prot_E-fasciculatus_F_contig1225.1741.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1225.1741.1
Unique Nameprot_E-fasciculatus_F_contig1225.1741.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length466
Homology
BLAST of mRNA_E-fasciculatus_F_contig1225.1741.1 vs. uniprot
Match: A0A6H5JW67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW67_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 3.400e-50
Identity = 253/386 (65.54%), Postives = 272/386 (70.47%), Query Frame = 0
Query:   53 RQGREGRVEGLLVFGRSQRPNGLEGELYFPDVVPKVDPVDFHDSGEEESGNYDLIEDLVTEETYKVAKDQALEFYASGNGPRLERARARAXXXXXXXXXXXXXXXXXXXXXXXXXXGTPSGLAPQHGSSNDEGNRGRSARSGGRGGFSFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEALEEDEERYWSETPSGVFASSSXXXXXXXXXXXXXXXXPEARPIAADATSTAVNVGDGIAGNGAAPPRLSAASGCDSGSSGG--AAPQAGGDVVGAGGAASTSGAVVGAGVQANGGASGASTESVGAGENDMDVDGEEEAGLAAGKGXXPAXXXXAARGVAARQSQRES 436
            RQG+ GRV+G+L++GRS+ PNGLEGE +FPDVVPKVDPVDFHDSGEEESGNYDL+EDLVTEETYKVAKDQALEFYASG+GPRLERA    XXXXXXXXXXXXXXXXXXXXXX    GT SGL P+ GSS+                 S  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXX EEALEED ERYWSETPSGVFASSSXXXXXXXXXXXXXX  P+AR IAA A S A   GD + GNGAA PRL AA+G  +G+SG   A+ +  G VVGA    S SG V            GAS E V AGENDMD              XX  XXXX   GV ARQSQR+S
Sbjct:   24 RQGQAGRVDGILLWGRSELPNGLEGEQFFPDVVPKVDPVDFHDSGEEESGNYDLVEDLVTEETYKVAKDQALEFYASGSGPRLERAXXXXXXXXXXXXXXXXXXXXXXXXXXASG-GTSSGLVPRQGSSDXXXXXXXXXXXXXXVRSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGENGGTKKKDDGADXXXXXXXXXXREEALEEDLERYWSETPSGVFASSSXXXXXXXXXXXXXXR-PDARLIAATAASGADQSGDRVGGNGAARPRLGAATGRANGASGSGDASLENRGGVVGA---YSASGGVXXXXXXXXXXXXGASAEKVRAGENDMDXXXXXXXXXXXXXXXXXXXXXXXXXGVDARQSQRDS 404          
BLAST of mRNA_E-fasciculatus_F_contig1225.1741.1 vs. uniprot
Match: D7FIW7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIW7_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 3.720e-32
Identity = 140/399 (35.09%), Postives = 154/399 (38.60%), Query Frame = 0
Query:   53 RQGREGRVEGLLVFGRSQRPNGLEGELYFPDVVPKVDPVDFHDSGEEESGNYDLIEDLVTEETYKVAKDQALEFYASGNGPRLERARARAXXXXXXXXXXXXXXXXXXXXXXXXXXGTPSGLAPQHGSSNDEGNRGRSARSGGRGGFSFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEALEEDEERYWSETPSGVFASSSXXXXXXXXXXXXXXXXPEARPIAADATSTAVNVGDGIAGNGAAPPRLSAASGCDSGSSGGAAPQAGGD--VVGAGGAASTSGAVVGAGVQANGGASGASTESVGAGENDMDVDGEEEAGLAAGKGXXPAXXXXAARGVAARQSQRESDGKGLAGEADSDD 449
            RQG+ GRV G+L++GRS+ PNGLEGE +FPDVVPKVDPVDFHD+GEEESGNYDL+EDLVTEETYK                                                                                                                                                                                              PEAR +AA A S A   GDG+ GNGAA PRL  ASG  +G+S            VVGA    S S  V GA VQANGG SGAS E + AGENDMDVD EEE G  A KG  PA    AARGV ARQSQRES+GKGLAGE DSDD
Sbjct:   30 RQGQAGRVGGILMWGRSELPNGLEGEHFFPDVVPKVDPVDFHDAGEEESGNYDLVEDLVTEETYK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PEARHMAATAASEADKSGDGVGGNGAARPRLGGASGRANGTSXXXXXXXXXXXXVVGA---DSASXGVAGASVQANGGTSGASAERIRAGENDMDVDEEEEGGSVAEKGKGPARRPAAARGVDARQSQRESEGKGLAGEVDSDD 235          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1225.1741.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JW67_9PHAE3.400e-5065.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIW7_ECTSI3.720e-3235.09Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1225contigE-fasciculatus_F_contig1225:3340..6101 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1225.1741.1mRNA_E-fasciculatus_F_contig1225.1741.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1225 3340..6167 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1225.1741.1 ID=prot_E-fasciculatus_F_contig1225.1741.1|Name=mRNA_E-fasciculatus_F_contig1225.1741.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=466bp
MSTLMEGESSQRPIALDDGGAEASATKSDEAGGAGASARPSSAAQEAGSA
ARRQGREGRVEGLLVFGRSQRPNGLEGELYFPDVVPKVDPVDFHDSGEEE
SGNYDLIEDLVTEETYKVAKDQALEFYASGNGPRLERARARAARAAKNRN
ARRRRRRPAGGNSGNGSGGTPSGLAPQHGSSNDEGNRGRSARSGGRGGFS
FVRSSGNGGGDGSGSSSSDGSTSSGYSSYGGRSTSGSDSSDGENGGKKNK
KGDPADGLEGVEGRGGREEALEEDEERYWSETPSGVFASSSSSSSSSTSS
DSEARARPEARPIAADATSTAVNVGDGIAGNGAAPPRLSAASGCDSGSSG
GAAPQAGGDVVGAGGAASTSGAVVGAGVQANGGASGASTESVGAGENDMD
VDGEEEAGLAAGKGKGPARGPAAARGVAARQSQRESDGKGLAGEADSDDG
EESSGSETEGGSSSDG
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