prot_E-fasciculatus_F_contig12191.1699.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12191.1699.1
Unique Nameprot_E-fasciculatus_F_contig12191.1699.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length55
Homology
BLAST of mRNA_E-fasciculatus_F_contig12191.1699.1 vs. uniprot
Match: A0A6H5JHA1_9PHAE (RB_A domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA1_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 1.620e-28
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 0
Query:    1 QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNSVTPEVTFKRIIEQYKQL 55
            QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVN VTPEVTFKRIIEQYKQL
Sbjct: 1050 QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNGVTPEVTFKRIIEQYKQL 1104          
BLAST of mRNA_E-fasciculatus_F_contig12191.1699.1 vs. uniprot
Match: D7G8E5_ECTSI (Putative retinoblastoma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E5_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 1.620e-28
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 0
Query:    1 QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNSVTPEVTFKRIIEQYKQL 55
            QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVN VTPEVTFKRIIEQYKQL
Sbjct:  898 QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNGVTPEVTFKRIIEQYKQL 952          
BLAST of mRNA_E-fasciculatus_F_contig12191.1699.1 vs. uniprot
Match: A0A067CHR0_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CHR0_SAPPC)

HSP 1 Score: 83.2 bits (204), Expect = 2.720e-17
Identity = 33/54 (61.11%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNSVTPEVTFKRIIEQYKQ 54
            Q+WT +K C++   E+L+DRH+ HVILCS Y VCKVN V PEVTFKR++E YK+
Sbjct:  635 QIWTSVKECISNHAELLRDRHVDHVILCSFYGVCKVNHVVPEVTFKRVLEAYKR 688          
BLAST of mRNA_E-fasciculatus_F_contig12191.1699.1 vs. uniprot
Match: A0A2D4CF97_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF97_PYTIN)

HSP 1 Score: 83.2 bits (204), Expect = 2.730e-17
Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    1 QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNSVTPEVTFKRIIEQYKQL 55
            QVWT IK C++   ++LKDRHL  VILCS Y VCKVN V PEVTFKRII+ YK+L
Sbjct: 1238 QVWTAIKECISTHHDLLKDRHLDQVILCSIYGVCKVNHVKPEVTFKRIIDAYKKL 1292          
BLAST of mRNA_E-fasciculatus_F_contig12191.1699.1 vs. uniprot
Match: A0A1W0A2A8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2A8_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 3.720e-17
Identity = 34/54 (62.96%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNSVTPEVTFKRIIEQYKQ 54
            Q+WT +K C++   E+LKDRHL H+ILCS Y VCKVN V PEVTFKR++E YK+
Sbjct:  627 QIWTCVKECISTYQELLKDRHLDHLILCSFYGVCKVNHVLPEVTFKRVLEAYKR 680          
BLAST of mRNA_E-fasciculatus_F_contig12191.1699.1 vs. uniprot
Match: A0A8K1CKQ6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKQ6_PYTOL)

HSP 1 Score: 82.4 bits (202), Expect = 5.080e-17
Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    1 QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNSVTPEVTFKRIIEQYKQL 55
            Q WT IK C++ + ++L+DRHL HV+LCS Y VCKVN V PEVTFKRII+ YK+L
Sbjct:  796 QAWTAIKECLSSQHQLLRDRHLDHVVLCSLYGVCKVNHVKPEVTFKRIIDCYKKL 850          
BLAST of mRNA_E-fasciculatus_F_contig12191.1699.1 vs. uniprot
Match: A0A485L9V0_9STRA (Aste57867_17626 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9V0_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 9.460e-17
Identity = 33/55 (60.00%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    1 QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNSVTPEVTFKRIIEQYKQL 55
            QVWT +K C++   ++L+DRHL H++LCS Y VCKVN V PEVTFKRI++ YK+L
Sbjct:  614 QVWTTVKECISGHHDLLRDRHLDHMLLCSFYGVCKVNHVVPEVTFKRILDAYKRL 668          
BLAST of mRNA_E-fasciculatus_F_contig12191.1699.1 vs. uniprot
Match: F0WHE8_9STRA (Uncharacterized protein AlNc14C100G6011 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHE8_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 9.470e-17
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    1 QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNSVTPEVTFKRIIEQYKQL 55
            QVWT +K C+    E++KDRH+ H+ILCS Y VCKVN + PEVTF+R+IE YK+L
Sbjct:  816 QVWTAVKECLTYHHELVKDRHVDHIILCSLYGVCKVNLIKPEVTFRRVIEVYKKL 870          
BLAST of mRNA_E-fasciculatus_F_contig12191.1699.1 vs. uniprot
Match: A0A024GK70_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GK70_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.410e-16
Identity = 32/55 (58.18%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    1 QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNSVTPEVTFKRIIEQYKQL 55
            QVWT +K C+    E++KDRH+ H+ILCS Y VCKVN + PEVTF+R+I+ YK+L
Sbjct:  820 QVWTAVKECLTYHHELVKDRHVDHIILCSLYGVCKVNLIKPEVTFRRVIDVYKKL 874          
BLAST of mRNA_E-fasciculatus_F_contig12191.1699.1 vs. uniprot
Match: A0A1V9YMN7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMN7_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 6.150e-16
Identity = 32/54 (59.26%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    1 QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNSVTPEVTFKRIIEQYKQ 54
            QVWT +K C++   E+L++RHL H+ILCS Y VCKVN V PEVTFKR+ + YK+
Sbjct:  642 QVWTCVKECISNHQELLRNRHLDHLILCSFYGVCKVNRVVPEVTFKRVTDAYKR 695          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12191.1699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHA1_9PHAE1.620e-2898.18RB_A domain-containing protein n=2 Tax=Ectocarpus ... [more]
D7G8E5_ECTSI1.620e-2898.18Putative retinoblastoma n=1 Tax=Ectocarpus silicul... [more]
A0A067CHR0_SAPPC2.720e-1761.11Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A2D4CF97_PYTIN2.730e-1767.27Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A1W0A2A8_9STRA3.720e-1762.96Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A8K1CKQ6_PYTOL5.080e-1763.64Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A485L9V0_9STRA9.460e-1760.00Aste57867_17626 protein n=1 Tax=Aphanomyces stella... [more]
F0WHE8_9STRA9.470e-1760.00Uncharacterized protein AlNc14C100G6011 n=1 Tax=Al... [more]
A0A024GK70_9STRA2.410e-1658.18Uncharacterized protein n=2 Tax=Albugo candida Tax... [more]
A0A1V9YMN7_9STRA6.150e-1659.26Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002719Retinoblastoma-associated protein, B-boxPFAMPF01857RB_Bcoord: 1..54
e-value: 2.3E-17
score: 63.3
NoneNo IPR availableGENE3D1.10.472.10coord: 1..55
e-value: 4.4E-18
score: 67.5
IPR033057Retinoblastoma-associated proteinPANTHERPTHR13742:SF29RETINOBLASTOMA-ASSOCIATED PROTEINcoord: 2..55
IPR028309Retinoblastoma protein familyPANTHERPTHR13742RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATEDcoord: 2..55
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 1..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12191contigE-fasciculatus_F_contig12191:1401..2144 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12191.1699.1mRNA_E-fasciculatus_F_contig12191.1699.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12191 1401..2144 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12191.1699.1 ID=prot_E-fasciculatus_F_contig12191.1699.1|Name=mRNA_E-fasciculatus_F_contig12191.1699.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=55bp
QVWTVIKRCVAQRTEILKDRHLHHVILCSTYSVCKVNSVTPEVTFKRIIE
QYKQL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf
IPR028309RB_fam
IPR033057RB1
IPR002719RB_B