDERVDSFFKPL 331
BLAST of mRNA_E-fasciculatus_F_contig12258.1747.1 vs. uniprot
Match: A0A6B2EC45_9DIPT (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial (Fragment) n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2EC45_9DIPT) HSP 1 Score: 103 bits (257), Expect = 7.250e-24 Identity = 56/122 (45.90%), Postives = 79/122 (64.75%), Query Frame = 1
Query: 13 IDEAFGGAPSVEEIVLRLRGMVAEASGGREWAQGALESLGKASPTALKVTHRHISWAVTTTLKDCLEQDFRV-MQHIMATNGDFDEGVRALLIDKDNQPAWSPPTLEGVADARVQELFSEIE 375
I+E F GA +VEEI+ RL+ EWA+G L++L K SPT++KV+ + I TL +CL ++R+ ++H A + D EGVRALL+D+DNQP W+PPTLE V D RV F+ +E
Sbjct: 223 INECFSGA-TVEEILERLK------RDNSEWAKGILKTLAKMSPTSMKVSKKQIDLGANLTLPECLVMEYRLAVRH--AKDSDLKEGVRALLVDRDNQPKWNPPTLEEVTDQRVDSFFAPLE 335
BLAST of mRNA_E-fasciculatus_F_contig12258.1747.1 vs. uniprot
Match: UPI000930885D (enoyl-CoA hydratase/isomerase family protein n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI000930885D) HSP 1 Score: 102 bits (255), Expect = 1.670e-23 Identity = 52/116 (44.83%), Postives = 72/116 (62.07%), Query Frame = 1
Query: 37 PSVEEIVLRLRGMVAEASGGREWAQGALESLGKASPTALKVTHRHISWAVTTTLKDCLEQDFRVMQHIMATNGDFDEGVRALLIDKDNQPAWSPPTLEGVADARVQELFSEIEAGE 384
PSVE I+ RL A + R+WAQ + L + SP +LK+THRHI + L+ L D+R+ HI+A +GDF EGVRA+LIDKD P WSP +E V+D + F+ ++A E
Sbjct: 236 PSVEAILARLE---AVSGAHRDWAQEVVADLRRRSPVSLKITHRHIRESRGRDLRQTLIADYRIAAHILAADGDFYEGVRAMLIDKDGPPRWSPQRIEDVSDEMLDRYFASLDADE 348
BLAST of mRNA_E-fasciculatus_F_contig12258.1747.1 vs. uniprot
Match: UPI0003693580 (enoyl-CoA hydratase/isomerase family protein n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI0003693580) HSP 1 Score: 99.8 bits (247), Expect = 2.370e-22 Identity = 59/124 (47.58%), Postives = 72/124 (58.06%), Query Frame = 1
Query: 13 IDEAFGGAPSVEEIVLRLRGMVAEASGG--REWAQGALESLGKASPTALKVTHRHISWAVTTTLKDCLEQDFRVMQHIMATNGDFDEGVRALLIDKDNQPAWSPPTLEGVADARVQELFSEIEA 378
ID F APSVEEIV RL EA G R+WA + +L SP ALKVTHRHI + L++ L D+R+ + NGDF EGVRA LIDKD P W+P +E V DA V F+ + A
Sbjct: 229 IDRCFS-APSVEEIVARL-----EAVQGVHRDWAGELVANLRHRSPLALKVTHRHIRDSKARDLRETLRADYRIATRFLEANGDFYEGVRAALIDKDGAPRWTPARIEDVTDAMVAAYFAPLGA 346
BLAST of mRNA_E-fasciculatus_F_contig12258.1747.1 vs. uniprot
Match: W5JCR8_ANODA (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial n=7 Tax=Nyssorhynchus TaxID=44543 RepID=W5JCR8_ANODA) HSP 1 Score: 99.8 bits (247), Expect = 2.430e-22 Identity = 56/126 (44.44%), Postives = 74/126 (58.73%), Query Frame = 1
Query: 4 KRWIDEAFGGAPSVEEIVLRLRGMVAEASGGREWAQGALESLGKASPTALKVTHRHISWAVTTTLKDCLEQDFRVMQHIMATNGDFDEGVRALLIDKDNQPAWSPPTLEGVADARVQELFSEIEAG 381
++ ID+ FG AP+VEEI+ RL G EWAQ L+ L K SPT+L VT + + LK CL ++R+ H A + DF EGVRALLID+D +P W P TL V ARV++ F + G
Sbjct: 230 RKQIDQCFG-APTVEEILKRLE------QDGSEWAQSTLKLLHKMSPTSLIVTQKQLELGAKMDLKTCLRMEYRLAVH-HAIDSDFKEGVRALLIDRDQKPRWQPATLAEVDPARVEKFFGPLPDG 347
BLAST of mRNA_E-fasciculatus_F_contig12258.1747.1 vs. uniprot
Match: D3TLD0_GLOMM (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial n=5 Tax=Glossina TaxID=7393 RepID=D3TLD0_GLOMM) HSP 1 Score: 99.8 bits (247), Expect = 2.780e-22 Identity = 52/114 (45.61%), Postives = 71/114 (62.28%), Query Frame = 1
Query: 34 APSVEEIVLRLRGMVAEASGGREWAQGALESLGKASPTALKVTHRHISWAVTTTLKDCLEQDFR-VMQHIMATNGDFDEGVRALLIDKDNQPAWSPPTLEGVADARVQELFSEI 372
A S+EEI+ L+ + G EWA +E+L K SPT+LKVTHR + +L CL ++R V++H+ N DF EGVRA+LIDKD +P W P TLE V + RVQ F+ +
Sbjct: 261 AESIEEIIENLK------TDGSEWALKTVETLSKMSPTSLKVTHRQLELGAKLSLPRCLNMEYRIVLRHLQ--NSDFKEGVRAMLIDKDQKPKWQPNTLEAVTEERVQSFFARL 366
BLAST of mRNA_E-fasciculatus_F_contig12258.1747.1 vs. uniprot
Match: UPI00061501B8 (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial isoform X2 n=2 Tax=Megachile rotundata TaxID=143995 RepID=UPI00061501B8) HSP 1 Score: 99.8 bits (247), Expect = 4.380e-22 Identity = 57/125 (45.60%), Postives = 77/125 (61.60%), Query Frame = 1
Query: 13 IDEAFGGAPSVEEIVLRLRGMVAEASGGREWAQGALESLGKASPTALKVTHRHISWAVTTTLKDCLEQDFRVMQHIMATNGDFDEGVRALLIDKDNQPAWSPPTLEGVADARVQELFSEI-EAGE 384
I++ F APSVEEIV RL+ EWA+ L L KASPT+LK+T I TL DCL+ +FR+ ++ N DF EGVRALLIDKD +P W+P +L+ V D + ++F++ E GE
Sbjct: 305 INKCFS-APSVEEIVKRLK------EDNSEWAEKTLGMLLKASPTSLKMTMCAIQKGAALTLADCLKMEFRLSNAVLHKNSDFYEGVRALLIDKDQKPNWNPKSLDEVTDTYINQIFAKSPEKGE 422 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12258.1747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12258.1747.1 >prot_E-fasciculatus_F_contig12258.1747.1 ID=prot_E-fasciculatus_F_contig12258.1747.1|Name=mRNA_E-fasciculatus_F_contig12258.1747.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=132bp NKRWIDEAFGGAPSVEEIVLRLRGMVAEASGGREWAQGALESLGKASPTAback to top mRNA from alignment at E-fasciculatus_F_contig12258:984..2441+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12258.1747.1 ID=mRNA_E-fasciculatus_F_contig12258.1747.1|Name=mRNA_E-fasciculatus_F_contig12258.1747.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1458bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12258:984..2441+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12258:984..2441+ >mRNA_E-fasciculatus_F_contig12258.1747.1 ID=mRNA_E-fasciculatus_F_contig12258.1747.1|Name=mRNA_E-fasciculatus_F_contig12258.1747.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=792bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12258:984..2441+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |