mRNA_E-fasciculatus_F_contig12254.1745.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12254.1745.1
Unique NamemRNA_E-fasciculatus_F_contig12254.1745.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12254.1745.1 vs. uniprot
Match: D7FUM0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUM0_ECTSI)

HSP 1 Score: 340 bits (873), Expect = 2.000e-107
Identity = 166/177 (93.79%), Postives = 172/177 (97.18%), Query Frame = 1 
Query:    1 WPSFLALSITVSESGQDFQGLVLGKLEVTVESEAGPGETQPRTTNAVLPVTVSVIRTPPRHRRLLWDQFHSVPYPPAYFPRDYLGDDADMLDRLGDHPHTNFRTLFEALLDSGYYVEILGSSWSCFDAESYGALLVVDSEADLGQDEKAKLEMDVKERGLSVVVFADWYSTDVMSQV 531
            W  FLALS+TVSESG+DFQGLVLGKLEVTVESEAGPGETQPRTTNAVLPVTVSVIRTPPRHRRLLWDQFHSVPYPPAYFPRDYLGDDADMLDRLGDHPHTNFRTLFEALLD+GYYVEILGS WSCFDAESYGALLVVD EA+LGQDEKAKLEMDV +RGLSVVVFADWYSTDVMS+V
Sbjct:  774 WSGFLALSLTVSESGRDFQGLVLGKLEVTVESEAGPGETQPRTTNAVLPVTVSVIRTPPRHRRLLWDQFHSVPYPPAYFPRDYLGDDADMLDRLGDHPHTNFRTLFEALLDAGYYVEILGSDWSCFDAESYGALLVVDPEAELGQDEKAKLEMDVNQRGLSVVVFADWYSTDVMSKV 950
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BLAST of mRNA_E-fasciculatus_F_contig12254.1745.1 vs. uniprot
Match: A0A6H5K166_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K166_9PHAE)

HSP 1 Score: 330 bits (845), Expect = 6.550e-102
Identity = 161/177 (90.96%), Postives = 168/177 (94.92%), Query Frame = 1 
Query:    1 WPSFLALSITVSESGQDFQGLVLGKLEVTVESEAGPGETQPRTTNAVLPVTVSVIRTPPRHRRLLWDQFHSVPYPPAYFPRDYLGDDADMLDRLGDHPHTNFRTLFEALLDSGYYVEILGSSWSCFDAESYGALLVVDSEADLGQDEKAKLEMDVKERGLSVVVFADWYSTDVMSQV 531
            W  FLALS+ VSESG++FQGLV GKLEV VES AGPGETQPRTTNAVLPVTVSVIR PPRHRRLLWDQFHSVPYPPAY PRDYLGDDADMLDRLGDHPHTNFRTLFEALLD+GYYVEILGS+WSCFDAESYGALLVVD EA+LGQDEKAKLEMDVKERGLSVVVFADWYSTDVMS+V
Sbjct: 1049 WSGFLALSLAVSESGREFQGLVFGKLEVAVESVAGPGETQPRTTNAVLPVTVSVIRPPPRHRRLLWDQFHSVPYPPAYIPRDYLGDDADMLDRLGDHPHTNFRTLFEALLDAGYYVEILGSNWSCFDAESYGALLVVDPEAELGQDEKAKLEMDVKERGLSVVVFADWYSTDVMSKV 1225
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BLAST of mRNA_E-fasciculatus_F_contig12254.1745.1 vs. uniprot
Match: UPI00158ABAC3 (membrane-bound transcription factor site-1 protease-like isoform X1 n=3 Tax=Chelonus insularis TaxID=460826 RepID=UPI00158ABAC3)

HSP 1 Score: 199 bits (505), Expect = 9.310e-56
Identity = 92/177 (51.98%), Postives = 126/177 (71.19%), Query Frame = 1 
Query:    1 WPSFLALSITVSESGQDFQGLVLGKLEVTVESEAGPGETQPRTTNAVLPVTVSVIRTPPRHRRLLWDQFHSVPYPPAYFPRDYLGDDADMLDRLGDHPHTNFRTLFEALLDSGYYVEILGSSWSCFDAESYGALLVVDSEADLGQDEKAKLEMDVKERGLSVVVFADWYSTDVMSQV 531
            W  ++A+S+TV  S  DFQG+  G + +TV+S  G GE +PR     LP+ + +I TPPRH+RLLWDQFH++ YPP YFPRD L    D LD  GDH HTNF+ +++ L +SGYY+E+LG  ++CFDA+ YG LL+VDSE +   +E  KL+ DV+E GLSV++FADWY+  VM +V
Sbjct:  563 WSGYVAVSLTVPNSAIDFQGIAYGHITLTVQSPPGDGELEPREATVNLPLKIKIIPTPPRHKRLLWDQFHNLRYPPGYFPRDDLRAKNDPLDWNGDHIHTNFKAMYQHLRNSGYYLEVLGLPFTCFDAKLYGTLLIVDSEEEFFPEEIEKLKKDVEEEGLSVIIFADWYNVTVMQKV 739
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BLAST of mRNA_E-fasciculatus_F_contig12254.1745.1 vs. uniprot
Match: A0A6J0B8X2_NEOLC (membrane-bound transcription factor site-1 protease n=13 Tax=Diprioninae TaxID=410274 RepID=A0A6J0B8X2_NEOLC)

HSP 1 Score: 197 bits (502), Expect = 2.340e-55
Identity = 94/177 (53.11%), Postives = 128/177 (72.32%), Query Frame = 1 
Query:    1 WPSFLALSITVSESGQDFQGLVLGKLEVTVESEAGPGETQPRTTNAVLPVTVSVIRTPPRHRRLLWDQFHSVPYPPAYFPRDYLGDDADMLDRLGDHPHTNFRTLFEALLDSGYYVEILGSSWSCFDAESYGALLVVDSEADLGQDEKAKLEMDVKERGLSVVVFADWYSTDVMSQV 531
            W  +LA++ITV  S  D+QG+  G++ +TVES  G GE +PR +   LP+   VI TPPRH+R+LWDQFH++ YPP YFPRD L    D LD  GDH HTNF+ +++ L ++GYY+E+LG   +CF A++YG LL+VDSE +   +E AKL++DV+E GLSVVVFADWY+  VM +V
Sbjct:  579 WSGWLAVAITVPASASDWQGVAQGRISLTVESPPGDGEQEPRQSAVDLPLKAKVIPTPPRHKRILWDQFHNLRYPPGYFPRDDLRAKNDPLDWNGDHIHTNFKDMYQHLRNAGYYLEVLGYPLTCFQAKNYGTLLIVDSEEEFFPEEVAKLKLDVEEEGLSVVVFADWYNVTVMRKV 755
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BLAST of mRNA_E-fasciculatus_F_contig12254.1745.1 vs. uniprot
Match: A0A3R7Q9G7_PENVA (Membrane-bound transcription factor site-1 protease n=4 Tax=Penaeus TaxID=133894 RepID=A0A3R7Q9G7_PENVA)

HSP 1 Score: 197 bits (502), Expect = 2.500e-55
Identity = 97/177 (54.80%), Postives = 125/177 (70.62%), Query Frame = 1 
Query:    1 WPSFLALSITVSESGQDFQGLVLGKLEVTVESEAGPGETQPRTTNAVLPVTVSVIRTPPRHRRLLWDQFHSVPYPPAYFPRDYLGDDADMLDRLGDHPHTNFRTLFEALLDSGYYVEILGSSWSCFDAESYGALLVVDSEADLGQDEKAKLEMDVKERGLSVVVFADWYSTDVMSQV 531
            W   LA+ ITV++SG+D++G   G + VTVES    GETQPRT++  LPV   VI TPPRH+R+LWDQFH++ YPP YFPRD L    D LD   DH HTNF+ +++ L +SGYYVE+LGS ++CFDA  YG L++VD E +   +E  KL  DV E GLSV+VFADWY+  VM +V
Sbjct:  780 WSGHLAVWITVADSGKDWEGFARGHISVTVESPPEEGETQPRTSHVKLPVKAKVIPTPPRHKRVLWDQFHNLRYPPGYFPRDNLRMTNDPLDWNADHIHTNFKDMYQHLRNSGYYVEVLGSPFTCFDASKYGTLMIVDPEEEYFPEEVTKLRRDV-ENGLSVIVFADWYNVSVMKKV 955
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BLAST of mRNA_E-fasciculatus_F_contig12254.1745.1 vs. uniprot
Match: A0A653C4W7_CALMS (Uncharacterized protein n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653C4W7_CALMS)

HSP 1 Score: 190 bits (483), Expect = 2.510e-55
Identity = 89/177 (50.28%), Postives = 124/177 (70.06%), Query Frame = 1 
Query:    1 WPSFLALSITVSESGQDFQGLVLGKLEVTVESEAGPGETQPRTTNAVLPVTVSVIRTPPRHRRLLWDQFHSVPYPPAYFPRDYLGDDADMLDRLGDHPHTNFRTLFEALLDSGYYVEILGSSWSCFDAESYGALLVVDSEADLGQDEKAKLEMDVKERGLSVVVFADWYSTDVMSQV 531
            W  ++A+ ++V+  G  ++GL  G + VTVES  GPGE QPR +   LP+   +I TPPRH+R+LWDQ+H++ YPP YFPRD L    D LD  GDH HTNF+ +++ L ++GYYVE+LGS ++CFDA  YG LL+VD E +   +E  KL+ DV + GLSV++FADWY+  VM +V
Sbjct:   62 WSGWMAVHLSVAAEGASYEGLAHGHVSVTVESPPGPGEQQPRRSTVNLPIRAKIIPTPPRHKRILWDQYHNLRYPPGYFPRDNLKIKNDPLDWNGDHIHTNFKDMYQNLRNTGYYVEVLGSPFTCFDASQYGTLLIVDPEEEYFPEEILKLKRDV-DAGLSVIIFADWYNVTVMKKV 237
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BLAST of mRNA_E-fasciculatus_F_contig12254.1745.1 vs. uniprot
Match: UPI000625E1B8 (membrane-bound transcription factor site-1 protease n=1 Tax=Orussus abietinus TaxID=222816 RepID=UPI000625E1B8)

HSP 1 Score: 197 bits (500), Expect = 4.360e-55
Identity = 92/177 (51.98%), Postives = 126/177 (71.19%), Query Frame = 1 
Query:    1 WPSFLALSITVSESGQDFQGLVLGKLEVTVESEAGPGETQPRTTNAVLPVTVSVIRTPPRHRRLLWDQFHSVPYPPAYFPRDYLGDDADMLDRLGDHPHTNFRTLFEALLDSGYYVEILGSSWSCFDAESYGALLVVDSEADLGQDEKAKLEMDVKERGLSVVVFADWYSTDVMSQV 531
            W  +LA++ITV  +  D+QG+  G + +T+ES  G GE +PR T   LP+   VI TPPRH+R+LWDQFH++ YPP YFPRD L    D LD  GDH HTNF+ +++ L ++GYY+E+LG+ ++CF A++YG LL+VDSE +   +E  KL+ DV E GLSVVVFADWY+  VM +V
Sbjct:  579 WSGWLAVAITVPSTASDWQGIAQGHISLTIESPPGDGEQEPRRTTIELPLKAKVIPTPPRHKRILWDQFHNLRYPPGYFPRDDLRAKNDPLDWNGDHIHTNFKDMYQHLRNAGYYLEVLGTPFTCFQAKNYGTLLIVDSEEEFFPEEVTKLKRDVDEEGLSVVVFADWYNVTVMRKV 755
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BLAST of mRNA_E-fasciculatus_F_contig12254.1745.1 vs. uniprot
Match: UPI001CA98759 (membrane-bound transcription factor site-1 protease n=1 Tax=Leptopilina heterotoma TaxID=63436 RepID=UPI001CA98759)

HSP 1 Score: 196 bits (499), Expect = 5.850e-55
Identity = 92/177 (51.98%), Postives = 128/177 (72.32%), Query Frame = 1 
Query:    1 WPSFLALSITVSESGQDFQGLVLGKLEVTVESEAGPGETQPRTTNAVLPVTVSVIRTPPRHRRLLWDQFHSVPYPPAYFPRDYLGDDADMLDRLGDHPHTNFRTLFEALLDSGYYVEILGSSWSCFDAESYGALLVVDSEADLGQDEKAKLEMDVKERGLSVVVFADWYSTDVMSQV 531
            W  +LA+SITV ES  D++G+  G + +T+ES    GET+PR +   L +T  +I TPPRH+R+LWDQ+H++ YPP YFPRD L    D LD  GDH HTNF+ +++ L + GYY+E+LGS + CF+A++YG LL+VDSE +   +E  KL+ DV+E+GLSVVVFADWY+  VM +V
Sbjct:  577 WSGWLAVSITVPESASDWRGIARGHISLTIESPPNAGETEPRRSTVELSLTAKIIPTPPRHKRILWDQYHNLRYPPGYFPRDDLRAKNDPLDWNGDHIHTNFKEMYQHLRNVGYYLEVLGSPFICFNAKNYGTLLIVDSEEEFFPEEIVKLKEDVEEKGLSVVVFADWYNVTVMEKV 753
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BLAST of mRNA_E-fasciculatus_F_contig12254.1745.1 vs. uniprot
Match: A0A8J5MXD5_HOMAM (Membrane-bound transcription factor site-1 protease-like n=2 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5MXD5_HOMAM)

HSP 1 Score: 196 bits (499), Expect = 6.200e-55
Identity = 95/177 (53.67%), Postives = 127/177 (71.75%), Query Frame = 1 
Query:    1 WPSFLALSITVSESGQDFQGLVLGKLEVTVESEAGPGETQPRTTNAVLPVTVSVIRTPPRHRRLLWDQFHSVPYPPAYFPRDYLGDDADMLDRLGDHPHTNFRTLFEALLDSGYYVEILGSSWSCFDAESYGALLVVDSEADLGQDEKAKLEMDVKERGLSVVVFADWYSTDVMSQV 531
            W   LA+ ITV+ESG++++GL  G + VT+ES    GETQPRT++  LPV   +I TPPRH+R+LWDQFH++ YPP YFPRD L    D LD   DH HTNF+ +++ L +SGYY+E+LGS ++CFDA  YG L+VVD E +   +E  KL  DV E+GLS++VFADWY+  VM +V
Sbjct:  805 WSGHLAVWITVAESGKEWEGLARGHISVTIESPPEEGETQPRTSHVKLPVKAKMIPTPPRHKRVLWDQFHNLRYPPGYFPRDNLRMTNDPLDWNADHIHTNFKDMYQHLRNSGYYIEVLGSPFTCFDASKYGTLMVVDPEEEYFPEEVTKLRHDV-EKGLSLIVFADWYNVSVMKKV 980
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12254.1745.1 vs. uniprot
Match: UPI001E672AF1 (membrane-bound transcription factor site-1 protease-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E672AF1)

HSP 1 Score: 196 bits (499), Expect = 6.340e-55
Identity = 94/177 (53.11%), Postives = 127/177 (71.75%), Query Frame = 1 
Query:    1 WPSFLALSITVSESGQDFQGLVLGKLEVTVESEAGPGETQPRTTNAVLPVTVSVIRTPPRHRRLLWDQFHSVPYPPAYFPRDYLGDDADMLDRLGDHPHTNFRTLFEALLDSGYYVEILGSSWSCFDAESYGALLVVDSEADLGQDEKAKLEMDVKERGLSVVVFADWYSTDVMSQV 531
            W   LA+ ITV+ESG++++G   G + VT+ES    GETQPRT++  LPV   +I TPPRH+R+LWDQFH++ YPP YFPRD L    D LD   DH HTNF+ +++ L +SGYY+E+LGS ++CFDA  YG L++VD E +   +E  KL  DV E+GLSV+VFADWY+ +VM +V
Sbjct:  787 WSGHLAVWITVAESGKEWEGFARGHISVTIESPPEEGETQPRTSHVKLPVKAKMIPTPPRHKRVLWDQFHNLRYPPGYFPRDNLRMTNDPLDWNADHIHTNFKDMYQHLRNSGYYIEVLGSPFTCFDASKYGTLMIVDPEEEYFPEEVTKLRRDV-EKGLSVIVFADWYNVNVMKKV 962
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12254.1745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUM0_ECTSI2.000e-10793.79Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5K166_9PHAE6.550e-10290.96Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
UPI00158ABAC39.310e-5651.98membrane-bound transcription factor site-1 proteas... [more]
A0A6J0B8X2_NEOLC2.340e-5553.11membrane-bound transcription factor site-1 proteas... [more]
A0A3R7Q9G7_PENVA2.500e-5554.80Membrane-bound transcription factor site-1 proteas... [more]
A0A653C4W7_CALMS2.510e-5550.28Uncharacterized protein n=1 Tax=Callosobruchus mac... [more]
UPI000625E1B84.360e-5551.98membrane-bound transcription factor site-1 proteas... [more]
UPI001CA987595.850e-5551.98membrane-bound transcription factor site-1 proteas... [more]
A0A8J5MXD5_HOMAM6.200e-5553.67Membrane-bound transcription factor site-1 proteas... [more]
UPI001E672AF16.340e-5553.11membrane-bound transcription factor site-1 proteas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12254contigE-fasciculatus_F_contig12254:433..3691 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score346.3
Seed ortholog evalue8.6e-93
Seed eggNOG ortholog2880.D7FUM0
Preferred nameMBTPS1
KEGG koko:K08653
KEGG Pathwayko04141,map04141
GOsGO:0000139,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0005794,GO:0005795,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006606,GO:0006629,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006970,GO:0006972,GO:0006984,GO:0006986,GO:0006991,GO:0006996,GO:0007033,GO:0007040,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008237,GO:0009628,GO:0009651,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016485,GO:0016787,GO:0017038,GO:0017171,GO:0019216,GO:0019218,GO:0019219,GO:0019222,GO:0019538,GO:0023052,GO:0030968,GO:0031090,GO:0031293,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031984,GO:0032933,GO:0033036,GO:0033365,GO:0033554,GO:0033619,GO:0034504,GO:0034613,GO:0034620,GO:0034976,GO:0035103,GO:0035966,GO:0035967,GO:0036211,GO:0036500,GO:0042175,GO:0042221,GO:0042538,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045540,GO:0045893,GO:0045935,GO:0045944,GO:0046890,GO:0046907,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0062012,GO:0065007,GO:0070011,GO:0070013,GO:0070727,GO:0070887,GO:0071310,GO:0071501,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0080090,GO:0080171,GO:0090181,GO:0098588,GO:0098791,GO:0098827,GO:0106118,GO:0140096,GO:1901564,GO:1902680,GO:1902930,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.serine-type endopeptidase activity
EggNOG OGsCOG1404@1,KOG4266@2759
EC3.4.21.112
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03110
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPeptidase S8/S53 domain
Ec32 orthologEc-13_004200.2
Exons4
Model size534
Cds size534
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12254.1745.1prot_E-fasciculatus_F_contig12254.1745.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12254 433..3691 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927733.3689957-CDS-E-fasciculatus_F_contig12254:432..5981622927733.3689957-CDS-E-fasciculatus_F_contig12254:432..598Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12254 433..598 -
1695995670.98878-CDS-E-fasciculatus_F_contig12254:432..5981695995670.98878-CDS-E-fasciculatus_F_contig12254:432..598Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12254 433..598 -
1622927733.3898082-CDS-E-fasciculatus_F_contig12254:949..10641622927733.3898082-CDS-E-fasciculatus_F_contig12254:949..1064Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12254 950..1064 -
1695995670.9990668-CDS-E-fasciculatus_F_contig12254:949..10641695995670.9990668-CDS-E-fasciculatus_F_contig12254:949..1064Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12254 950..1064 -
1622927733.401266-CDS-E-fasciculatus_F_contig12254:2127..22991622927733.401266-CDS-E-fasciculatus_F_contig12254:2127..2299Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12254 2128..2299 -
1695995671.0071023-CDS-E-fasciculatus_F_contig12254:2127..22991695995671.0071023-CDS-E-fasciculatus_F_contig12254:2127..2299Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12254 2128..2299 -
1622927733.4128828-CDS-E-fasciculatus_F_contig12254:3610..36911622927733.4128828-CDS-E-fasciculatus_F_contig12254:3610..3691Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12254 3611..3691 -
1695995671.0187838-CDS-E-fasciculatus_F_contig12254:3610..36911695995671.0187838-CDS-E-fasciculatus_F_contig12254:3610..3691Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12254 3611..3691 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12254.1745.1

>prot_E-fasciculatus_F_contig12254.1745.1 ID=prot_E-fasciculatus_F_contig12254.1745.1|Name=mRNA_E-fasciculatus_F_contig12254.1745.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=178bp
WPSFLALSITVSESGQDFQGLVLGKLEVTVESEAGPGETQPRTTNAVLPV
TVSVIRTPPRHRRLLWDQFHSVPYPPAYFPRDYLGDDADMLDRLGDHPHT
NFRTLFEALLDSGYYVEILGSSWSCFDAESYGALLVVDSEADLGQDEKAK
LEMDVKERGLSVVVFADWYSTDVMSQV*
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mRNA from alignment at E-fasciculatus_F_contig12254:433..3691-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12254.1745.1 ID=mRNA_E-fasciculatus_F_contig12254.1745.1|Name=mRNA_E-fasciculatus_F_contig12254.1745.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3259bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12254:433..3691- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TGGCCCAGCTTCCTCGCGCTGTCGATAACCGTGTCAGAGTCCGGCCAGGA
CTTCCAGGGCCTGGTGCTCGGCAAGCTAGAGGTGCGTGAAAACGGACCGC
CTTCGGGAGGGTACTTTTATGTATCTATGATATAGAGGGGGGGTGGTGGT
ACCCTATCCCTATCGCTAACCCACAACCCAACCAACCCCGTACCTCCTAC
TATAACCAAGCCTTCGGGAGGGCATTTTTTTTAGCTATGATATATAGAGT
GGGGGGTGTCGTATTCGTATCCCTATCGCTAACCCCGGGCCCAACCAACC
CCGTACCCCCTACTACAACCAAGCTTCGTGTTCTTGCGGAGGCTACAGGC
GAGAACAGGTCGTCCCCCCCCATCACCTCTCCGGTTGTTTGGTTTCTGTT
GTGGTAGGTTTTGTGTGCCTCGGTCTGACGGTTTCGTCGTTTCGTGGTTC
CCCCGTGCCAGACCCAAGAGGTGTGCTTGTCCCTATTCCGTATTATTTCA
TCGTTTCCTGCCCCCACTCCAGGCGCAAGAGGTGTACATTGACGGTGCGC
TTCTCCCTATGTATCCCGATGATTTCATCGTTTCCTGCCCCCATTTCACA
CCCAAGCGAGGTGTATTTGACGGTTTGCTTCTTCCTATTCGGTATGACTT
ATCGTTTCTTGCCCCCATTCCACACGTAAGCGAGGTGTATATTGACGGCG
TGTTTTTCCCTAGTCCGATTATGTCATCGTTTCCTGCCCCCATTCCAGTC
CCCAAGAGGTGTGTATTGATGGCGTGCTTGTCCTTAACTTTGAGACTGTT
TCATCGGTTCGTGCTCCCATGCCTGATCCCGAACGCCTTCGCGAGAAACT
AAGAAAATCGTGCGGGAATAGTACAGGGAAGGGCCACGCAGACCCTATCA
TCCCTAACCCTCACCCTGACGTAACTCCCCCGATTGCATGCTTTATCTAA
CATGTTTACTTTATCGGAACTTTCGCTGCTGTACAATAACTCAAAAATGT
GGCCTATGAGGGATCCATCCCAGCGGGGAACACGTGTGTTTAGCGTCGTG
GCATGGAATTCGGCATGTTTCGCTACTCTACAGTAGCTGCCCTCGAGATG
TGAAGACTCGGCAGCGGTAACGACAAATGTGACGAGCCATCTGGAGCTGA
CAGTAGTCGGGCTACAAAAACTAGGGCAAGCTCGCTTGGCCGAGACTGAA
ACTACTGCTGTGGGATAGCAATCGACGCGCGGACGGATCGAGCAGCTGGA
AAGGTTATACCCAAGGGAAATAAAGCCCAGGCAAAAAATACACCTCGTGG
ATCAGGCAGTAGGCGAACTCCATATGCCACGACGCTAACATACGCTGCTA
TGTTTCCACGCTGGGATGGACGAATGCATCGGAACCCCGCAGGTGACTGT
GGAGTCAGAGGCGGGGCCCGGAGAGACCCAACCCCGAACCACGAACGCCG
TCCTGCCGGTAACGGTTAGCGTCATCCGCACGCCGCCCAGGCACCGCAGG
CTGCTCTGGGACCAGTTTCACAGCGTACCGTATCCTCCGGCCTACTTTCC
GAGGGACTACCTAGGTGACCCTCTTTATCTTATTGATTTATTTTTTTATT
TTTTTATTTTGTCTTCGCGAGTGGTCGGGTGTTTTTCGTCTGTACCGCTG
TTATAGGTTTCTCCGCGACCATGTTTGGTTTCGTCCTCCTACCTGGATGT
TGACCTTTTGTGTATTTCGGAACAATTTCTTAGCACACCAGCCGAGGTTA
CACGGGATAACGGAAGACCGCACGGGAGTTTAATTTTGGGGGGGGGAGGG
CGAGGTTTCCTGGAGGGCCACGGAAGAAGAAGAAACGGTGCTGAATAGAT
TACGGACTGGTCCGCTCAACGCGAAATTTCGATGGGCAAGACCAGACCTT
GGCGGTAGATTTGTACATCCATCGTCTGACCTGTTGACGAAATTGTGCCA
CGGTGAGACTCAATGTGGCGATCAGTTTCATCTCCTGGCGGGAGCGGACA
CCGTCGAGTATCTGCTTTTCGGCCGGTAACCTTTCTCCAAGATAATTGGT
CAGAGACCCACCGTAGGGATCAAGCCCACGACGTCAATCCGTGCGCCGGG
TAGACACCATCATGGAAGTTTCCAGCAAGTATCTAACAGGTTTCGGCCTG
GCTCGAGAGGAGGCGGGCGGTCTTTTGGCGGTGTATTTGTTTTTCGAAAA
CGCCACGCACTGTTTCGAAGGGGGAGGTGTCGCATGCCAGTACAATACTT
GCAAAGGGTGGCGTTTTGTAGGGTGTACTACCAAAGTGCACCGGCGGTCC
TCTTCCGGGCATCTACCCTTCAGAACGTTACAGGCGACTACATTTTGTCA
TCGTCCACCAATCCTTGGAACTCCCTATGAACAAAGCCTCCGCATACCTT
GTTGGGTCATAAAGTCTGGCGGGGCTGGCGTGTGATAGGGGACGCTAAAG
CACAGCGGCCGCCCGCTGCCCGTGTCTGCCACAGGTTTGTGCGTGTGTTA
TGTGCGACTTTTCTCCTTCTCCGTCAGGTGTTCGATATGGCAAGAGAATG
CCACAAGATCATACAGTGTTTGTCTTTTGTCTCACTGTCGGCCGGTCGCC
GTTTTTTGTGTGTCTCTCTTCCACCAGGCGACGATGCGGACATGCTGGAC
CGGCTGGGAGACCACCCTCACACCAACTTCCGGACCCTGTTCGAGGCTCT
GTTAGACTCGGGCTATTACGTGGAGATCCTTGGATCCAGCTGGTAAAGAA
GCATGTTCTTCAGGCACCCAAAAAAAACGTCACGATTCTTTTTTCAACGG
GTCTCCCCCGAACCCCCAAAACGAAAAAACAGCTATGCGTACAGCATAAC
TGTTTTTTGAACACTTTGGATTGTCTTTCCCTCAGACGACAAAACGTGTA
ACAGCTACAGCAGGACCTGTTTACTGAACATTTTGGATGTATCTTCCCCC
CAAAAAACGAGAAGTAAAAGCAGCTACAGTACTGCGTACTGAACCTTGTG
GATTCGTCTTCCGCAATAACACCAAACGCACTAACTGTTTATTGCACATG
CACACACACTACACATAAGTTTACAAACATTTGCTGCTTGCAGGTCCTGC
TTCGATGCTGAGAGCTACGGAGCGCTGCTTGTGGTCGACTCAGAGGCCGA
CCTGGGGCAGGACGAAAAAGCCAAGCTCGAGATGGACGTGAAGGAGAGAG
GGCTGTCGGTGGTGGTGTTCGCCGATTGGTACAGCACGGATGTCATGTCC
CAGGTATGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12254:433..3691-

>mRNA_E-fasciculatus_F_contig12254.1745.1 ID=mRNA_E-fasciculatus_F_contig12254.1745.1|Name=mRNA_E-fasciculatus_F_contig12254.1745.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1068bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12254:433..3691- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TGGCCCAGCTTCCTCGCGCTGTCGATAACCGTGTCAGAGTCCGGCCAGGA
CTTCCAGGGCCTGGTGCTCGGCAAGCTAGAGTGGCCCAGCTTCCTCGCGC
TGTCGATAACCGTGTCAGAGTCCGGCCAGGACTTCCAGGGCCTGGTGCTC
GGCAAGCTAGAGGTGACTGTGGAGTCAGAGGCGGGGCCCGGAGAGACCCA
ACCCCGAACCACGAACGCCGTCCTGCCGGTAACGGTTAGCGTCATCCGCA
CGCCGCCCAGGCACCGCAGGCTGCTCTGGGACCAGTTTCACAGCGTACCG
TATCCTCCGGCCTACTTTCCGAGGGACTACCTAGGTGACTGTGGAGTCAG
AGGCGGGGCCCGGAGAGACCCAACCCCGAACCACGAACGCCGTCCTGCCG
GTAACGGTTAGCGTCATCCGCACGCCGCCCAGGCACCGCAGGCTGCTCTG
GGACCAGTTTCACAGCGTACCGTATCCTCCGGCCTACTTTCCGAGGGACT
ACCTAGGCGACGATGCGGACATGCTGGACCGGCTGGGAGACCACCCTCAC
ACCAACTTCCGGACCCTGTTCGAGGCTCTGTTAGACTCGGGCTATTACGT
GGAGATCCTTGGATCCAGCTGGCGACGATGCGGACATGCTGGACCGGCTG
GGAGACCACCCTCACACCAACTTCCGGACCCTGTTCGAGGCTCTGTTAGA
CTCGGGCTATTACGTGGAGATCCTTGGATCCAGCTGGTCCTGCTTCGATG
CTGAGAGCTACGGAGCGCTGCTTGTGGTCGACTCAGAGGCCGACCTGGGG
CAGGACGAAAAAGCCAAGCTCGAGATGGACGTGAAGGAGAGAGGGCTGTC
GGTGGTGGTGTTCGCCGATTGGTACAGCACGGATGTCATGTCCCAGGTAT
GAGTCCTGCTTCGATGCTGAGAGCTACGGAGCGCTGCTTGTGGTCGACTC
AGAGGCCGACCTGGGGCAGGACGAAAAAGCCAAGCTCGAGATGGACGTGA
AGGAGAGAGGGCTGTCGGTGGTGGTGTTCGCCGATTGGTACAGCACGGAT
GTCATGTCCCAGGTATGA
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