prot_E-fasciculatus_F_contig12220.1725.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12220.1725.1
Unique Nameprot_E-fasciculatus_F_contig12220.1725.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length66
Homology
BLAST of mRNA_E-fasciculatus_F_contig12220.1725.1 vs. uniprot
Match: D7FRN0_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRN0_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 2.640e-40
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
Query:    1 SILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPAA 65
            SILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPAA
Sbjct:   97 SILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPAA 161          
BLAST of mRNA_E-fasciculatus_F_contig12220.1725.1 vs. uniprot
Match: A0A835YNI1_9STRA (Ubiquitin conjugating enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNI1_9STRA)

HSP 1 Score: 104 bits (259), Expect = 5.980e-27
Identity = 48/63 (76.19%), Postives = 56/63 (88.89%), Query Frame = 0
Query:    1 SILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPP 63
            SILNE  GWRP+ITIKQML GI +LLDNPNP+ PAQSEAYQ+FVNN+AEY+RRV +EA+KN P
Sbjct:   96 SILNEDDGWRPAITIKQMLLGIQDLLDNPNPNSPAQSEAYQMFVNNRAEYNRRVRLEARKNIP 158          
BLAST of mRNA_E-fasciculatus_F_contig12220.1725.1 vs. uniprot
Match: A0A6U0IJL9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IJL9_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.340e-25
Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 0
Query:    1 SILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPA 64
            SILNE +GWRP+ITIKQML GI +LLD+PNP+ PAQSEAYQLF+NNK EY RRV  EA+KN P+
Sbjct:   96 SILNEEEGWRPAITIKQMLLGIQDLLDDPNPNSPAQSEAYQLFMNNKPEYKRRVKAEARKNAPS 159          
BLAST of mRNA_E-fasciculatus_F_contig12220.1725.1 vs. uniprot
Match: B8BY49_THAPS (Ubiquitin conjugating enzyme n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8BY49_THAPS)

HSP 1 Score: 100 bits (250), Expect = 1.380e-25
Identity = 46/64 (71.88%), Postives = 54/64 (84.38%), Query Frame = 0
Query:    1 SILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPA 64
            SILNE +GWRP+IT+KQML GI +LLD PNP+ PAQSEAY LF+NNKAEY RRV  EA+KN P+
Sbjct:   97 SILNEEEGWRPAITVKQMLLGIQDLLDTPNPNSPAQSEAYNLFINNKAEYKRRVKAEARKNTPS 160          
BLAST of mRNA_E-fasciculatus_F_contig12220.1725.1 vs. uniprot
Match: A0A7S4RZR8_9STRA (Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S4RZR8_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 8.290e-25
Identity = 45/63 (71.43%), Postives = 53/63 (84.13%), Query Frame = 0
Query:    1 SILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPP 63
            SILNE +GWRP+IT+KQ+L GI +LLD PNP+ PAQSEAY LF+NNKAEY RRV  EA+KN P
Sbjct:   99 SILNEEEGWRPAITVKQILLGIQDLLDEPNPNSPAQSEAYNLFINNKAEYKRRVKAEARKNTP 161          
BLAST of mRNA_E-fasciculatus_F_contig12220.1725.1 vs. uniprot
Match: B7G0L5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0L5_PHATC)

HSP 1 Score: 98.2 bits (243), Expect = 1.540e-24
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    1 SILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPP 63
            SILNE +GWRP+ITIKQ+L GI +LLD+PNPD PAQSEA  LF++NKAEY RRV IEA+KN P
Sbjct:   96 SILNEEEGWRPAITIKQVLTGIQDLLDDPNPDSPAQSEAINLFLSNKAEYKRRVKIEARKNQP 158          
BLAST of mRNA_E-fasciculatus_F_contig12220.1725.1 vs. uniprot
Match: A0A7S1FY89_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY89_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.800e-24
Identity = 44/65 (67.69%), Postives = 55/65 (84.62%), Query Frame = 0
Query:    1 SILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPAA 65
            SILNE +GWRP+IT+KQM+ GI +LLD+PNP+ PAQSEAY L++ NKAEY RRV +EAK+N P A
Sbjct:  102 SILNEEEGWRPAITLKQMVLGIQDLLDDPNPNSPAQSEAYNLYMRNKAEYSRRVRVEAKRNAPPA 166          
BLAST of mRNA_E-fasciculatus_F_contig12220.1725.1 vs. uniprot
Match: A0A7S4HWQ1_9STRA (Hypothetical protein n=3 Tax=Eupodiscales TaxID=33838 RepID=A0A7S4HWQ1_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.080e-24
Identity = 45/65 (69.23%), Postives = 56/65 (86.15%), Query Frame = 0
Query:    1 SILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPAA 65
            SILNE +GWRP+ITIKQML GI +LLD+PNP+ PAQSEAY L++NN++EY RRV  EA+KN PA+
Sbjct:  135 SILNEEEGWRPAITIKQMLLGIQDLLDDPNPNSPAQSEAYNLYMNNRSEYKRRVKAEARKNTPAS 199          
BLAST of mRNA_E-fasciculatus_F_contig12220.1725.1 vs. uniprot
Match: A0A448ZL65_9STRA (UBC core domain-containing protein n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A448ZL65_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.930e-24
Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    1 SILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPP 63
            SILNE +GWRP+IT+KQ+L GI +LLD+PNP+ PAQSEAYQLF++NK EY RRV  EA+KN P
Sbjct:   96 SILNEEEGWRPAITLKQVLIGIQDLLDDPNPNSPAQSEAYQLFIHNKTEYKRRVQAEARKNTP 158          
BLAST of mRNA_E-fasciculatus_F_contig12220.1725.1 vs. uniprot
Match: A0A7S2PI22_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PI22_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.440e-24
Identity = 44/65 (67.69%), Postives = 55/65 (84.62%), Query Frame = 0
Query:    1 SILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPAA 65
            SILNE +GWRP+ITIKQML GI +LLD+PNP+ PAQSEAY LF +NK+EY +RV  EA+KN P++
Sbjct:   60 SILNEEEGWRPAITIKQMLLGIQDLLDDPNPNSPAQSEAYNLFTSNKSEYRKRVKAEARKNTPSS 124          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12220.1725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRN0_ECTSI2.640e-40100.00UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YNI1_9STRA5.980e-2776.19Ubiquitin conjugating enzyme n=1 Tax=Tribonema min... [more]
A0A6U0IJL9_9STRA1.340e-2573.44Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
B8BY49_THAPS1.380e-2571.88Ubiquitin conjugating enzyme n=2 Tax=Thalassiosira... [more]
A0A7S4RZR8_9STRA8.290e-2571.43Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID... [more]
B7G0L5_PHATC1.540e-2473.02Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1FY89_9STRA1.800e-2467.69Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S4HWQ1_9STRA2.080e-2469.23Hypothetical protein n=3 Tax=Eupodiscales TaxID=33... [more]
A0A448ZL65_9STRA2.930e-2469.84UBC core domain-containing protein n=2 Tax=Bacilla... [more]
A0A7S2PI22_9STRA3.440e-2467.69Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..64
e-value: 5.0E-16
score: 60.7
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 1..60
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 1..54
e-value: 2.6E-11
score: 43.3
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 1..52
score: 13.128
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 1..62
NoneNo IPR availablePANTHERPTHR24067:SF275coord: 1..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12220contigE-fasciculatus_F_contig12220:19..863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12220.1725.1mRNA_E-fasciculatus_F_contig12220.1725.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12220 19..863 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12220.1725.1 ID=prot_E-fasciculatus_F_contig12220.1725.1|Name=mRNA_E-fasciculatus_F_contig12220.1725.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=66bp
SILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEY
DRRVLIEAKKNPPAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD