prot_E-fasciculatus_F_contig12197.1704.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12197.1704.1
Unique Nameprot_E-fasciculatus_F_contig12197.1704.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length307
Homology
BLAST of mRNA_E-fasciculatus_F_contig12197.1704.1 vs. uniprot
Match: D8LCP2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP2_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 4.970e-168
Identity = 257/307 (83.71%), Postives = 265/307 (86.32%), Query Frame = 0
Query:    1 GGQTSGEHGKCGDGEIGIDEAAARMAGEVAQAQLPPEQPRYPLGNLIYEGSKLFWRTGESLRIAMHENKEKHCVAISTMLEGESDPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQSLPEDARAKLFDKARASVLSDYLLARLKLIDGGDADGSVTDTQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQETPAGPVEPPGEESLPVTKSDSIFPRGTPTPVVVKLPEDDGGGSGSFLLEDELVFSEVHTFSKHVSYKDFKRVENEVSEGLKDGHERIANAEKAQRRAHGSLENPYHRTSA 307
            GGQTSG HGK GDGEIGIDEAAARMAGEVAQAQLPPEQPR+PLG LIYEGSKLFWRTGESLRIAMHENKEKHC+AISTMLEGES+PFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQ LPEDARAKLFDKARASVLSDYLLARLKLIDG DADG+ TDTQA                               ETPA PVEPPGE SLPVTKSDSIFP GTPTPVVVKLPEDDGG SGSFLLEDELVFSE+HTFSKHVSYKDFKRVENEVSEGLKDGH+RI NA+KAQRRAHGSLENP+HRTSA
Sbjct:  172 GGQTSGGHGKRGDGEIGIDEAAARMAGEVAQAQLPPEQPRFPLGTLIYEGSKLFWRTGESLRIAMHENKEKHCIAISTMLEGESEPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQRLPEDARAKLFDKARASVLSDYLLARLKLIDGRDADGNATDTQASAAAISAAARLGLGGVGPGTAPESASTARAPETPAEPVEPPGEVSLPVTKSDSIFPIGTPTPVVVKLPEDDGGESGSFLLEDELVFSELHTFSKHVSYKDFKRVENEVSEGLKDGHDRIENADKAQRRAHGSLENPHHRTSA 478          
BLAST of mRNA_E-fasciculatus_F_contig12197.1704.1 vs. uniprot
Match: D8LSJ9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ9_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 1.070e-6
Identity = 35/117 (29.91%), Postives = 62/117 (52.99%), Query Frame = 0
Query:   42 PLGNLIYEGSKLFWRTGESLRIAMHENKEKHCVAISTMLEGESDPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQSLPEDARAKLFDKARASVLSDYLLARLKLIDGGDADG 158
            P+G L+++GS+ FWR+ E++ +A+H N ++  + IST        +P + VD   I V+  +AV    A       G+ +S+ +D R +  DKA  ++  +YL  R +   G +  G
Sbjct:  234 PIGELVHQGSRFFWRSKETIDVALHLNADEGLMTISTRCPERGYNYPAIFVDVSKIPVHKTEAVARANAV------GQFESMSKDERREATDKAMTALRVEYLQHRWRKSGGYNFHG 344          
BLAST of mRNA_E-fasciculatus_F_contig12197.1704.1 vs. uniprot
Match: A0A7S2BJX7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BJX7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 5.620e-6
Identity = 34/112 (30.36%), Postives = 57/112 (50.89%), Query Frame = 0
Query:   46 LIYEGSKLFWRTGESLRIAMHENKEKHCVAISTMLEGESDPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEI--------QSLPEDARAKLFDKARASVLSDYLLARLK 149
            +IYEG+KLFWRT E + I MHE    HC+ + +      +  P + ++  +I    +D   E + E   A + E         + L +D  A++ +  R  +LS+Y+L RL+
Sbjct:  175 VIYEGTKLFWRTHEKIDIVMHEYSALHCIVMCSYNATTDEAHPNIIINKTMIEDTIED---EAVQEQLSAQRQEYCLRKQIVGRKLTDDEEAEVEESVRRGILSNYILLRLQ 283          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12197.1704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCP2_ECTSI4.970e-16883.71EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LSJ9_ECTSI1.070e-629.91EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2BJX7_9STRA5.620e-630.36Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12197contigE-fasciculatus_F_contig12197:257..3324 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12197.1704.1mRNA_E-fasciculatus_F_contig12197.1704.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12197 257..3324 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12197.1704.1 ID=prot_E-fasciculatus_F_contig12197.1704.1|Name=mRNA_E-fasciculatus_F_contig12197.1704.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=307bp
GGQTSGEHGKCGDGEIGIDEAAARMAGEVAQAQLPPEQPRYPLGNLIYEG
SKLFWRTGESLRIAMHENKEKHCVAISTMLEGESDPFPVLKVDSRLIRVN
GKDAVLERIAEMTEADKGEIQSLPEDARAKLFDKARASVLSDYLLARLKL
IDGGDADGSVTDTQASAAAVSAAARLGLGGVGPDTDPESASAAQAQETPA
GPVEPPGEESLPVTKSDSIFPRGTPTPVVVKLPEDDGGGSGSFLLEDELV
FSEVHTFSKHVSYKDFKRVENEVSEGLKDGHERIANAEKAQRRAHGSLEN
PYHRTSA
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