prot_E-fasciculatus_F_contig12202.1714.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12202.1714.1
Unique Nameprot_E-fasciculatus_F_contig12202.1714.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length234
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12202.1714.1 vs. uniprot
Match: D7FKT9_ECTSI (Tim44 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT9_ECTSI)

HSP 1 Score: 417 bits (1073), Expect = 1.220e-146
Identity = 211/233 (90.56%), Postives = 218/233 (93.56%), Query Frame = 0 
Query:    1 SSRLGEVRSSGGIFDPYVYRGTGGQGLAPMMSSEGVKERLGIMRSHLKSGVCAGIIQKHVPDFHASKFPPVANQIFKDFFEAHRKGDARALAGLTTEELYASLKGEIKSSKSRGANRAAFRLVDFKEPTRVLQMRVDRKKHISPKEGWGQASFWAAVTCRLCSERQLLVVDAKGNEVKAKADEDPTTAQNVTIGVFEAFFGDSAGRWRLALVKELAESPAGATRATGETKKSP 233
            SSRLGEVRSSGGIFDPYVYRG GG+GL PMMSSEGV+ERLGIMRSHLKSGVCAGIIQKHVPDFH SKFPPVANQIFKDFFEAHRKGD RALAGLTTEELYASLKGEIKSSKSRGA RAAFRLVDFKEPT VLQMRVDRKKHISPKEGWGQ      VTCRLCSERQLLVVDAKGNEV+AKADED TTAQNVT+GVFEAFFGDSAGRWRLALV+E AE+PAGAT ATG+TKKSP
Sbjct:   15 SSRLGEVRSSGGIFDPYVYRGAGGKGLPPMMSSEGVRERLGIMRSHLKSGVCAGIIQKHVPDFHVSKFPPVANQIFKDFFEAHRKGDTRALAGLTTEELYASLKGEIKSSKSRGAQRAAFRLVDFKEPTTVLQMRVDRKKHISPKEGWGQ------VTCRLCSERQLLVVDAKGNEVEAKADEDATTAQNVTVGVFEAFFGDSAGRWRLALVQEFAEAPAGATSATGKTKKSP 241
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BLAST of mRNA_E-fasciculatus_F_contig12202.1714.1 vs. uniprot
Match: A0A835YW25_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW25_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.570e-37
Identity = 78/206 (37.86%), Postives = 117/206 (56.80%), Query Frame = 0 
Query:   29 PMMSSEGVKERLGIMRSHLKSGVCAGIIQKHVPDFHASKFPPVANQIFKDFFEAHRKGDARALAGLTTEELYASLKGEI----KSSKSRGANRAAFRLVDFKEPTRVLQMRVDRKKHISPKEGWGQASFWAAVTCRLCSERQLLVVDAKGNEVKAKADEDPTTAQNVTIGVFEAFFGDSAGRWRLALVKEL-AESPAGATRATGET 229
            P+ +  G+K R  + + H+KS     II+KHVP F    FPP+A+Q+F+ F +AHRKGD  +L  L TE L+ ++K ++    +   S    RAAF+L+   EPT VLQ+R   +K    K GWGQ      +T +  + R++L VD +G EV+     +    +++T+GV E FF D A  WRLA++ E+ A  PA A     +T
Sbjct:    6 PVYTLAGLKHRFTVYKGHMKSSAAIAIIKKHVPGFSPKTFPPIADQVFQSFIDAHRKGDLPSLCNLATEGLHDNVKADVTRMGRKPGSEPKPRAAFKLLRMMEPTYVLQVRAAMEKGSGGKRGWGQ------MTVQYVTSREILAVDRRGREVQPPPGGNKVV-ESITMGVLEIFFNDPAHTWRLAMLHEVGATGPAEARTNVDKT 204
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BLAST of mRNA_E-fasciculatus_F_contig12202.1714.1 vs. uniprot
Match: A0A6H5K0Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Z7_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.160e-27
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0 
Query:    1 SSRLGEVRSSGGIFDPYVYRGTGGQGLAPMMSSEGVKERLGIMRSHLKSGVCAGIIQKH 59
            SSRLGEVRSSGG+FDPYVYRG GG+GL PMMSSEGVKERLGIMR HLKSGVCAGIIQ H
Sbjct:   21 SSRLGEVRSSGGVFDPYVYRGAGGKGLPPMMSSEGVKERLGIMRGHLKSGVCAGIIQVH 79
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12202.1714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FKT9_ECTSI1.220e-14690.56Tim44 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YW25_9STRA1.570e-3737.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K0Z7_9PHAE1.160e-2789.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007379Tim44-like domainPFAMPF04280Tim44coord: 57..210
e-value: 9.7E-8
score: 32.2
NoneNo IPR availableGENE3D3.10.450.240coord: 49..227
e-value: 9.6E-23
score: 82.5
NoneNo IPR availablePANTHERPTHR28554FAMILY NOT NAMEDcoord: 8..210
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 46..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12202contigE-fasciculatus_F_contig12202:572..3308 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12202.1714.1mRNA_E-fasciculatus_F_contig12202.1714.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12202 572..3308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12202.1714.1 ID=prot_E-fasciculatus_F_contig12202.1714.1|Name=mRNA_E-fasciculatus_F_contig12202.1714.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=234bp
SSRLGEVRSSGGIFDPYVYRGTGGQGLAPMMSSEGVKERLGIMRSHLKSG
VCAGIIQKHVPDFHASKFPPVANQIFKDFFEAHRKGDARALAGLTTEELY
ASLKGEIKSSKSRGANRAAFRLVDFKEPTRVLQMRVDRKKHISPKEGWGQ
ASFWAAVTCRLCSERQLLVVDAKGNEVKAKADEDPTTAQNVTIGVFEAFF
GDSAGRWRLALVKELAESPAGATRATGETKKSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032710NTF2-like_dom_sf
IPR007379Tim44-like_dom