prot_E-fasciculatus_F_contig1220.1711.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig1220.1711.1
Unique Name	prot_E-fasciculatus_F_contig1220.1711.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	702

Homology

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BLAST of mRNA_E-fasciculatus_F_contig1220.1711.1 vs. uniprot
Match: D8LM26_ECTSI (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM26_ECTSI)

HSP 1 Score: 942 bits (2435), Expect = 0.000e+0
Identity = 575/682 (84.31%), Postives = 580/682 (85.04%), Query Frame = 0

Query:   23 MGSIPYCDHHGWNWEPGQGPSPCMGETASFLLASSVLLYTIPLTKDTLHPFQRAAAAGSTAARVHAVQITLAIVQASIALVCGVLFARPRGMLSGANLLYSMSWTAASCTMAVALQRHPDCSKTLIWFWCGALVVNSVVLSSLRHASEVSGHRLPAEIGCLSWMSFFANAVLVVLQLFKPELDDTEGVYVRVVGREGVVPSASSGNNGWQAFWAGGGDTFDVAATAVSGDGRNTKSGSSSSRWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNESLLGTIGLDDQARDFSSPSKPKAGWNNXXXXXXQGRGQAGGCFRRVGGFFSSVVDRGNXXXXXXXXXXXXXXXXXXGAGWLQRQDSPFRRKLWGDGGSXXXXXXXXXXXXXXXXXXXXXXXXXPPSYSGAASIGVRAPPQVAAPIFGVAVTRWRLVDLDGEPLAHGSSSGDVAWTDRSRTTSXXXXXXXXXXXXXXXXXXXXXXAGLLPYGRASSMVESRFNDHLDPSLALDPNDGARVGEPLRVQFELVVRASGRGEMDWWGRGDAAEPGSPGAGHIGIHPPHGPAPATPG--AGDWRVWRSAADTLALYDALALRFGQEFCGRVSRPKFKTTLPCSAAVGASGFLGDDRSGSPPTPSSPDSPPALIVAPAAPHRVDILRDAKTVGAFLRSLLGLRQFL 702
            MGSIPYCDHHGWNWE GQGPSPCMGETASFLLASSVLLYTIPLTKDTLHPFQRAAAAGSTAARVHAVQITLAIVQASIALVCGVLF RPRGMLSGANLLYSMSWTAASCTMAVALQRHPDCSKTLIWFWCGALVVNSVVLSSLRHASEVSGH LPAEIGCLSWMSFFANAVLVVLQLFKPELDDTEGVYVRVVGREGVVPSASS NNGWQ FWAGGGDTFDVAATAVSGD RNTK        XXXXXXXXXXXXXXXXX                  TLNESLLG IGLDDQ R+FSSPSKP+AGWNNXXXXXX                         XXXXXXXXXXXXXXXXX GA WLQRQDSPFRRKLWGDGG                    XXXXXXPPSYSGAASIGVRAPP+VAAPIFGVAVTRWRLVDLDGEPLAHGSSSGDVAWTDRSR   XXXXXXXXXXXXXXXXXXXXXX       RASSMVESRFNDHLDPSLALDPNDGARVGEPL VQFELVVRASGRGEMDWWGRGD+AEP SPGAGHIGIHPPHGPAPATPG  AGDWRVWRSAADTLALYDALALRFGQEFCGRVSRPK KTTLP SAA GASG L DDRSGSPP PSSPDSPPALIVA AAPHRVD+LRDAKTVGAFLRSLLGLRQFL
Sbjct:    1 MGSIPYCDHHGWNWESGQGPSPCMGETASFLLASSVLLYTIPLTKDTLHPFQRAAAAGSTAARVHAVQITLAIVQASIALVCGVLFVRPRGMLSGANLLYSMSWTAASCTMAVALQRHPDCSKTLIWFWCGALVVNSVVLSSLRHASEVSGHHLPAEIGCLSWMSFFANAVLVVLQLFKPELDDTEGVYVRVVGREGVVPSASSANNGWQTFWAGGGDTFDVAATAVSGDDRNTK----XXXXXXXXXXXXXXXXXXXXXFEGGGAWPIAGGTNGRGGTLNESLLGIIGLDDQDREFSSPSKPEAGWNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGASWLQRQDSPFRRKLWGDGG--FASATTVTRASAQSALSAXXXXXXPPSYSGAASIGVRAPPRVAAPIFGVAVTRWRLVDLDGEPLAHGSSSGDVAWTDRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RASSMVESRFNDHLDPSLALDPNDGARVGEPLGVQFELVVRASGRGEMDWWGRGDSAEPSSPGAGHIGIHPPHGPAPATPGTGAGDWRVWRSAADTLALYDALALRFGQEFCGRVSRPKLKTTLPSSAA-GASGVLSDDRSGSPPRPSSPDSPPALIVASAAPHRVDMLRDAKTVGAFLRSLLGLRQFL 672

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig1220.1711.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig1220.1711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LM26_ECTSI	0.000e+0	84.31	PX domain-containing protein n=2 Tax=Ectocarpus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 120..136
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 201..702
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 148..168
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 180..200
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 109..119
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 88..108
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 137..147
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 169..179
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..87
None	No IPR available	TMHMM	TMhelix		coord: 115..137
None	No IPR available	TMHMM	TMhelix		coord: 86..108
None	No IPR available	TMHMM	TMhelix		coord: 178..200
None	No IPR available	TMHMM	TMhelix		coord: 147..165

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig1220	contig	E-fasciculatus_F_contig1220:834..3617 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig1220.1711.1	mRNA_E-fasciculatus_F_contig1220.1711.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig1220 834..3617 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig1220.1711.1 ID=prot_E-fasciculatus_F_contig1220.1711.1|Name=mRNA_E-fasciculatus_F_contig1220.1711.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=702bp
VQRSREDLSPCALHLRVRRWKCMGSIPYCDHHGWNWEPGQGPSPCMGETA
SFLLASSVLLYTIPLTKDTLHPFQRAAAAGSTAARVHAVQITLAIVQASI
ALVCGVLFARPRGMLSGANLLYSMSWTAASCTMAVALQRHPDCSKTLIWF
WCGALVVNSVVLSSLRHASEVSGHRLPAEIGCLSWMSFFANAVLVVLQLF
KPELDDTEGVYVRVVGREGVVPSASSGNNGWQAFWAGGGDTFDVAATAVS
GDGRNTKSGSSSSRWCCFGSRRGSGNDDFEGGGAWPTAGGANGGGGGGGG
TLNESLLGTIGLDDQARDFSSPSKPKAGWNNGGGGSSQGRGQAGGCFRRV
GGFFSSVVDRGNKAASAAAEQEEGRAGGGAGAGWLQRQDSPFRRKLWGDG
GSASATTVTRASAQSALGAGSSSSSSSPPSYSGAASIGVRAPPQVAAPIF
GVAVTRWRLVDLDGEPLAHGSSSGDVAWTDRSRTTSSSSARTATTLSASE
ATSTGGGGAGLLPYGRASSMVESRFNDHLDPSLALDPNDGARVGEPLRVQ
FELVVRASGRGEMDWWGRGDAAEPGSPGAGHIGIHPPHGPAPATPGAGDW
RVWRSAADTLALYDALALRFGQEFCGRVSRPKFKTTLPCSAAVGASGFLG
DDRSGSPPTPSSPDSPPALIVAPAAPHRVDILRDAKTVGAFLRSLLGLRQ
FL