prot_E-fasciculatus_F_contig12249.1739.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12249.1739.1
Unique Nameprot_E-fasciculatus_F_contig12249.1739.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length218
Homology
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: D7FZH9_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH9_ECTSI)

HSP 1 Score: 376 bits (965), Expect = 8.320e-125
Identity = 188/218 (86.24%), Postives = 205/218 (94.04%), Query Frame = 0
Query:    1 AFPGKVVVLAGDTRQLPPVVPNGGEADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDGISPTDEAGLTTITGVRTEQALDAATDFVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDPDVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVVVAIQPYTLQVQ 218
            AFPGKVVVLAGDTRQLPPVVPNGGEA+TTAASVLSSA+YRDNVEIFH SKTMRNKDDP +SKMVDDIGDG+S  DEAGL TITGVRTE+ALD A DFVFP DVLQ+PSACAKRG+ISTHNDSVARVNAAVLARV+GET TL+ RTMLDH+HLDPDVDDFFRMSQFLNQ+E+SGVPSH+I+L   VVVMLCRNLSIDDCLTNGTKVVVVAIQP+TL++Q
Sbjct:  327 AFPGKVVVLAGDTRQLPPVVPNGGEAETTAASVLSSAYYRDNVEIFHLSKTMRNKDDPRYSKMVDDIGDGVSDIDEAGLITITGVRTEEALDVAIDFVFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARVNGETYTLQGRTMLDHKHLDPDVDDFFRMSQFLNQMEHSGVPSHDINLNVGVVVMLCRNLSIDDCLTNGTKVVVVAIQPFTLKLQ 544          
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: A0A6H5KSD8_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD8_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 1.270e-88
Identity = 149/218 (68.35%), Postives = 170/218 (77.98%), Query Frame = 0
Query:    1 AFPGKVVVLAGDTRQLPPVVPNGGEADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDGISPTDEAGLTTITGVRTEQALDAATDFVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDPDVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVVVAIQPYTLQVQ 218
            AFP KV V+AGDTRQLPPVV NGGE++TTAASVLSSAFYRDNV++FH + TMRNKDDP FSKMVD IGDG +P D  GL T+TGV T  +L++A DFVFP  VLQ+P+ACAKRG+ISTHNDSVARVNAAVL+RV G+  TLR RTMLDHE +DPD                SG+PSHEI LK  VVV LCRN+SID  LTNGTKVVV  IQ YTL+V+
Sbjct:  282 AFPKKVFVIAGDTRQLPPVVANGGESETTAASVLSSAFYRDNVDVFHLNTTMRNKDDPDFSKMVDAIGDGEAPVDADGLVTMTGVDTALSLESAIDFVFPYYVLQNPTACAKRGIISTHNDSVARVNAAVLSRVQGDMFTLRGRTMLDHEQMDPD----------------SGIPSHEIKLKVGVVVRLCRNMSIDARLTNGTKVVVQEIQSYTLRVK 483          
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: D7FRZ0_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRZ0_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 5.780e-86
Identity = 131/161 (81.37%), Postives = 143/161 (88.82%), Query Frame = 0
Query:   52 MRNKDDPGFSKMVDDIGDGISPTDEAGLTTITGVRTEQALDAATDFVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDPDVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVVVAIQP 212
            MRNKDDP FSKMVDDIG+G+S  DEAGLTTITGVRTEQALD   DF FP DVLQ+PSACAKRG+ISTHNDSVARVNAAVLAR++GET TL+ RTMLDHEHLDPDVDDFFRMSQFLNQ+E S VPSH+I+LK  VVV+LCRNLSIDDCLTNGTKVV+    P
Sbjct:    1 MRNKDDPRFSKMVDDIGNGVSDIDEAGLTTITGVRTEQALDVVIDFGFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARMNGETCTLQGRTMLDHEHLDPDVDDFFRMSQFLNQMEPSSVPSHDINLKVGVVVLLCRNLSIDDCLTNGTKVVLSRFNP 161          
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: UPI001ED89BAA (ATP-dependent DNA helicase PIF1-like n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED89BAA)

HSP 1 Score: 124 bits (311), Expect = 2.510e-29
Identity = 79/213 (37.09%), Postives = 117/213 (54.93%), Query Frame = 0
Query:    1 AFPGKVVVLAGDTRQLPPVVPNGGEADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDGISPTDEAG---LTTITGVRTEQALDAATDFVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDP---DVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVV 207
            AF GKVVVLAGD RQ+PP++P+G +AD   AS+ SS  +   ++    S  +R++DD  +S+ V  +G+   PT   G      +  +    +L    DFV+P DVL +P+ C  R ++S  N +++ +N  VL  + GE   L S      +   P    VD+    S  LN + +SGVP H + LK   V +L RN+S +D L NGTKV+V
Sbjct:  259 AFGGKVVVLAGDFRQIPPIIPDGSKADIIGASLKSSELWPIIIKKKLRS-ILRSRDDRAYSEFVLAVGEDRVPTVAMGEYQTIPLGSISFTTSLQELIDFVYPADVLSNPALCCNRAILSGTNHNISEINRFVLDMIPGEIVRLCSA-----DSTPPCAGAVDNTLIHSDVLNAISHSGVPDHILELKVGCVAILIRNISFEDRLVNGTKVIV 465          
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: UPI001ED8A18C (ATP-dependent DNA helicase PIF1-like n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8A18C)

HSP 1 Score: 122 bits (307), Expect = 8.370e-29
Identity = 78/213 (36.62%), Postives = 117/213 (54.93%), Query Frame = 0
Query:    1 AFPGKVVVLAGDTRQLPPVVPNGGEADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDGISPTDEAG---LTTITGVRTEQALDAATDFVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDP---DVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVV 207
            AF GKVVVLAGD RQ+PP++P+G +AD   AS+ SS  +   ++    S  +R++DD  +SK V  +G+   PT   G      +  +    +L    DFV+P DVL +P+ C  R ++S  N +++ +N  VL  + GE   L S      +   P    VD+    +  LN + +SGVP H + LK   V +L RN+S +D L NGTKV++
Sbjct:  259 AFGGKVVVLAGDFRQIPPIIPDGSKADIIDASLKSSVLWPIIIKKKLRS-ILRSRDDRAYSKFVLAVGEDRVPTVAMGEYQTIPLGSISFTTSLQELIDFVYPADVLCNPALCCNRAILSGTNHNISEINRFVLDMIPGEIVRLCSA-----DSTPPCAGAVDNTLIHTDVLNAISHSGVPDHILELKVGCVAILIRNISFEDRLVNGTKVII 465          
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: UPI00103A3A51 (uncharacterized protein LOC114364057 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103A3A51)

HSP 1 Score: 122 bits (305), Expect = 2.780e-28
Identity = 80/220 (36.36%), Postives = 117/220 (53.18%), Query Frame = 0
Query:    2 FPGKVVVLAGDTRQLPPVVPNG-GEADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDGISP--TDEAGLTTITGVRTEQALDAATD------FVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDPDVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVVVAIQP 212
            F GK+V+ AGD RQ+PPVV      +D    SV SS  + + ++IF+ S + RN+DDP +S  +  +G    P  T +   + +  V     L   TD      FVF   V+ +P  CA R +++THN +V  +N+ VL RV+ E     S   +  E+     D+ F  +  LN+++  GVP H++ LK   V M+ RNLS  D L NGTKV+VV   P
Sbjct:  755 FGGKIVIFAGDFRQIPPVVVRAKSNSDIINCSVKSSPIW-EQIKIFNLSTSQRNRDDPEYSDFLLKLGSNQLPVQTLKVNRSVLNLVDLTSHLSYVTDLNDLIDFVFSHVVIVEPDTCAGRAILTTHNQNVREINSIVLDRVESELLHFYSIDKVVSEN----TDEIFLGADALNKLQPKGVPEHDLKLKVGCVCMIIRNLSFSDRLVNGTKVIVVKTTP 969          
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: UPI001ED8867E (uncharacterized protein LOC124173554 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8867E)

HSP 1 Score: 117 bits (293), Expect = 1.170e-26
Identity = 75/216 (34.72%), Postives = 117/216 (54.17%), Query Frame = 0
Query:    1 AFPGKVVVLAGDTRQLPPVVPNGGEADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDGISPTDEAGLTTITGVR---TEQALDAATDFVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTML------DHEHLDPDVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVV 207
            AF GKV+VLAGD RQ+PP++P+G + D   AS+ SS  +  N+        +R+++D  ++  V ++G+   P+   G+     +R      +L+   +FV+P DVL +P  C +R ++S  N ++A +NAAVL  +  E   L S          D+ H+  DV         LN V ++GVP H + LK   +V+L RN+S  D L NGTK+ V
Sbjct: 1218 AFGGKVMVLAGDFRQIPPIIPDGAKVDIIEASLKSSQLWP-NIIKKRLRTILRSREDQDYTDFVLEVGENKVPSISIGIYRPIPLRMIINATSLEDLMNFVYPRDVLFNPEQCVRRAILSGTNLNIAEINAAVLRMLPNEAVRLCSADSTPCAGPEDNVHIHTDV---------LNNVSHTGVPDHILELKVGCMVILIRNISFTDGLVNGTKLFV 1423          
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: A0A6H5GVM8_9HEMI (ATP-dependent DNA helicase (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GVM8_9HEMI)

HSP 1 Score: 113 bits (283), Expect = 2.600e-25
Identity = 77/213 (36.15%), Postives = 113/213 (53.05%), Query Frame = 0
Query:    2 FPGKVVVLAGDTRQLPPVVPNGGEADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDG-ISPTDEAGLTTIT--GVRTEQALDAATDFVFP--GDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDPDVDD--FFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVV 207
            F GK++V AGD RQ+PP+VP+    D   ASV SS F+ + + +F  S   R   D  FS+ +  +G+G + P   A  T I    ++T   L+   DFV+P   D +++P     R V+S  N ++  +N  VL R  G+   L S      +    DVDD  F  + +FL+ + + GVP H++ LK   V  + RNLS D  L NGTKV+V
Sbjct: 1815 FGGKIIVFAGDFRQIPPIVPSNTPVDVVNASVKSSPFWAE-LNVFTLSTAQRTAGDELFSRFLLAVGEGRVEPVRVADETLIPLRNIQTVSNLNDLIDFVYPPNDDSIENPDLSRSRTVLSGTNAAIDDINRTVLDRCPGDVIHLYSA-----DRTTSDVDDPRFLPLPEFLHSLTHPGVPDHDLQLKIGSVCTVLRNLSFDCGLVNGTKVIV 2021          
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: UPI001E68D7A0 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E68D7A0)

HSP 1 Score: 109 bits (273), Expect = 9.630e-25
Identity = 75/226 (33.19%), Postives = 118/226 (52.21%), Query Frame = 0
Query:    2 FPGKVVVLAGDTRQLPPVVPNGGE-ADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDG--------ISPTDEAGLTTITGVRTEQALDAATDFVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDPDVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVVVAIQPYTLQVQ 218
            F GK+++ AGD RQ+PPVV +    +D   ASV SS  ++  ++ F    + R +DD  FS+ +  +G           + T E  L  ++ +     LD   DFV+P  +L +P  C  R ++STHN SV  +NA +L  +  +     S   +D E +  + D  F     LN+++  G+P H+++LK   V M+ RNL+  D L NGTKV+VV   P  + V+
Sbjct:   63 FGGKIIIFAGDYRQIPPVVVDAKHNSDVFNASVKSSPIWQ-KLKTFSLVTSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVE-NLVNLSMISFVSKLDDLIDFVYPNVILTEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYS---ID-EVVSDNADQIFLGVDALNRMQPKGIPEHDLTLKVGCVCMIIRNLNFSDKLVNGTKVIVVNTSPRLITVR 282          
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: UPI001E688A66 (uncharacterized protein LOC123868181 n=2 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E688A66)

HSP 1 Score: 109 bits (272), Expect = 7.250e-24
Identity = 75/226 (33.19%), Postives = 118/226 (52.21%), Query Frame = 0
Query:    2 FPGKVVVLAGDTRQLPPVVPNGGE-ADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDG--------ISPTDEAGLTTITGVRTEQALDAATDFVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDPDVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVVVAIQPYTLQVQ 218
            F GK+++ AGD RQ+PPVV +    +D   ASV SS  ++  ++ F    + R +DD  FS+ +  +G           + T E  L  ++ +     LD   DFV+P  +L +P  C  R ++STHN SV  +NA +L  +  +     S   +D E +  + D  F     LN+++  G+P H+++LK   V M+ RNL+  D L NGTKV+VV   P  + V+
Sbjct:  919 FGGKIIIFAGDYRQIPPVVVDAKHNSDVFNASVKSSPIWQ-KLKTFSLVTSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVE-NLVNLSMISFVSKLDDLIDFVYPNVILTEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYS---ID-EVVSDNADQIFLGVDALNRMQPKGIPEHDLTLKVGCVCMVIRNLNFSDKLVNGTKVIVVNTSPRLITVR 1138          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZH9_ECTSI8.320e-12586.24ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A6H5KSD8_9PHAE1.270e-8868.35ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
D7FRZ0_ECTSI5.780e-8681.37ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
UPI001ED89BAA2.510e-2937.09ATP-dependent DNA helicase PIF1-like n=2 Tax=Ischn... [more]
UPI001ED8A18C8.370e-2936.62ATP-dependent DNA helicase PIF1-like n=1 Tax=Ischn... [more]
UPI00103A3A512.780e-2836.36uncharacterized protein LOC114364057 n=1 Tax=Ostri... [more]
UPI001ED8867E1.170e-2634.72uncharacterized protein LOC124173554 n=1 Tax=Ischn... [more]
A0A6H5GVM8_9HEMI2.600e-2536.15ATP-dependent DNA helicase (Fragment) n=1 Tax=Nesi... [more]
UPI001E68D7A09.630e-2533.19ATP-dependent DNA helicase PIF1-like n=1 Tax=Manio... [more]
UPI001E688A667.250e-2433.19uncharacterized protein LOC123868181 n=2 Tax=Manio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 2..209
e-value: 7.9E-31
score: 107.5
NoneNo IPR availablePANTHERPTHR23274:SF11ATP-DEPENDENT DNA HELICASE PIF1coord: 2..210
NoneNo IPR availablePANTHERPTHR23274DNA HELICASE-RELATEDcoord: 2..210
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12249contigE-fasciculatus_F_contig12249:2154..2807 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12249.1739.1mRNA_E-fasciculatus_F_contig12249.1739.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12249 2153..2807 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12249.1739.1 ID=prot_E-fasciculatus_F_contig12249.1739.1|Name=mRNA_E-fasciculatus_F_contig12249.1739.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=218bp
AFPGKVVVLAGDTRQLPPVVPNGGEADTTAASVLSSAFYRDNVEIFHSSK
TMRNKDDPGFSKMVDDIGDGISPTDEAGLTTITGVRTEQALDAATDFVFP
GDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHE
HLDPDVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLT
NGTKVVVVAIQPYTLQVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR010285DNA_helicase_pif1-like