mRNA_E-fasciculatus_F_contig12195.1703.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12195.1703.1
Unique NamemRNA_E-fasciculatus_F_contig12195.1703.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12195.1703.1 vs. uniprot
Match: A0A6H5KT05_9PHAE (Beta_helix domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT05_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 4.320e-113
Identity = 157/172 (91.28%), Postives = 167/172 (97.09%), Query Frame = 1 
Query:    1 DECVRLRNFVVGAVISDNVIQDCGVRDFVYNNSGKNGEGVYVGTSSTQWSDGPDECNDNTITGNTITPNGNECVDVKEGSTGTIVEDNTCSGQLDEDSGCFGSRGDGNIFRYNTASDCLGVGVRIGGWEVDGHEYGEDNSIYGNSFTRAALGGLSFFALPQGQVCGNSCQDG 516
            DECVRL++F+VGAVISDNVIQDCGVRDFVY NSGKNGEG+YVGTSSTQWSDGPDECNDNTITGNTITPNGNECVD+KEGSTGTIVE+NTCSGQLDEDSGCFGSRGDGN+FRYNTASDCLGVGVRIGGWEVDGH+YG+DNSIY NSFTRA  GGLSFFALPQG+VCGNSCQ G
Sbjct:  142 DECVRLKSFIVGAVISDNVIQDCGVRDFVYGNSGKNGEGIYVGTSSTQWSDGPDECNDNTITGNTITPNGNECVDIKEGSTGTIVEENTCSGQLDEDSGCFGSRGDGNVFRYNTASDCLGVGVRIGGWEVDGHKYGQDNSIYENSFTRAESGGLSFFALPQGKVCGNSCQGG 313
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BLAST of mRNA_E-fasciculatus_F_contig12195.1703.1 vs. uniprot
Match: D7FXR8_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR8_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 2.340e-72
Identity = 102/177 (57.63%), Postives = 135/177 (76.27%), Query Frame = 1 
Query:    4 ECVRLRNFVVGAVISDNVIQDCGVRDFVYNNSGKNGEGVYVGTSSTQWSDGPDECNDNTITGNTITPNGNECVDVKEGSTGTIVEDNTCSGQLDEDSGCFGSRGDGNIFRYNTASDCLGVGVRIGGWEVDGHEYGEDNSIYGNSFTRAALGGLSFFALPQGQVCGNSCQDGPCDVLG 534
            ECVRL++ V+ A +  N I +CGV D+++N+  KNGEGVY+GTSSTQW++G D CNDN ++GN I+ +GNECVD+KEG++G ++EDN CS QLD +SGC+ SRGDGN FRYN  +DC+G GVR+GGWEVDGH+YG  NS+YGN F     G L      QG +CGN+C+DG C ++G
Sbjct:  170 ECVRLKDSVINAQVMGNTISNCGVHDYMFNSGDKNGEGVYIGTSSTQWTNGEDTCNDNLVSGNRISTSGNECVDIKEGASGNVIEDNICSEQLDAESGCYDSRGDGNTFRYNVGTDCMGAGVRLGGWEVDGHQYGVGNSVYGNDFNAVGEGALKVLVGEQGDICGNTCEDGSCSLVG 346
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12195.1703.1 vs. uniprot
Match: D7FXR9_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR9_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 3.880e-72
Identity = 101/177 (57.06%), Postives = 134/177 (75.71%), Query Frame = 1 
Query:    4 ECVRLRNFVVGAVISDNVIQDCGVRDFVYNNSGKNGEGVYVGTSSTQWSDGPDECNDNTITGNTITPNGNECVDVKEGSTGTIVEDNTCSGQLDEDSGCFGSRGDGNIFRYNTASDCLGVGVRIGGWEVDGHEYGEDNSIYGNSFTRAALGGLSFFALPQGQVCGNSCQDGPCDVLG 534
            ECVRL++ VV A ++ N I +CGV D+++N+  KNGEGVY+GTSSTQW++G D CN N ++ N I+ +GNECVD+KEGS+G ++EDN CS QLD +SGC+ SRGDGN FRYN  S+C G GVR+GGWEVDGH+YG +NS+YGN F    +G L      QG +CGN+C++G C + G
Sbjct:  170 ECVRLKDSVVNAQVTGNTISNCGVHDYMFNSEDKNGEGVYIGTSSTQWTNGEDTCNGNVVSRNLISTSGNECVDIKEGSSGNVIEDNFCSDQLDAESGCYDSRGDGNTFRYNVGSECTGAGVRLGGWEVDGHQYGVNNSVYGNDFYAVGVGALKVLVGEQGDICGNTCEEGSCSLTG 346
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12195.1703.1 vs. uniprot
Match: D8LJ42_ECTSI (FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ42_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 1.580e-65
Identity = 108/203 (53.20%), Postives = 134/203 (66.01%), Query Frame = 1 
Query:    4 ECVRLRNFVVGAVISDNVIQDCGVRDFVYNNSGKNGEGVYVGTSSTQWSDG--------PDECNDNTITGNTITPNGNECVDVKEGSTGTIVEDNTCSGQLDEDSGCFGSRGDGNIFRYNTASDCLGVGVRIGGWEVDGHEYGEDNSIYGNSFTRAALGGLSFFALPQGQVCGNSCQDGPCDVLGGLSDEGLESTWDQPCDGS 588
            EC+R+RNFV   VI DN I+DCG+ D+ Y   GK GE +Y+GTSS QW+DG        PD CN N +TGN + P GNECVD+KEG+T  +VE N C  Q D +SGC+ SRG+ N FRYNTA +CLG G+R+GG E+DG  YG DN +YGNSF     G +     PQG +C NSC+DG CDV     DE +E +WDQ C  S
Sbjct:  224 ECIRMRNFVTNTVIIDNDIEDCGIYDYRYTFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNDCEDQRDVESGCYDSRGNENTFRYNTAENCLGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICENSCEDGDCDVSEEGDDEEIEDSWDQECPSS 426
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12195.1703.1 vs. uniprot
Match: D8LJ29_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ29_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 6.720e-65
Identity = 103/203 (50.74%), Postives = 128/203 (63.05%), Query Frame = 1 
Query:    4 ECVRLRNFVVGAVISDNVIQDCGVRDFVYNNSGKNGEGVYVGTSSTQWSDG--------PDECNDNTITGNTITPNGNECVDVKEGSTGTIVEDNTCSGQLDEDSGCFGSRGDGNIFRYNTASDCLGVGVRIGGWEVDGHEYGEDNSIYGNSFTRAALGGLSFFALPQGQVCGNSCQDGPCDVLGGLSDEGLESTWDQPCDGS 588
            EC+R+RNFV  AVI +N I++CG+ DF +   GK GE +Y+GTSS QW DG        PD  N N +TGN + P GNECVD+KEG+T  +VE N C  Q D +SGC+ SRG+ N FRYNTA  CLG G+R+GG  +DG  YG DN +YGN F     G +     PQG +C NSC DG C V     DE +E +WDQ C  S
Sbjct:   29 ECIRMRNFVTNAVIQNNDIENCGIYDFRFQFDGKIGEAIYIGTSSNQWEDGTGDRVTNGPDGSNYNLVTGNELVPRGNECVDIKEGATMNVVEYNECEDQRDAESGCYDSRGNENTFRYNTAIQCLGAGIRLGGHTIDGFVYGVDNHVYGNEFLETEAGSIKSRVEPQGVICDNSCADGECGVSEEGDDEEIEGSWDQGCPAS 231
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12195.1703.1 vs. uniprot
Match: A0A6H5K1D2_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D2_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 8.580e-61
Identity = 103/206 (50.00%), Postives = 131/206 (63.59%), Query Frame = 1 
Query:    4 ECVRLRNFVVGAVISDNVIQDCGVRDFVYNNSGKNGEGVYVGTSSTQWSDG--------PDECNDNTITGNTITPNGNECVDVKEGSTGTIVEDNTCSGQLDEDSGCFGSRGDGNIFRYNTASDCLGVGVRIGGWEVDGHEYGEDNSIYGNSFTRAALGGLSFFALPQGQVCGNSCQDGPCDVLGGLSDEG---LESTWDQPCDGS 588
            EC+R+RNFV  AVI +N I++CG+ DF +   GK GE +Y+GTSS QW DG        PD  N N +TGN + P GNECVD+KEG+T  +VE N C  Q D +SGC+ SRG+ N FRYNTA  CLG G+R+GG  +DG  YG DN +YGN F     G +     PQG +C NSC +G C    G+S+EG   +E +WDQ C  S
Sbjct:  178 ECIRMRNFVTNAVIQNNDIENCGIYDFRFQFDGKIGEAIYIGTSSNQWEDGTGDRVTNGPDGSNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDAESGCYDSRGNENTFRYNTAVQCLGAGIRLGGHTIDGFVYGVDNHVYGNEFLETEAGSIKSRVEPQGVICDNSCANGEC----GVSEEGDEEIEGSWDQGCPSS 379
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12195.1703.1 vs. uniprot
Match: D7FZD2_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD2_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 1.670e-58
Identity = 94/193 (48.70%), Postives = 126/193 (65.28%), Query Frame = 1 
Query:    4 ECVRLRNFVVGAVISDNVIQDCGVRDFVYNNSGKNGEGVYVGTSSTQWSDGPDE-CNDNTITGNTITPNGNECVDVKEGSTGTIVEDNTCSGQLDEDSGCFGSRGDGNIFRYNTASDCLGVGVRIGGWEVDGHEYGEDNSIYGNSFTRAALGGLSFFALPQGQVCGNSCQDGPCDVLGGLSDEGLESTWDQPC 579
            ECVRL++ V  A I  N I +CG+ D+++ +   NG+GV +GTSS +W DG ++ C +N + GN I  + NECVDVKEG+ G ++EDN C  QLD +SGC+ SRG+ NIFR N  SDCLG GVR+GGWEVDG +YG  NS+Y N F     G L      QG +CGN+C    C ++G   D+ ++ TWD  C
Sbjct:  131 ECVRLKDGVTNAKIFSNTITNCGIHDYMFESGDMNGQGVCIGTSSDEWPDGEEDVCTNNLVAGNVIDTSANECVDVKEGAYGNVIEDNMCYNQLDINSGCYNSRGNDNIFRNNAGSDCLGAGVRLGGWEVDGFQYGVGNSVYDNDFNDVGFGALKIMVDGQGTICGNTCAGDDCQLIGDYLDDTID-TWDHAC 322
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BLAST of mRNA_E-fasciculatus_F_contig12195.1703.1 vs. uniprot
Match: UPI00036AEC55 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI00036AEC55)

HSP 1 Score: 178 bits (452), Expect = 2.070e-51
Identity = 95/176 (53.98%), Postives = 110/176 (62.50%), Query Frame = 1 
Query:    4 ECVRLRNFVVGAVISDNVIQDCGVRDFVYNNSGKNGEGVYVGTSSTQWSDG------PDECNDNTITGNTITPNGNECVDVKEGSTGTIVEDNTCSGQLDEDSGCFGSRGDGNIFRYNTASDCLGVGVRIGGWEVDGHEYGEDNSIYGNSFTRAALGGLSFFALPQGQVCGNSCQD 513
            ECVRLR +V  A I DN   +CGV DF +NN GKNGE +YVGTSS QW DG      PD  N N I  N    NGNECVD+KEG+   +VE N CSGQ D +S  F SRGD NIFRYN + D  G GVR+GG  VDG +YG +N +YGN     A  G+   A PQ +VCGN   D
Sbjct:  172 ECVRLRYYVTEAEIFDNTFYNCGVYDFKFNNGGKNGEAIYVGTSSNQWDDGKNPTGGPDPSNHNWIHHNKFLTNGNECVDIKEGAEYNLVEYNICSGQQDPNSAGFDSRGDHNIFRYNVSHDNKGAGVRLGGNTVDGRQYGVNNQVYGNLLYNNAQAGVKLMAAPQEKVCGNPTSD 347
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12195.1703.1 vs. uniprot
Match: A0A1G2MDL9_9BACT (F5/8 type C domain-containing protein n=1 Tax=Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_49_25 TaxID=1802305 RepID=A0A1G2MDL9_9BACT)

HSP 1 Score: 179 bits (455), Expect = 2.860e-50
Identity = 91/189 (48.15%), Postives = 120/189 (63.49%), Query Frame = 1 
Query:    4 ECVRLRNFVVGAVISDNVIQDCGVRDFVYNNSGKNGEGVYVGTSSTQWSDG------PDECNDNTITGNTITPNGNECVDVKEGSTGTIVEDNTCSGQLDEDSGCFGSRGDGNIFRYNTASDCLGVGVRIGGWEVDGHEYGEDNSIYGNSFTRAALGGLSFFALPQGQVCGNSCQDGPC-DVLGGLSDE 549
            EC+RLR F   + I+ N I +CG  DF++N  GKNGEG+Y+GTS+ QW DG      PDE  DN +  N I   GNEC+D+KEG+T  I+E NTC GQ D +SG F SRGDGNIFRYN     +G G+R+GG  V+G +YG++N +Y N+      GG+ F   PQG++CGN+       D  GG + E
Sbjct:    9 ECLRLRYFATKSEIAYNTIANCGAYDFLFNAGGKNGEGIYIGTSNKQWGDGKNPTNDPDETKDNLVHHNYIDTQGNECIDIKEGATANIIEYNTCRGQKDSESGGFDSRGDGNIFRYNDVRGSVGGGIRLGGASVNGIQYGKNNDVYENTIVDNKNGGIRFQTTPQGKICGNTMSGNTTGDSAGGFASE 197
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12195.1703.1 vs. uniprot
Match: D7G3L7_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L7_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 7.710e-47
Identity = 88/187 (47.06%), Postives = 112/187 (59.89%), Query Frame = 1 
Query:    4 ECVRLRNFVVGAVISDNVIQDCGVRDFVYNNSGKNGEGVYVGTSSTQWSDG------PDECNDNTITGNTITPNGNECVDVKEGSTGTIVEDNTCSGQLDEDSGCFGSRGDGNIFRYNTASDCLGVGVRIGGWEVDGHEYGEDNSIYGNSFTRAALGGLSFFALPQGQVCGNSCQDGPCDVLGGLSD 546
            ECVR+R FV  + + +N I +CG  DFV +   KNGEG+Y+GTSS QW DG      PDE + N    N     GNE +D+KEGS   IVEDN C+GQ D +S C  +RGD NIFR+NT  D LG G+RIGG ++DGH+YG++N +Y N        G+     PQG VC N       D+LG   D
Sbjct:  169 ECVRMRYFVTYSQVYNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSDEPDESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSN-------DILGSKYD 348
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12195.1703.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT05_9PHAE4.320e-11391.28Beta_helix domain-containing protein n=2 Tax=Ectoc... [more]
D7FXR8_ECTSI2.340e-7257.63FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FXR9_ECTSI3.880e-7257.06FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LJ42_ECTSI1.580e-6553.20FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LJ29_ECTSI6.720e-6550.74FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5K1D2_9PHAE8.580e-6150.00Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
D7FZD2_ECTSI1.670e-5848.70FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
UPI00036AEC552.070e-5153.98right-handed parallel beta-helix repeat-containing... [more]
A0A1G2MDL9_9BACT2.860e-5048.15F5/8 type C domain-containing protein n=1 Tax=Cand... [more]
D7G3L7_ECTSI7.710e-4747.06FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12195contigE-fasciculatus_F_contig12195:123..4058 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score183.7
Seed ortholog evalue8.3e-44
Seed eggNOG ortholog1121935.AQXX01000136_gene4114
EggNOG free text desc.Parallel beta-helix repeats
EggNOG OGs1NHJ7@1224,1SHNB@1236,COG3420@1,COG3420@2
COG Functional cat.P
Best tax levelGammaproteobacteria
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size603
Cds size603
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12195.1703.1prot_E-fasciculatus_F_contig12195.1703.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12195 123..4058 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927728.3356612-CDS-E-fasciculatus_F_contig12195:122..1921622927728.3356612-CDS-E-fasciculatus_F_contig12195:122..192Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12195 123..192 -
1695995668.6315567-CDS-E-fasciculatus_F_contig12195:122..1921695995668.6315567-CDS-E-fasciculatus_F_contig12195:122..192Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12195 123..192 -
1622927728.3507676-CDS-E-fasciculatus_F_contig12195:1225..13381622927728.3507676-CDS-E-fasciculatus_F_contig12195:1225..1338Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12195 1226..1338 -
1695995668.6433735-CDS-E-fasciculatus_F_contig12195:1225..13381695995668.6433735-CDS-E-fasciculatus_F_contig12195:1225..1338Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12195 1226..1338 -
1622927728.3632722-CDS-E-fasciculatus_F_contig12195:1862..19501622927728.3632722-CDS-E-fasciculatus_F_contig12195:1862..1950Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12195 1863..1950 -
1695995668.653073-CDS-E-fasciculatus_F_contig12195:1862..19501695995668.653073-CDS-E-fasciculatus_F_contig12195:1862..1950Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12195 1863..1950 -
1622927728.3772001-CDS-E-fasciculatus_F_contig12195:2783..29711622927728.3772001-CDS-E-fasciculatus_F_contig12195:2783..2971Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12195 2784..2971 -
1695995668.6624923-CDS-E-fasciculatus_F_contig12195:2783..29711695995668.6624923-CDS-E-fasciculatus_F_contig12195:2783..2971Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12195 2784..2971 -
1622927728.387605-CDS-E-fasciculatus_F_contig12195:3914..40581622927728.387605-CDS-E-fasciculatus_F_contig12195:3914..4058Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12195 3915..4058 -
1695995668.672027-CDS-E-fasciculatus_F_contig12195:3914..40581695995668.672027-CDS-E-fasciculatus_F_contig12195:3914..4058Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12195 3915..4058 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12195.1703.1

>prot_E-fasciculatus_F_contig12195.1703.1 ID=prot_E-fasciculatus_F_contig12195.1703.1|Name=mRNA_E-fasciculatus_F_contig12195.1703.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=201bp
DECVRLRNFVVGAVISDNVIQDCGVRDFVYNNSGKNGEGVYVGTSSTQWS
DGPDECNDNTITGNTITPNGNECVDVKEGSTGTIVEDNTCSGQLDEDSGC
FGSRGDGNIFRYNTASDCLGVGVRIGGWEVDGHEYGEDNSIYGNSFTRAA
LGGLSFFALPQGQVCGNSCQDGPCDVLGGLSDEGLESTWDQPCDGSNQSR
*
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mRNA from alignment at E-fasciculatus_F_contig12195:123..4058-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12195.1703.1 ID=mRNA_E-fasciculatus_F_contig12195.1703.1|Name=mRNA_E-fasciculatus_F_contig12195.1703.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3936bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12195:123..4058- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GATGAGTGCGTGCGCCTGAGGAACTTCGTCGTGGGCGCCGTGATCAGCGA
CAACGTTATCCAGGACTGCGGGGTGAGGGACTTCGTGTACAACAACAGCG
GGAAGAACGGGGAAGGGGTCTACGTCGGCACCTCCAGCACTCAGGTACTT
TTTTTTTTTTTTTCTTCCCATCATTGGACTCTGTCGTCTGCCCCTCTGGC
CCCCTCCCTTCCTCCACTTCTACTAGCTAGACGACCCAACCGGGGTCACG
TAGGAAGGGGGGGGTTGGACCCCCTCCTGCGGTTTCCTGCCTGAGATATT
TTTATCGCGAGAAGGGCACAGCAATCCCTTCCCTCGCGACTCGCGAAGTC
GATTTTGGTTTACTAGCCAAGACTGTACCCACGTGATGCGTTGATTGATA
GACCGCCTGGGAGACCTTGCCATCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCAGCGTTGTTGTTGTATCTCCGGCGACGCTATCACGT
GATCTGGGAGTGTTTTTCTTTACGTTTTGAGGTTCGCTTTCGATTACCTC
AAAAATGAAAAAATGATTGTCACCGGGTGTGAAGTTCCTTCTGTAAAAGA
GGGGGATGCGTTGGTTGATAGACCGCCTGGGAGACCTTGCCATGTCTCTT
TCTGCATTTCTGTTGTTGGTGTTGTTGATCATGATGGCGGTGTTGACGCT
GTCTTTGTCGTTGTCGACAATCAATCACGGTATGTCATGGTGGAGTGGCG
GCTTTGTTCTGTATTGTAGGGTTAGGGTAGGGTTAGTACCTCGATTTCGA
CGGCAGTCTGACGGGCCTGACTAGAGTGAAACGGCGACACGACAGCCCTA
GCCCAACCCCTACCCTGTTTGACAGTGGTAACGAGTAAAACCGTATCCCA
AAACCACTTGGACGGTGGTCTGACGCTCCTGAACAAGTGAATCGACGACA
CGACGCATAACACCTGAACCCTTCATTTCGACAGTGGTCTGACGGGCCCG
ACGAGTGCAACGACAACACCCCCAACCCCCGACCGTGACCAAATCCTACC
CCTAACGGCAACGCGATTACCCCAACCACTTGGACAGTGGTCTGACGGTC
CTGACGAGTGCAACGACAACACCATCACGGGCAACACCATCACCCCCAAC
GGGAACGAGTGCGTGGACGTCAAGGAGGGCTCGACGGGTACCATCGTCGA
GGACAACACGTGCAGCGGGCAGCTGGATGAGGACTCCGGGTGTTTCGGTT
CCAGGGGGGATGGCAATATTTTTCGGTGAGTTCGAGCGGTAGGCAATGTG
TGTTGTTGTTGCTGTCGTTGTTGTCGTTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGTTGTTGTTGTCGTCGTCGTTGTTGTCGTTCTTTTCAAC
CAGCGCTGCAGCTTTGCGGCGCAGAATAGCATCGTTCACGTCTAATTCTT
CCCCCTCCCTTTGCACTAACAAATAGTGACGACGTCGGGGGGATTGTCGT
CGTTGTCTCAAATCGAGAGGAATTAGAATCTGACCTTTTAGTGTTGAGTC
GTTAATCTCTTACCGTGCGGCTGTTAGGCGCTGGTACGACTTTATATAGG
ATTTGCTGTGGAACGGCAACACACAAAAAAAGAAAACATACATGTCATGC
TTTCCTTTATAAGGTTTAGTATGGCCATACATTAAACTTACGTTTTTTTA
ATCCAGATACAACAGCACGGCTTCGGACTGCCTAGACACTGGTACAGTAG
TGTGGTATTGTAGTTTGCTAAAATACTTATGTTGCGTTCCTGTATAGGAG
TTGGTTTTACCATGCATAAATAAATCTATGTTATTCGATCCAGGTACAAC
ACAGCTTCGGACTGCCTAGACATTGGTGCAGTAGTGTGGTATTGTAGTTT
GCTGAAATACTTATGTTGCGTTCCTGTATAGGAGGAATTGGTATGACCAT
GCATAAAATCTATGTTATTCGATCCAGGTACAACACAGCTTCGGACTGCC
TAGACATTGGTGCAATAGTGTGGTATTGTAGCATACAACTTTTGTTGCGT
CCCTGTATAATAGGAGTTGGTATGACCATGCACAAAATCTATGTTATTTT
CGATCCAGGTACAACACGGCTTCGGACTGCCTAGGGGTTGGCGTGCGCAT
CGGGGGCTGGGAGGTCGACGGCCACGAGTACGGTGAAGACAACAGCGTGA
GTTGGAGGCATGACACAAGATACCACACCCCCTGGAACGAATTTCAAAGC
TCGATTTCTCCACAACACGAAGGGAGAGGATGCCGACATCAAATAATGCG
TTGCTGTCGGAAAGTTCTCGGAAAGTTCTCGACGAGACGGTTCCAACGCC
ATTGCCATTTTCGACACCGTCACTGCTTTTCCGGCCGAGATATCGAGCTT
CGAAAGTCCGACACAGCCATGAGCCATCACATGCCTTCATACTTCAACCC
ACAGGACGGTTAATATCGGGGGGGGGGGGGGGGGGTGTAAACGCATGGCG
GAAGAATTCGGCCTTTTACCCCGCATCCCTACAACGCCTGAACGGAGAGA
TATGTATAAAATTGTTGGGGTCGGCTCGTCCGATGGACATGCATAAAGTT
TTGTGTTTTGTTTTGTTTTGTTGTAATTATGTAATTTTTGGTTTTGGGGA
CGCACTATCTAAAGTTCCTTTATTAATTTGTTTCCACTTGCTCCGACCAC
TGAAATAAAATATATTGCAGATCTACGGGAACAGCTTCACGAGAGCGGCG
TTGGGCGGCCTGAGCTTCTTCGCCCTCCCCCAGGGGCAGGTTTGCGGCAA
CTCGTGCCAAGACGGGCCGTGCGACGTGCTTGGGTGAGGGCGTACTCGCG
ATCTGCAATAAATCGCTTCAAGGGTAGACGTGTGTTGGACGTTTATCATA
ACACCTTCACGGCCCTTATTTAGAAGTTTTCTCCAAATAATTCATTCGCC
ATCTCGTTTAAAATAGATTTTCTCGTTCTTTAGCTTCATTTTCGTATTCT
GGCACTCTTAAAGAACAACTTGCTCTTTTCTTTTTCGTCTGTACAGTTGT
GATGATAATTGGCGCCAACCCACGTATGTATGCGTTCTGTTGACAAAGGC
TAGCCCGTTGGACCACGCAGTCAGCCCTCGGAAGAGACTAGCGATCGCAG
TAAATCAGCTCCAGGGTCGAAAAGTTCTTGAGCTACAGGAAGAGAGGCTA
CAATCCTCTCGCATAGAAAAATCGAAGGCACAGCACCGCAGGAGGGGTGG
GTAGGGGACCGCTTCGGTGCGACCACGGGTTGGAGAAGTAAAACGGCACG
AGTGTTGTGAGCGCTGATTTGAAGCGAACGAAGACATCAACAAAACTAAA
GAAAAAATGCGTAGTGGTTGTTGCGATGAAACTCGGCACCAATCCAGGTT
CGTGCGCTGTTCACGAAGGCTAGCCCATTGGACCACCCGGCCAGCGGCTG
GCTGAGTGTTCTCAAGGGCTAGCCGCTGATCAAGTGGTCTAATGGGCAGG
CCTCTGTAAACGTGTGGGAGCCCCGCTACCTACTGCTCTCGTTTTTTTTT
TTTTTTTCTCTACCATTATTGGACTCTGCCGTCTACCCCTCTCTCGTTAT
TTATTATGTGTATGTGCGTTCCAAATCGATTCTTTGCAGAGGGGATTGAG
TTACGACACTCCGACATTTTTTTCTTGGTATGAGTGCCTTCCAACTCGAT
TAAAGTGACCCACCCTTTTCCTCTTAGTATGCGTGTGTTCATGTGTTCCA
AATTGATGTTTTTCAGGAGGCTCTTGTTACGACACCCCCACCCACTTTTC
TTGGTATCAAGTATGTTCGAAATCGACTCAGTGACCCACCCATAATTTTT
CATGCTGATTTTACAGGGGGTTGAGTGACGAAGGTCTGGAGTCCACATGG
GACCAGCCCTGCGACGGCTCGAACCAATCCAGGTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12195:123..4058-

>mRNA_E-fasciculatus_F_contig12195.1703.1 ID=mRNA_E-fasciculatus_F_contig12195.1703.1|Name=mRNA_E-fasciculatus_F_contig12195.1703.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1206bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12195:123..4058- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GATGAGTGCGTGCGCCTGAGGAACTTCGTCGTGGGCGCCGTGATCAGCGA
CAACGTTATCCAGGACTGCGGGGTGAGGGACTTCGTGTACAACAACAGCG
GGAAGAACGGGGAAGGGGTCTACGTCGGCACCTCCAGCACTCAGGATGAG
TGCGTGCGCCTGAGGAACTTCGTCGTGGGCGCCGTGATCAGCGACAACGT
TATCCAGGACTGCGGGGTGAGGGACTTCGTGTACAACAACAGCGGGAAGA
ACGGGGAAGGGGTCTACGTCGGCACCTCCAGCACTCAGTGGTCTGACGGT
CCTGACGAGTGCAACGACAACACCATCACGGGCAACACCATCACCCCCAA
CGGGAACGAGTGCGTGGACGTCAAGGAGGGCTCGACGGGTACCATCGTCG
AGGACAACACGTGCAGCGGGCAGCTGGATGAGGACTCCGGGTGTTTCGGT
TCCAGGGGGGATGGCAATATTTTTCGTGGTCTGACGGTCCTGACGAGTGC
AACGACAACACCATCACGGGCAACACCATCACCCCCAACGGGAACGAGTG
CGTGGACGTCAAGGAGGGCTCGACGGGTACCATCGTCGAGGACAACACGT
GCAGCGGGCAGCTGGATGAGGACTCCGGGTGTTTCGGTTCCAGGGGGGAT
GGCAATATTTTTCGGTACAACACGGCTTCGGACTGCCTAGGGGTTGGCGT
GCGCATCGGGGGCTGGGAGGTCGACGGCCACGAGTACGGTGAAGACAACA
GCGTACAACACGGCTTCGGACTGCCTAGGGGTTGGCGTGCGCATCGGGGG
CTGGGAGGTCGACGGCCACGAGTACGGTGAAGACAACAGCATCTACGGGA
ACAGCTTCACGAGAGCGGCGTTGGGCGGCCTGAGCTTCTTCGCCCTCCCC
CAGGGGCAGGTTTGCGGCAACTCGTGCCAAGACGGGCCGTGCGACGTGCT
TGGATCTACGGGAACAGCTTCACGAGAGCGGCGTTGGGCGGCCTGAGCTT
CTTCGCCCTCCCCCAGGGGCAGGTTTGCGGCAACTCGTGCCAAGACGGGC
CGTGCGACGTGCTTGGGGGGTTGAGTGACGAAGGTCTGGAGTCCACATGG
GACCAGCCCTGCGACGGCTCGAACCAATCCAGGTGAGGGGTTGAGTGACG
AAGGTCTGGAGTCCACATGGGACCAGCCCTGCGACGGCTCGAACCAATCC
AGGTGA
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