mRNA_E-fasciculatus_F_contig1222.1723.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1222.1723.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE) HSP 1 Score: 395 bits (1014), Expect = 9.840e-138 Identity = 197/228 (86.40%), Postives = 207/228 (90.79%), Query Frame = 1
Query: 1 MKTSFCAAAGLVMAAGLMPSTAQASGVVTAQQQITLLNPEDFAFTLGGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEMLFVIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASLNFEEPALQKLIESLPEAPAAARQQCLQRCGMAEPGKDFSYDYIYD 684
MKTSFCAAAG V+AAGLM S Q GVVT QQQITL NPEDF F+LGGPEPD LVDGFQ+R VNQLPALDGQGISM LVNLDPCAINLPHIHPRATEM++VIKGEQ+RVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNN+DPGA+TITTRFFELP EAIQAS+NFEEP LQ LIESLP+APAAARQQCLQRC MAEPG FSYDY YD
Sbjct: 1 MKTSFCAAAGFVIAAGLM-SAVQVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRMAEPGNHFSYDYTYD 227
BLAST of mRNA_E-fasciculatus_F_contig1222.1723.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI) HSP 1 Score: 379 bits (973), Expect = 1.350e-131 Identity = 186/227 (81.94%), Postives = 204/227 (89.87%), Query Frame = 1
Query: 1 MKTSFCAAAGLVMAAGLMPSTAQASGVVTAQQQITLLNPEDFAFTLGGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEMLFVIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASLNFEEPALQKLIESLPEAPAAARQQCLQRCGMAEPGKDFSYDYIY 681
MKTSFC+AAGLV+AAG M STAQASGVVTAQQQIT+ NPEDF FTLGGPEPD VDGFQIR + Q+PALDGQGI+MALVNLD C INLPHIHPRATEM +VI GE +RVAFVEENGGEGAVVNDL+QGDV FFPQGLIHY+QNL CEP TFLAALNNDDPGAVTITTRFFELP+EAIQASLNFE+PALQ+LIESLP+APAAAR+QCL+RCG+A+ G FSY Y Y
Sbjct: 1 MKTSFCSAAGLVVAAGFMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGLADGGDGFSYSYGY 227
BLAST of mRNA_E-fasciculatus_F_contig1222.1723.1 vs. uniprot
Match: D7FI68_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI68_ECTSI) HSP 1 Score: 181 bits (458), Expect = 1.270e-54 Identity = 91/100 (91.00%), Postives = 94/100 (94.00%), Query Frame = 1
Query: 1 MKTSFCAAAGLVMAAGLMPSTAQASGVVTAQQQITLLNPEDFAFTLGGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEM 300
MKT FCAAAG V+AAGLMPST QASGVVTAQQQITL NPEDF F+LGGPEPD LVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE+
Sbjct: 1 MKT-FCAAAGFVIAAGLMPSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEV 99
BLAST of mRNA_E-fasciculatus_F_contig1222.1723.1 vs. uniprot
Match: D7FIJ3_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ3_ECTSI) HSP 1 Score: 177 bits (449), Expect = 1.160e-53 Identity = 90/99 (90.91%), Postives = 92/99 (92.93%), Query Frame = 1
Query: 1 MKTSFCAAAGLVMAAGLMPSTAQASGVVTAQQQITLLNPEDFAFTLGGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE 297
MKT FCAAAG V+AAGLM ST QASGVVTAQQQITL NPEDF F+LGGPEPD LVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE
Sbjct: 1 MKT-FCAAAGFVIAAGLMSSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE 98
BLAST of mRNA_E-fasciculatus_F_contig1222.1723.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG) HSP 1 Score: 168 bits (425), Expect = 3.690e-48 Identity = 90/192 (46.88%), Postives = 122/192 (63.54%), Query Frame = 1
Query: 85 TAQQQITLLNPEDFAFTL-GGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEMLFVIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASLNFE-EPALQKLIESLPEAPAAARQQCLQRCGMAEPG 654
T Q++ N EDF L P+ + G + +N+ +PAL QG++M L+NL+PC NLPH+HPRA+E ++VI+G V+V F+EENG + +VNDL QG F PQG IHYQ NL CE A +AA NN+DPG +TI +FF+LP AI ASL +P ++ L SLP PA ++CL+RCG G
Sbjct: 37 TEVQRMKQFNHEDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQGN-VQVGFIEENGAK-VIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFFKLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRCGFGAYG 226
BLAST of mRNA_E-fasciculatus_F_contig1222.1723.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC) HSP 1 Score: 159 bits (402), Expect = 6.850e-44 Identity = 83/175 (47.43%), Postives = 110/175 (62.86%), Query Frame = 1
Query: 124 FAFTLGGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEMLFVIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASLNFEEPALQKLIESLPEAPAAA--RQQCLQRCGM 642
F F E DT G + +V+Q PAL G G+S LV+L PC+IN PH+HPRATE++++IKG +V V F EENGG V ND+ +GD AFFP LIH+Q N CEPA F+A LN+DD G TI FF LP + + +L +E + L E LP PA R++C ++CG+
Sbjct: 147 FDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKG-RVSVGFAEENGGR-IVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIAQAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319
BLAST of mRNA_E-fasciculatus_F_contig1222.1723.1 vs. uniprot
Match: A0A0G4EG82_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EG82_VITBC) HSP 1 Score: 146 bits (368), Expect = 1.220e-39 Identity = 78/176 (44.32%), Postives = 103/176 (58.52%), Query Frame = 1
Query: 121 DFAFTLGGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEMLFVIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASLNFEEPALQKLIESLPEAPAAA--RQQCLQRCGM 642
DF F + T +G IR Q PAL G G S + ++ PC+IN PH+HPRATEML++ KG + V F EENGG V ND+ +G+ AFFP LIH+Q N CEPA F+ LN+DD G TI F LP + + +LN +E + L + LP PA R QC ++CG+
Sbjct: 73 DFTFDFNEAQVLTNGEGGGIRGATPVQWPALSGHGFSQTVTDIAPCSINTPHLHPRATEMLYITKGRLI-VGFAEENGGR-IVTNDIKEGNSAFFPHTLIHWQFNPTCEPAQFVGTLNSDDGGVHTIAQALFGLPNDVLATALNVDEYDVTLLHDELPNVPALGLKRDQCRRKCGL 246
BLAST of mRNA_E-fasciculatus_F_contig1222.1723.1 vs. uniprot
Match: A0A0L0FR85_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FR85_9EUKA) HSP 1 Score: 147 bits (370), Expect = 1.830e-39 Identity = 74/178 (41.57%), Postives = 112/178 (62.92%), Query Frame = 1
Query: 118 EDFAFTLGGPEP---DTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEMLFVIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASLNFEEPALQKLIESLPEAPAAARQQCLQRCGM 642
EDF F D+L G I+ VN+ + P + G+S + ++ PC INLPH+HPRATE L++I+G QV + FV + ++NDL + V FFP+G +HYQQN++CE A F++ L+N+DPG + +++ LP EA+ A+ N ++ + +L LPE PA AR +CL RCG+
Sbjct: 108 EDFVFDFTDSNKVTVDSLGLGGNIQPVNLEEFPIMQLAGMSYSRFSIGPCGINLPHVHPRATESLYMIEG-QVTLGFVSTE--DRLIMNDLEKDQVTFFPKGHLHYQQNMNCENAEFISILDNEDPGVLVVSSALLSLPDEALTATFNEDQALIAQLRLGLPEGPARARSECLARCGL 282
BLAST of mRNA_E-fasciculatus_F_contig1222.1723.1 vs. uniprot
Match: A0A835YZF9_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF9_9STRA) HSP 1 Score: 142 bits (359), Expect = 5.640e-39 Identity = 79/182 (43.41%), Postives = 104/182 (57.14%), Query Frame = 1
Query: 121 DFAFTLGGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEMLFVIKG--EQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPT------EAIQASLNFEEPALQKLIESLPEAPAAARQQCLQRCGM 642
DF F L G G + ++ QLP+L G+ ++M + L+PC INLPH+HPRATE+L+V+ E V AFVEENGG + N + G+ AFFPQGL H Q N+ C PAT +AAL +DD G TITT E E + A+L + L LI P+ PA +C QRCG+
Sbjct: 9 DFKFDLAGSTATAGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEENGGR-TIENTVVAGEAAFFPQGLTHMQVNMGCTPATMIAALGSDDFGVQTITTTALEGLAGAEGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 189
BLAST of mRNA_E-fasciculatus_F_contig1222.1723.1 vs. uniprot
Match: A0A836CNU2_9STRA (RmlC-like cupin domain-containing protein n=7 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNU2_9STRA) HSP 1 Score: 144 bits (362), Expect = 8.630e-39 Identity = 79/182 (43.41%), Postives = 106/182 (58.24%), Query Frame = 1
Query: 121 DFAFTLGGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEMLFVIKG--EQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPT------EAIQASLNFEEPALQKLIESLPEAPAAARQQCLQRCGM 642
DF F L G + T G + ++ QLP+L G+ ++M + L+PC INLPH+HPRATE+L+V+ E V AFVEENGG + N + G+ AFFPQGL H Q N+ C PAT +AAL +DD G TITT + E + A+L + L LI P+ PA +C QRCG+
Sbjct: 60 DFKFDLDGSKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEENGGR-TIENTIVTGEAAFFPQGLTHVQVNMGCTPATMIAALGSDDFGVQTITTTALKGLAGADGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 240 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1222.1723.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1222.1723.1 >prot_E-fasciculatus_F_contig1222.1723.1 ID=prot_E-fasciculatus_F_contig1222.1723.1|Name=mRNA_E-fasciculatus_F_contig1222.1723.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=240bp MKTSFCAAAGLVMAAGLMPSTAQASGVVTAQQQITLLNPEDFAFTLGGPEback to top mRNA from alignment at E-fasciculatus_F_contig1222:6440..8439- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1222.1723.1 ID=mRNA_E-fasciculatus_F_contig1222.1723.1|Name=mRNA_E-fasciculatus_F_contig1222.1723.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2000bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1222:6440..8439- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1222:6440..8439- >mRNA_E-fasciculatus_F_contig1222.1723.1 ID=mRNA_E-fasciculatus_F_contig1222.1723.1|Name=mRNA_E-fasciculatus_F_contig1222.1723.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1440bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1222:6440..8439- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |