prot_E-fasciculatus_F_contig1224.1733.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1224.1733.1
Unique Nameprot_E-fasciculatus_F_contig1224.1733.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length202
Homology
BLAST of mRNA_E-fasciculatus_F_contig1224.1733.1 vs. uniprot
Match: A0A6H5K275_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K275_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 7.210e-86
Identity = 178/204 (87.25%), Postives = 181/204 (88.73%), Query Frame = 0
Query:    1 MKSAFAMIGALCCGASSAGAFVLPVGRPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---NVQQAIDSNDDYVSAMAQHQDKLVVIKFYDQFCRACDEIRPRYEDLSRSHPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKFAAVVSSKKGSGQAAVEFVAE 201
            MKSAFAMIGALCCGASSAGAF+LPVGRPS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              NVQ AIDSNDDYVSAMAQH+DKLVVIKFYDQFCRACDEIRPRYEDLSRS PEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEK AAV+SSKK S Q AVE VAE
Sbjct:    1 MKSAFAMIGALCCGASSAGAFILPVGRPSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARPTAAQEPERRPNVQ-AIDSNDDYVSAMAQHEDKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKIAAVISSKKSSRQDAVEAVAE 203          
BLAST of mRNA_E-fasciculatus_F_contig1224.1733.1 vs. uniprot
Match: A0A835YVS6_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS6_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.870e-24
Identity = 48/101 (47.52%), Postives = 67/101 (66.34%), Query Frame = 0
Query:   86 YVSAMAQHQDKLVVIKFYDQFCRACDEIRPRYEDLSRSHPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKFAAVVS 186
            ++ AMA + DK VV+KFYD FCRAC  + P++E +++ +P     F+ VEF   K LCK LGI  LPT+QIY G+ G++AD+P GP RF   E   A V++
Sbjct:   30 FLEAMAANGDKPVVLKFYDTFCRACKAVAPKFERMAQENPG--VAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMPVGPKRFHVAEATLAEVLN 128          
BLAST of mRNA_E-fasciculatus_F_contig1224.1733.1 vs. uniprot
Match: A0A7S4A7N2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7N2_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.890e-20
Identity = 49/104 (47.12%), Postives = 68/104 (65.38%), Query Frame = 0
Query:   79 AIDSNDDYVSAMAQHQ-DKLVVIKFYDQFCRACDEIRPRYEDLSRSHPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKF 181
            AI   D +++AM++   DK+V IKFY  +CRAC  I PR+E L++   EE A F+++EFS  KDLC++L I +LP VQ + G  G VA +  GPS+F DV  K 
Sbjct:  114 AIVDEDTFLAAMSKSAGDKVVAIKFYAGWCRACKTIAPRFERLAKEFGEE-AAFYEIEFSANKDLCRRLDIKKLPCVQFFRGAEGHVATVMCGPSKFPDVRLKL 216          
BLAST of mRNA_E-fasciculatus_F_contig1224.1733.1 vs. uniprot
Match: F0YB20_AURAN (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB20_AURAN)

HSP 1 Score: 80.5 bits (197), Expect = 2.380e-16
Identity = 38/95 (40.00%), Postives = 62/95 (65.26%), Query Frame = 0
Query:   80 IDSNDDYVSAMAQ-HQDKLVVIKFYDQFCRACDEIRPRYEDLSRSHPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSR 173
            ID ++ +++AM     D+LV +KFY  +CRAC  I PR+E L++    ++  FF++EF+  K+LC++L I +LP VQ + G+ G V  +  GPS+
Sbjct:    4 IDGDEAFLAAMQYCTDDRLVAVKFYASWCRACKSIAPRFERLAKEFAGDEVQFFEIEFAANKELCRRLNIKKLPCVQYFRGSLGCVDTVMCGPSK 98          
BLAST of mRNA_E-fasciculatus_F_contig1224.1733.1 vs. uniprot
Match: K0SW29_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SW29_THAOC)

HSP 1 Score: 81.6 bits (200), Expect = 1.570e-14
Identity = 41/121 (33.88%), Postives = 68/121 (56.20%), Query Frame = 0
Query:   80 IDSNDDYVSAMAQHQDKLVVIKFYDQFCRACDEIRPRYEDLSRS--HPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKFAAVVSSKKGSGQAAVEF 198
            I + + + + +  + DK++VIKF+  +CRAC  + P+Y  +SR   +     +F  +     K   K LGIM LP+VQIY G+ G V + P GPS+   ++ K   V++SK   GQ +++ 
Sbjct:   93 IQTPEQHTAWLDANSDKIMVIKFFAPWCRACKSVEPKYVQISRDPKYANIPIIFGQLSVQNNKSYVKSLGIMALPSVQIYAGSEGLVENFPCGPSKIPLLKRKLTEVINSKVDPGQLSLKI 213          
BLAST of mRNA_E-fasciculatus_F_contig1224.1733.1 vs. uniprot
Match: A0A7S3VCG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VCG8_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.870e-14
Identity = 37/111 (33.33%), Postives = 69/111 (62.16%), Query Frame = 0
Query:   80 IDSNDDYVSAMAQHQDKLVVIKFYDQFCRACDEIRPRYEDLSRS--HPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKFAAVVSSK 188
            ++S +++ + + Q+QDK++++KFY  +CRAC  + P++  +S+   + +   VF  +  + AK+  K LG++ LP+V IY G  G +   P GPS+   +++K A VV+ K
Sbjct:  119 LESKEEHQALLEQNQDKIILLKFYAPWCRACKGLEPKFIQISKDKKYAKLPLVFAQLSVANAKEYVKALGVLALPSVHIYGGEEGLLESFPCGPSKVPILKKKIAQVVNMK 229          
BLAST of mRNA_E-fasciculatus_F_contig1224.1733.1 vs. uniprot
Match: A0A7S3ATR9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ATR9_9EUKA)

HSP 1 Score: 72.8 bits (177), Expect = 1.690e-12
Identity = 37/104 (35.58%), Postives = 60/104 (57.69%), Query Frame = 0
Query:   80 IDSNDDYVSAM--AQHQDKLVVIKFYDQFCRACDEIRPRYEDLSRSHPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKF 181
            ID  D Y + +  A  ++++VVIKF+  +CRAC  + P++  ++   P  D  F ++ F   K LCK LGI  LP ++I  G+ G+V     GPS+ + ++EK 
Sbjct:   58 IDDTDAYEALIEEATRENRVVVIKFFASWCRACKAMSPKFTRIADDWP--DVEFHEIMFDNNKKLCKSLGIKILPYIEIIGGSGGKVEGFTCGPSKISRLQEKL 159          
BLAST of mRNA_E-fasciculatus_F_contig1224.1733.1 vs. uniprot
Match: A0A7S2UII6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UII6_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.640e-12
Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 0
Query:   95 DKLVVIKFYDQFCRACDEIRPRYEDLSRSHPEE----DAV-------FFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKF 181
            D+L V+KF+  +C++C +   RY+ L+    ++     AV       F +VEF+   DLCK LG+ +LP + IY G+ GRVAD   GP  F  V EK 
Sbjct:    3 DRLCVVKFHASWCKSCQKFGIRYKKLALQEGDKIDRRGAVLEKGRVRFAEVEFTANADLCKTLGVHKLPYIHIYSGSKGRVADFACGPKNFPLVIEKM 100          
BLAST of mRNA_E-fasciculatus_F_contig1224.1733.1 vs. uniprot
Match: B8CB63_THAPS (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB63_THAPS)

HSP 1 Score: 68.2 bits (165), Expect = 9.580e-12
Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = 0
Query:   95 DKLVVIKFYDQFCRACDEIRPRYEDLSRS--HPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRF 174
            DKL+VIKFY  +CRAC  + P+Y  +S+   +     VF  +     K   K LGI+ LP++QIY G+ G V + P GPS+ 
Sbjct:    1 DKLMVIKFYAPWCRACKAVEPKYVQISKDPQYSSIPIVFGQLSVQHNKAYVKSLGILALPSMQIYAGSEGLVENFPCGPSKI 82          
BLAST of mRNA_E-fasciculatus_F_contig1224.1733.1 vs. uniprot
Match: A0A7S3WN14_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WN14_EMIHU)

HSP 1 Score: 69.7 bits (169), Expect = 3.560e-11
Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 0
Query:   89 AMAQHQDKLVVIKFYDQFCRACDEIRPRYEDLSRSHPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKF 181
            A A+ + ++V IKFY  +CRAC  + P+Y+ ++   PE +  F +V F   K LCK LGI  LP +++  G+ G+V     GPS+ + + EK 
Sbjct:   96 AQAESESRVVCIKFYASWCRACKAMAPKYKRVADDWPEIE--FCEVLFDTNKALCKGLGIKVLPYIEVVAGSAGKVEGFSCGPSKISSLMEKL 186          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1224.1733.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K275_9PHAE7.210e-8687.25Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A835YVS6_9STRA1.870e-2447.52Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7S4A7N2_9STRA2.890e-2047.12Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
F0YB20_AURAN2.380e-1640.00Thioredoxin domain-containing protein (Fragment) n... [more]
K0SW29_THAOC1.570e-1433.88Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3VCG8_9STRA2.870e-1433.33Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7S3ATR9_9EUKA1.690e-1235.58Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2UII6_9STRA3.640e-1238.78Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B8CB63_THAPS9.580e-1241.46Thioredoxin domain-containing protein (Fragment) n... [more]
A0A7S3WN14_EMIHU3.560e-1137.63Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 65..196
e-value: 3.8E-16
score: 60.9
NoneNo IPR availablePANTHERPTHR43601FAMILY NOT NAMEDcoord: 38..185
NoneNo IPR availablePANTHERPTHR43601:SF10THIOREDOXIN-LIKE 2-2, CHLOROPLASTICcoord: 38..185
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..201
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.588
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 83..161
e-value: 5.6E-12
score: 45.6
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 57..186
score: 10.576
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 80..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1224contigE-fasciculatus_F_contig1224:11550..14733 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1224.1733.1mRNA_E-fasciculatus_F_contig1224.1733.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1224 10766..14733 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1224.1733.1 ID=prot_E-fasciculatus_F_contig1224.1733.1|Name=mRNA_E-fasciculatus_F_contig1224.1733.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=202bp
MKSAFAMIGALCCGASSAGAFVLPVGRPSSSSSSSLAARRQFTRRTPGGA
SMMMSSVAEPAAAPTAAQEPERRRNVQQAIDSNDDYVSAMAQHQDKLVVI
KFYDQFCRACDEIRPRYEDLSRSHPEEDAVFFDVEFSGAKDLCKQLGIMR
LPTVQIYDGTNGRVADLPAGPSRFTDVEEKFAAVVSSKKGSGQAAVEFVA
E*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR013766Thioredoxin_domain