prot_E-fasciculatus_F_contig1225.1742.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1225.1742.1
Unique Nameprot_E-fasciculatus_F_contig1225.1742.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length953
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1225.1742.1 vs. uniprot
Match: D7FIW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIW6_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 2.490e-9
Identity = 43/56 (76.79%), Postives = 45/56 (80.36%), Query Frame = 0 
Query:  309 VSDMVAKMESAIVESDSTAAVVAPPSGGLDVGLGVPGPTVVAAPSGEMPDAAIDAP 364
            VSDMVAKMESAIV  DSTAAVVAP + G   GLGV GPTV AAPSGEMPD A+D P
Sbjct:   89 VSDMVAKMESAIVGPDSTAAVVAPATDG---GLGVSGPTVDAAPSGEMPDIAVDTP 141
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1225.1742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIW6_ECTSI2.490e-976.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23348:SF41NEUROBLAST DIFFERENTIATION-ASSOCIATED PROTEIN AHNAKcoord: 222..653
coord: 481..882
NoneNo IPR availablePANTHERPTHR23348PERIAXIN/AHNAKcoord: 222..653
coord: 481..882

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1225contigE-fasciculatus_F_contig1225:6942..14275 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1225.1742.1mRNA_E-fasciculatus_F_contig1225.1742.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1225 6860..16873 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1225.1742.1 ID=prot_E-fasciculatus_F_contig1225.1742.1|Name=mRNA_E-fasciculatus_F_contig1225.1742.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=953bp
MGCTSSKEQAAAGASAPAAAPPADLVVKPTEGKAGATPVAVDAAAPAKAT
ATDSAAPAAVAEETKTETDPTAAAAAGAAAPAVVSDTASTATTAAKTAAA
AAPAAASSTTTAADTAAAPSRGEVAPPADAAVAAATGAAGEAEAAADKAT
DVTAAGGAAEDAAATVPKAEATPVEAPAAAAVPAVDAPATTSTSTTAVPA
EVEKAAADATAAVPETAATTTEAAAPAVDTAVPASSTEPPSVDASAAVPV
AVAAETPAVVDTPSVDNPAAAPGGAVEVPAAAAGAASPAAEAAVENGAPE
AEAGGQRSVSDMVAKMESAIVESDSTAAVVAPPSGGLDVGLGVPGPTVVA
APSGEMPDAAIDAPAVDAPDVTAPAVEVPSASVEVPDVTAPAVGATAPAA
EVPSADVKTPAIEVPAVDTPAVDTPSVDIPAVEVPSASVEVPDVTAPAVE
ATAPAAEVPSADVKTPAIEVPSVDTPAVDTPSVDIPAVEVPSASVEVPDV
TAPVVEVTAPTAEMPSADVKTPSIEVPSVDTPAVDTPAVEMPSASAEVSA
PAVGVPSASVKVPDVTAPAVEVAAPATEVPSVDANTPAIEVPSVDTPAVD
TRAVETPAADTPAVEVPSASVEAPDVTAPAVEVAAAAAAEVPSVSVETPA
VDVPSVGGDARSIKVPDVSAPAVEVAAAVEAPSVSVDTSAVDVPEVPAVD
TPAVEVPSAAVEVPDVSAPAVEVAAAAAAVEAPSVAVDTPAVEVPAVGVD
APVVDVKAPEVPDVSVEAPAVEPEIPAVGVEAPTVDVKAPEVAAVSVEAP
AVEPEIPAVSVEAPAVEVKSPEIPAVGVEAPAVEVKAPEVPDVSVEAPAV
EVKAPEVPDVSVEAPAVDVTSSEAEAPAVEVKVKAPEAASAAAVAEKTKT
AAGAEEAVLKGAAAVAAVATPAVAAVAAPKATVQKGSNSTSSKKKKKKRN
KK*
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