prot_E-fasciculatus_F_contig12213.1719.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12213.1719.1
Unique Nameprot_E-fasciculatus_F_contig12213.1719.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length66
Homology
BLAST of mRNA_E-fasciculatus_F_contig12213.1719.1 vs. uniprot
Match: D7G2M8_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2M8_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 1.940e-33
Identity = 62/65 (95.38%), Postives = 63/65 (96.92%), Query Frame = 0
Query:    1 LNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEPNFCKIFRDLDLMTVQFAALFCGASQLVNHVLHR 65
            LNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEP+FCKIFRDLDLMTVQFAAL  GASQLVNHVLHR
Sbjct:  919 LNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEPSFCKIFRDLDLMTVQFAALSGGASQLVNHVLHR 983          
BLAST of mRNA_E-fasciculatus_F_contig12213.1719.1 vs. uniprot
Match: A0A6H5JTE4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTE4_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 1.510e-31
Identity = 59/65 (90.77%), Postives = 61/65 (93.85%), Query Frame = 0
Query:    1 LNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEPNFCKIFRDLDLMTVQFAALFCGASQLVNHVLHR 65
            L+VLSFAAEVRAGLWRKNGQ MNDQVLNYAEP+FCKIFRDLDL  VQFAAL CGASQLVNHVLHR
Sbjct: 1071 LDVLSFAAEVRAGLWRKNGQSMNDQVLNYAEPSFCKIFRDLDLTAVQFAALSCGASQLVNHVLHR 1135          
BLAST of mRNA_E-fasciculatus_F_contig12213.1719.1 vs. uniprot
Match: A0A7S1FYU0_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FYU0_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 3.230e-17
Identity = 40/67 (59.70%), Postives = 49/67 (73.13%), Query Frame = 0
Query:    4 LSFAAEVRAGLWRKNGQCMNDQVLNYAEPNFCKIFRDLDLMTVQFAALF-----CGASQLVNHVLHR 65
            LS AA++RAGLW++NG CM DQ +NYAEP FCK+FRD DL  VQFAAL        A+ L+N +LHR
Sbjct:  506 LSRAAQIRAGLWKRNGHCMYDQCMNYAEPPFCKMFRDADLFLVQFAALGYSHGESSAAYLINLLLHR 572          
BLAST of mRNA_E-fasciculatus_F_contig12213.1719.1 vs. uniprot
Match: K8YRX5_NANGC (E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRX5_NANGC)

HSP 1 Score: 80.9 bits (198), Expect = 2.830e-16
Identity = 37/65 (56.92%), Postives = 49/65 (75.38%), Query Frame = 0
Query:    1 LNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEPNFCKIFRDLDLMTVQFAALFCGASQLVNHVLHR 65
            ++VL  +AE+RAGLWR+NGQ M DQV+NY EP FC++FRD+DL+ VQ AAL  G  + V + L R
Sbjct:   38 VSVLVLSAEIRAGLWRRNGQLMMDQVINYREPPFCRVFRDMDLLLVQMAALAWGDWEKVMNALLR 102          
BLAST of mRNA_E-fasciculatus_F_contig12213.1719.1 vs. uniprot
Match: W7U0V5_9STRA (E3 ubiquitin-protein ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0V5_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.870e-16
Identity = 37/65 (56.92%), Postives = 49/65 (75.38%), Query Frame = 0
Query:    1 LNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEPNFCKIFRDLDLMTVQFAALFCGASQLVNHVLHR 65
            ++VL  +AE+RAGLWR+NGQ M DQV+NY EP FC++FRD+DL+ VQ AAL  G  + V + L R
Sbjct:  988 VSVLVLSAEIRAGLWRRNGQLMMDQVINYREPPFCRVFRDMDLLLVQMAALAWGDWEKVMNALLR 1052          
BLAST of mRNA_E-fasciculatus_F_contig12213.1719.1 vs. uniprot
Match: A0A7S1YB19_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YB19_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.860e-15
Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    3 VLSFAAEVRAGLWRKNGQCMNDQVLNYAEPNFCKIFRDLDLMTVQFAALFCGASQLVNHVLHR 65
            V+S  A+VRA LW++NG  M+DQVLNY+EP FC+  RD D++ +QF+AL  GA+ LVN +LHR
Sbjct:   19 VMSRVAQVRADLWKRNGPKMDDQVLNYSEPPFCRSLRDADVLLLQFSALGRGAAVLVNLLLHR 81          
BLAST of mRNA_E-fasciculatus_F_contig12213.1719.1 vs. uniprot
Match: A0A7S1XZF4_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZF4_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.440e-15
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    1 LNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEPNFCKIFRDLDLMTVQFAALFCGASQLVNHVLHR 65
            L V+  AA+V +G+WR+NG  + DQV NY E  F +IFRDLD++ VQFAAL  G    V+HV+HR
Sbjct:  399 LRVIVMAAQVSSGMWRRNGTVIQDQVNNYGEGPFYRIFRDLDIIAVQFAALLYGPDAFVSHVVHR 463          
BLAST of mRNA_E-fasciculatus_F_contig12213.1719.1 vs. uniprot
Match: A0A7S2B4T4_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B4T4_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 5.610e-15
Identity = 31/51 (60.78%), Postives = 42/51 (82.35%), Query Frame = 0
Query:    1 LNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEPNFCKIFRDLDLMTVQFAAL 51
            L+VL  AAEVR G+W++NG  M DQV+NY+EP FCK+FRDLDL+ +Q+A +
Sbjct:   84 LSVLVLAAEVRIGMWKRNGHAMQDQVMNYSEPPFCKMFRDLDLLMLQWAGV 134          
BLAST of mRNA_E-fasciculatus_F_contig12213.1719.1 vs. uniprot
Match: A0A7S3KZJ0_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KZJ0_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.650e-14
Identity = 38/60 (63.33%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    1 LNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEPNFCKIFRDLDLMTVQFAALFCGASQLVN 60
            L VL+ AA+VRAGLWR+NG  +NDQVLNYAEP FC+  RD DL+ VQFA L  G  Q +N
Sbjct:  928 LLVLTRAAQVRAGLWRRNGPGLNDQVLNYAEPPFCRTMRDADLLLVQFAVL--GRKQGLN 985          
BLAST of mRNA_E-fasciculatus_F_contig12213.1719.1 vs. uniprot
Match: A0A7R9U7G2_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7G2_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.250e-14
Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    1 LNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEPNFCKIFRDLDLMTVQFAALFCGASQLVNHVLHR 65
            L V+  A+++ +G+WR+NG  + DQV NY E  F KIFRDLD++ +QFAAL  G    V+HV+HR
Sbjct:  674 LRVVVMASQISSGMWRRNGMSIQDQVNNYGEGLFFKIFRDLDVIALQFAALLYGPDAFVSHVVHR 738          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12213.1719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2M8_ECTSI1.940e-3395.38E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A6H5JTE4_9PHAE1.510e-3190.77E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
A0A7S1FYU0_9STRA3.230e-1759.70E3 ubiquitin-protein ligase n=1 Tax=Corethron hyst... [more]
K8YRX5_NANGC2.830e-1656.92E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Nan... [more]
W7U0V5_9STRA2.870e-1656.92E3 ubiquitin-protein ligase n=2 Tax=Monodopsidacea... [more]
A0A7S1YB19_9STRA1.860e-1557.14E3 ubiquitin-protein ligase n=1 Tax=Grammatophora ... [more]
A0A7S1XZF4_9STRA3.440e-1553.85E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pha... [more]
A0A7S2B4T4_9STRA5.610e-1560.78E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dic... [more]
A0A7S3KZJ0_9STRA1.650e-1463.33E3 ubiquitin-protein ligase n=1 Tax=Amphora coffei... [more]
A0A7R9U7G2_9STRA2.250e-1450.77E3 ubiquitin-protein ligase n=1 Tax=Pinguiococcus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 1..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12213contigE-fasciculatus_F_contig12213:266..1067 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12213.1719.1mRNA_E-fasciculatus_F_contig12213.1719.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12213 266..1067 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12213.1719.1 ID=prot_E-fasciculatus_F_contig12213.1719.1|Name=mRNA_E-fasciculatus_F_contig12213.1719.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=66bp
LNVLSFAAEVRAGLWRKNGQCMNDQVLNYAEPNFCKIFRDLDLMTVQFAA
LFCGASQLVNHVLHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039164UBR1-like