mRNA_E-fasciculatus_F_contig12249.1739.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: D7FZH9_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH9_ECTSI) HSP 1 Score: 376 bits (965), Expect = 8.320e-125 Identity = 188/218 (86.24%), Postives = 205/218 (94.04%), Query Frame = 1
Query: 1 AFPGKVVVLAGDTRQLPPVVPNGGEADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDGISPTDEAGLTTITGVRTEQALDAATDFVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDPDVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVVVAIQPYTLQVQ 654
AFPGKVVVLAGDTRQLPPVVPNGGEA+TTAASVLSSA+YRDNVEIFH SKTMRNKDDP +SKMVDDIGDG+S DEAGL TITGVRTE+ALD A DFVFP DVLQ+PSACAKRG+ISTHNDSVARVNAAVLARV+GET TL+ RTMLDH+HLDPDVDDFFRMSQFLNQ+E+SGVPSH+I+L VVVMLCRNLSIDDCLTNGTKVVVVAIQP+TL++Q
Sbjct: 327 AFPGKVVVLAGDTRQLPPVVPNGGEAETTAASVLSSAYYRDNVEIFHLSKTMRNKDDPRYSKMVDDIGDGVSDIDEAGLITITGVRTEEALDVAIDFVFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARVNGETYTLQGRTMLDHKHLDPDVDDFFRMSQFLNQMEHSGVPSHDINLNVGVVVMLCRNLSIDDCLTNGTKVVVVAIQPFTLKLQ 544
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: A0A6H5KSD8_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD8_9PHAE) HSP 1 Score: 281 bits (718), Expect = 1.270e-88 Identity = 149/218 (68.35%), Postives = 170/218 (77.98%), Query Frame = 1
Query: 1 AFPGKVVVLAGDTRQLPPVVPNGGEADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDGISPTDEAGLTTITGVRTEQALDAATDFVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDPDVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVVVAIQPYTLQVQ 654
AFP KV V+AGDTRQLPPVV NGGE++TTAASVLSSAFYRDNV++FH + TMRNKDDP FSKMVD IGDG +P D GL T+TGV T +L++A DFVFP VLQ+P+ACAKRG+ISTHNDSVARVNAAVL+RV G+ TLR RTMLDHE +DPD SG+PSHEI LK VVV LCRN+SID LTNGTKVVV IQ YTL+V+
Sbjct: 282 AFPKKVFVIAGDTRQLPPVVANGGESETTAASVLSSAFYRDNVDVFHLNTTMRNKDDPDFSKMVDAIGDGEAPVDADGLVTMTGVDTALSLESAIDFVFPYYVLQNPTACAKRGIISTHNDSVARVNAAVLSRVQGDMFTLRGRTMLDHEQMDPD----------------SGIPSHEIKLKVGVVVRLCRNMSIDARLTNGTKVVVQEIQSYTLRVK 483
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: D7FRZ0_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRZ0_ECTSI) HSP 1 Score: 260 bits (665), Expect = 5.780e-86 Identity = 131/161 (81.37%), Postives = 143/161 (88.82%), Query Frame = 1
Query: 154 MRNKDDPGFSKMVDDIGDGISPTDEAGLTTITGVRTEQALDAATDFVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDPDVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVVVAIQP 636
MRNKDDP FSKMVDDIG+G+S DEAGLTTITGVRTEQALD DF FP DVLQ+PSACAKRG+ISTHNDSVARVNAAVLAR++GET TL+ RTMLDHEHLDPDVDDFFRMSQFLNQ+E S VPSH+I+LK VVV+LCRNLSIDDCLTNGTKVV+ P
Sbjct: 1 MRNKDDPRFSKMVDDIGNGVSDIDEAGLTTITGVRTEQALDVVIDFGFPDDVLQNPSACAKRGIISTHNDSVARVNAAVLARMNGETCTLQGRTMLDHEHLDPDVDDFFRMSQFLNQMEPSSVPSHDINLKVGVVVLLCRNLSIDDCLTNGTKVVLSRFNP 161
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: UPI001ED89BAA (ATP-dependent DNA helicase PIF1-like n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED89BAA) HSP 1 Score: 124 bits (311), Expect = 2.510e-29 Identity = 79/213 (37.09%), Postives = 117/213 (54.93%), Query Frame = 1
Query: 1 AFPGKVVVLAGDTRQLPPVVPNGGEADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDGISPTDEAG---LTTITGVRTEQALDAATDFVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDP---DVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVV 621
AF GKVVVLAGD RQ+PP++P+G +AD AS+ SS + ++ S +R++DD +S+ V +G+ PT G + + +L DFV+P DVL +P+ C R ++S N +++ +N VL + GE L S + P VD+ S LN + +SGVP H + LK V +L RN+S +D L NGTKV+V
Sbjct: 259 AFGGKVVVLAGDFRQIPPIIPDGSKADIIGASLKSSELWPIIIKKKLRS-ILRSRDDRAYSEFVLAVGEDRVPTVAMGEYQTIPLGSISFTTSLQELIDFVYPADVLSNPALCCNRAILSGTNHNISEINRFVLDMIPGEIVRLCSA-----DSTPPCAGAVDNTLIHSDVLNAISHSGVPDHILELKVGCVAILIRNISFEDRLVNGTKVIV 465
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: UPI001ED8A18C (ATP-dependent DNA helicase PIF1-like n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8A18C) HSP 1 Score: 122 bits (307), Expect = 8.370e-29 Identity = 78/213 (36.62%), Postives = 117/213 (54.93%), Query Frame = 1
Query: 1 AFPGKVVVLAGDTRQLPPVVPNGGEADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDGISPTDEAG---LTTITGVRTEQALDAATDFVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDP---DVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVV 621
AF GKVVVLAGD RQ+PP++P+G +AD AS+ SS + ++ S +R++DD +SK V +G+ PT G + + +L DFV+P DVL +P+ C R ++S N +++ +N VL + GE L S + P VD+ + LN + +SGVP H + LK V +L RN+S +D L NGTKV++
Sbjct: 259 AFGGKVVVLAGDFRQIPPIIPDGSKADIIDASLKSSVLWPIIIKKKLRS-ILRSRDDRAYSKFVLAVGEDRVPTVAMGEYQTIPLGSISFTTSLQELIDFVYPADVLCNPALCCNRAILSGTNHNISEINRFVLDMIPGEIVRLCSA-----DSTPPCAGAVDNTLIHTDVLNAISHSGVPDHILELKVGCVAILIRNISFEDRLVNGTKVII 465
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: UPI00103A3A51 (uncharacterized protein LOC114364057 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103A3A51) HSP 1 Score: 122 bits (305), Expect = 2.780e-28 Identity = 80/220 (36.36%), Postives = 117/220 (53.18%), Query Frame = 1
Query: 4 FPGKVVVLAGDTRQLPPVVPNG-GEADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDGISP--TDEAGLTTITGVRTEQALDAATD------FVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDPDVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVVVAIQP 636
F GK+V+ AGD RQ+PPVV +D SV SS + + ++IF+ S + RN+DDP +S + +G P T + + + V L TD FVF V+ +P CA R +++THN +V +N+ VL RV+ E S + E+ D+ F + LN+++ GVP H++ LK V M+ RNLS D L NGTKV+VV P
Sbjct: 755 FGGKIVIFAGDFRQIPPVVVRAKSNSDIINCSVKSSPIW-EQIKIFNLSTSQRNRDDPEYSDFLLKLGSNQLPVQTLKVNRSVLNLVDLTSHLSYVTDLNDLIDFVFSHVVIVEPDTCAGRAILTTHNQNVREINSIVLDRVESELLHFYSIDKVVSEN----TDEIFLGADALNKLQPKGVPEHDLKLKVGCVCMIIRNLSFSDRLVNGTKVIVVKTTP 969
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: UPI001ED8867E (uncharacterized protein LOC124173554 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8867E) HSP 1 Score: 117 bits (293), Expect = 1.170e-26 Identity = 75/216 (34.72%), Postives = 117/216 (54.17%), Query Frame = 1
Query: 1 AFPGKVVVLAGDTRQLPPVVPNGGEADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDGISPTDEAGLTTITGVR---TEQALDAATDFVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTML------DHEHLDPDVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVV 621
AF GKV+VLAGD RQ+PP++P+G + D AS+ SS + N+ +R+++D ++ V ++G+ P+ G+ +R +L+ +FV+P DVL +P C +R ++S N ++A +NAAVL + E L S D+ H+ DV LN V ++GVP H + LK +V+L RN+S D L NGTK+ V
Sbjct: 1218 AFGGKVMVLAGDFRQIPPIIPDGAKVDIIEASLKSSQLWP-NIIKKRLRTILRSREDQDYTDFVLEVGENKVPSISIGIYRPIPLRMIINATSLEDLMNFVYPRDVLFNPEQCVRRAILSGTNLNIAEINAAVLRMLPNEAVRLCSADSTPCAGPEDNVHIHTDV---------LNNVSHTGVPDHILELKVGCMVILIRNISFTDGLVNGTKLFV 1423
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: A0A6H5GVM8_9HEMI (ATP-dependent DNA helicase (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GVM8_9HEMI) HSP 1 Score: 113 bits (283), Expect = 2.600e-25 Identity = 77/213 (36.15%), Postives = 113/213 (53.05%), Query Frame = 1
Query: 4 FPGKVVVLAGDTRQLPPVVPNGGEADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDG-ISPTDEAGLTTIT--GVRTEQALDAATDFVFP--GDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDPDVDD--FFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVV 621
F GK++V AGD RQ+PP+VP+ D ASV SS F+ + + +F S R D FS+ + +G+G + P A T I ++T L+ DFV+P D +++P R V+S N ++ +N VL R G+ L S + DVDD F + +FL+ + + GVP H++ LK V + RNLS D L NGTKV+V
Sbjct: 1815 FGGKIIVFAGDFRQIPPIVPSNTPVDVVNASVKSSPFWAE-LNVFTLSTAQRTAGDELFSRFLLAVGEGRVEPVRVADETLIPLRNIQTVSNLNDLIDFVYPPNDDSIENPDLSRSRTVLSGTNAAIDDINRTVLDRCPGDVIHLYSA-----DRTTSDVDDPRFLPLPEFLHSLTHPGVPDHDLQLKIGSVCTVLRNLSFDCGLVNGTKVIV 2021
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: UPI001E68D7A0 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E68D7A0) HSP 1 Score: 109 bits (273), Expect = 9.630e-25 Identity = 75/226 (33.19%), Postives = 118/226 (52.21%), Query Frame = 1
Query: 4 FPGKVVVLAGDTRQLPPVVPNGGE-ADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDG--------ISPTDEAGLTTITGVRTEQALDAATDFVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDPDVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVVVAIQPYTLQVQ 654
F GK+++ AGD RQ+PPVV + +D ASV SS ++ ++ F + R +DD FS+ + +G + T E L ++ + LD DFV+P +L +P C R ++STHN SV +NA +L + + S +D E + + D F LN+++ G+P H+++LK V M+ RNL+ D L NGTKV+VV P + V+
Sbjct: 63 FGGKIIIFAGDYRQIPPVVVDAKHNSDVFNASVKSSPIWQ-KLKTFSLVTSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVE-NLVNLSMISFVSKLDDLIDFVYPNVILTEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYS---ID-EVVSDNADQIFLGVDALNRMQPKGIPEHDLTLKVGCVCMIIRNLNFSDKLVNGTKVIVVNTSPRLITVR 282
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Match: UPI001E688A66 (uncharacterized protein LOC123868181 n=2 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E688A66) HSP 1 Score: 109 bits (272), Expect = 7.250e-24 Identity = 75/226 (33.19%), Postives = 118/226 (52.21%), Query Frame = 1
Query: 4 FPGKVVVLAGDTRQLPPVVPNGGE-ADTTAASVLSSAFYRDNVEIFHSSKTMRNKDDPGFSKMVDDIGDG--------ISPTDEAGLTTITGVRTEQALDAATDFVFPGDVLQDPSACAKRGVISTHNDSVARVNAAVLARVDGETNTLRSRTMLDHEHLDPDVDDFFRMSQFLNQVEYSGVPSHEISLKERVVVMLCRNLSIDDCLTNGTKVVVVAIQPYTLQVQ 654
F GK+++ AGD RQ+PPVV + +D ASV SS ++ ++ F + R +DD FS+ + +G + T E L ++ + LD DFV+P +L +P C R ++STHN SV +NA +L + + S +D E + + D F LN+++ G+P H+++LK V M+ RNL+ D L NGTKV+VV P + V+
Sbjct: 919 FGGKIIIFAGDYRQIPPVVVDAKHNSDVFNASVKSSPIWQ-KLKTFSLVTSQRCRDDSEFSEFLLKLGSNQLTSVTLHTNRTVE-NLVNLSMISFVSKLDDLIDFVYPNVILTEPDVCVHRAILSTHNASVYEINAKILELLPEDPLHFYS---ID-EVVSDNADQIFLGVDALNRMQPKGIPEHDLTLKVGCVCMVIRNLNFSDKLVNGTKVIVVNTSPRLITVR 1138 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12249.1739.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12249.1739.1 >prot_E-fasciculatus_F_contig12249.1739.1 ID=prot_E-fasciculatus_F_contig12249.1739.1|Name=mRNA_E-fasciculatus_F_contig12249.1739.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=218bp AFPGKVVVLAGDTRQLPPVVPNGGEADTTAASVLSSAFYRDNVEIFHSSKback to top mRNA from alignment at E-fasciculatus_F_contig12249:2153..2807- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12249.1739.1 ID=mRNA_E-fasciculatus_F_contig12249.1739.1|Name=mRNA_E-fasciculatus_F_contig12249.1739.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=655bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12249:2153..2807- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12249:2153..2807- >mRNA_E-fasciculatus_F_contig12249.1739.1 ID=mRNA_E-fasciculatus_F_contig12249.1739.1|Name=mRNA_E-fasciculatus_F_contig12249.1739.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1308bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12249:2153..2807- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |