mRNA_E-fasciculatus_F_contig1219.1698.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1219.1698.1 vs. uniprot
Match: B8BXV2_THAPS (C2 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV2_THAPS) HSP 1 Score: 143 bits (360), Expect = 3.230e-37 Identity = 69/92 (75.00%), Postives = 79/92 (85.87%), Query Frame = 1
Query: 1 EVKLMTLREMFPFVRFRIGGLVVSRSVKYLGKLASKLSDQETRDGWWAELREEIRSHAMLLCCTHVIGYSETTSIHDDVVLLSATGTAALVR 276
EV+L+T+ E P VR RIGGLV +RSVKYLGKLASKLSDQETRDGWW ELR+EIRSHA LCC HVIGY+E+++IHDDV +LS TGTAA VR
Sbjct: 433 EVQLLTMNEFGPRVRVRIGGLVTARSVKYLGKLASKLSDQETRDGWWTELRDEIRSHARTLCCWHVIGYNESSTIHDDVCVLSITGTAATVR 524
BLAST of mRNA_E-fasciculatus_F_contig1219.1698.1 vs. uniprot
Match: A0A7S4JAY9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAY9_9STRA) HSP 1 Score: 141 bits (356), Expect = 5.290e-37 Identity = 68/92 (73.91%), Postives = 79/92 (85.87%), Query Frame = 1
Query: 1 EVKLMTLREMFPFVRFRIGGLVVSRSVKYLGKLASKLSDQETRDGWWAELREEIRSHAMLLCCTHVIGYSETTSIHDDVVLLSATGTAALVR 276
EV+L+TLR+ VR RIGGLV +RSVKYLGKLASKLSDQETRDGWW+ELR+EIRSHA LCC+HV GY E ++IHDDV++LS TGTAA VR
Sbjct: 255 EVQLLTLRDFGTRVRVRIGGLVTARSVKYLGKLASKLSDQETRDGWWSELRDEIRSHARTLCCSHVTGYVEASTIHDDVIVLSVTGTAATVR 346
BLAST of mRNA_E-fasciculatus_F_contig1219.1698.1 vs. uniprot
Match: A0A7S4N180_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N180_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.140e-36 Identity = 68/92 (73.91%), Postives = 79/92 (85.87%), Query Frame = 1
Query: 1 EVKLMTLREMFPFVRFRIGGLVVSRSVKYLGKLASKLSDQETRDGWWAELREEIRSHAMLLCCTHVIGYSETTSIHDDVVLLSATGTAALVR 276
EV+L+TLR+ VR RIGGLV +RSVKYLGKLASKLSDQETRDGWW+ELR+EIRSHA LCC+HV GY E ++IHDDV++LS TGTAA VR
Sbjct: 124 EVQLLTLRDFGTRVRVRIGGLVTARSVKYLGKLASKLSDQETRDGWWSELRDEIRSHARTLCCSHVTGYVEASTIHDDVIVLSVTGTAATVR 215
BLAST of mRNA_E-fasciculatus_F_contig1219.1698.1 vs. uniprot
Match: A0A7S2E6P7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6P7_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.440e-36 Identity = 65/92 (70.65%), Postives = 77/92 (83.70%), Query Frame = 1
Query: 1 EVKLMTLREMFPFVRFRIGGLVVSRSVKYLGKLASKLSDQETRDGWWAELREEIRSHAMLLCCTHVIGYSETTSIHDDVVLLSATGTAALVR 276
EV+L+TL+E VR RIGGLV +RSVKYL +AS+LSDQETRDGWW+ELR+EIRSHA LCC HVIGY+E T+I+DDV +LS TGTAA VR
Sbjct: 30 EVQLLTLKEFGTRVRVRIGGLVTARSVKYLANIASRLSDQETRDGWWSELRDEIRSHARTLCCWHVIGYTEATTIYDDVCVLSITGTAATVR 121
BLAST of mRNA_E-fasciculatus_F_contig1219.1698.1 vs. uniprot
Match: A0A1Z5KM14_FISSO (C2 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM14_FISSO) HSP 1 Score: 139 bits (350), Expect = 7.400e-36 Identity = 64/91 (70.33%), Postives = 77/91 (84.62%), Query Frame = 1
Query: 4 VKLMTLREMFPFVRFRIGGLVVSRSVKYLGKLASKLSDQETRDGWWAELREEIRSHAMLLCCTHVIGYSETTSIHDDVVLLSATGTAALVR 276
V+L+TLR+ P VR R+GGLV +RSVKYLG LASKLSDQETRD WW ELR+EIR+HA +LCCTH++GY E ++IHDDV +LS TGTAA VR
Sbjct: 393 VQLLTLRDFDPSVRIRLGGLVTARSVKYLGNLASKLSDQETRDSWWTELRDEIRAHAKILCCTHIVGYLEASTIHDDVAILSITGTAATVR 483
BLAST of mRNA_E-fasciculatus_F_contig1219.1698.1 vs. uniprot
Match: B7G5C6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G5C6_PHATC) HSP 1 Score: 138 bits (348), Expect = 1.380e-35 Identity = 65/92 (70.65%), Postives = 77/92 (83.70%), Query Frame = 1
Query: 1 EVKLMTLREMFPFVRFRIGGLVVSRSVKYLGKLASKLSDQETRDGWWAELREEIRSHAMLLCCTHVIGYSETTSIHDDVVLLSATGTAALVR 276
+V+L+T+R+ P VR R GGLV +RSVKYLG LASKLSDQETRD WW ELR+EIRSHA +LCC+HVIGY E ++IHDDV +LS TGTAA VR
Sbjct: 379 DVQLLTVRDFEPAVRVRFGGLVTARSVKYLGNLASKLSDQETRDSWWTELRDEIRSHAKILCCSHVIGYLEASTIHDDVAILSITGTAATVR 470
BLAST of mRNA_E-fasciculatus_F_contig1219.1698.1 vs. uniprot
Match: A0A448YU60_9STRA (C2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YU60_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.380e-35 Identity = 70/102 (68.63%), Postives = 80/102 (78.43%), Query Frame = 1
Query: 1 EVKLMTLREMFPFVRFRIGGLVVSRSVKYLGKLASKLSDQETRDGWWAELREEIRSHAMLLCCTHVIGYSETTSIHDDVVLLSATGTAALVR---DPHPRRR 297
EVKL+TLR+ P VR RIGGLV +RSVKYLG LASKLSDQE RD WW ELR+EIRSHA +LCC+HVIGY E ++IH+DV +LS TGTA VR D H RR
Sbjct: 414 EVKLLTLRDFDPRVRVRIGGLVTARSVKYLGNLASKLSDQEQRDSWWTELRDEIRSHAKILCCSHVIGYLEASTIHEDVAVLSITGTACTVRGLPDMHLSRR 515
BLAST of mRNA_E-fasciculatus_F_contig1219.1698.1 vs. uniprot
Match: K0T113_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T113_THAOC) HSP 1 Score: 137 bits (346), Expect = 2.540e-35 Identity = 64/92 (69.57%), Postives = 78/92 (84.78%), Query Frame = 1
Query: 1 EVKLMTLREMFPFVRFRIGGLVVSRSVKYLGKLASKLSDQETRDGWWAELREEIRSHAMLLCCTHVIGYSETTSIHDDVVLLSATGTAALVR 276
+V+L+T+ P VR RIGGLV +RSVKYLG LASKLSDQETRDGWW ELR+EI+SHA +LCC+HV+GY E+++IHDDV +LS TGTAA VR
Sbjct: 121 DVRLLTVNAFDPRVRVRIGGLVTARSVKYLGNLASKLSDQETRDGWWTELRDEIKSHAKILCCSHVVGYVESSTIHDDVCVLSVTGTAATVR 212
BLAST of mRNA_E-fasciculatus_F_contig1219.1698.1 vs. uniprot
Match: A0A836CKY6_9STRA (C2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKY6_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.590e-35 Identity = 65/90 (72.22%), Postives = 78/90 (86.67%), Query Frame = 1
Query: 1 EVKLMTLREMFPFVRFRIGGLVVSRSVKYLGKLASKLSDQETRDGWWAELREEIRSHAMLLCCTHVIGYSETTSIHDDVVLLSATGTAAL 270
+V+L+T+ E P V+ RIGGLV+SRSVK LGKLASKLSDQETRDGWWAELREE+RSHA +L C+HV+GY E T+IHDDV +L+ATGTA L
Sbjct: 390 DVQLLTMTEFEPHVKVRIGGLVMSRSVKNLGKLASKLSDQETRDGWWAELREELRSHAKMLSCSHVVGYREATTIHDDVCILAATGTAVL 479
BLAST of mRNA_E-fasciculatus_F_contig1219.1698.1 vs. uniprot
Match: A0A1E7F3B6_9STRA (C2 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3B6_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.650e-34 Identity = 64/92 (69.57%), Postives = 76/92 (82.61%), Query Frame = 1
Query: 1 EVKLMTLREMFPFVRFRIGGLVVSRSVKYLGKLASKLSDQETRDGWWAELREEIRSHAMLLCCTHVIGYSETTSIHDDVVLLSATGTAALVR 276
EV+L+TLR+ P VR RIGGLV +RSVKYLG LASKLSDQE RD WW ELR+EIRSHA +LCC+HV+GY E ++IH+DV +LS TGTA VR
Sbjct: 396 EVQLLTLRDFDPRVRVRIGGLVTARSVKYLGNLASKLSDQEQRDSWWTELRDEIRSHAKILCCSHVVGYLEASTIHEDVAVLSITGTACSVR 487 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1219.1698.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1219.1698.1 >prot_E-fasciculatus_F_contig1219.1698.1 ID=prot_E-fasciculatus_F_contig1219.1698.1|Name=mRNA_E-fasciculatus_F_contig1219.1698.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=115bp MTLREMFPFVRFRIGGLVVSRSVKYLGKLASKLSDQETRDGWWAELREEIback to top mRNA from alignment at E-fasciculatus_F_contig1219:17598..18835- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1219.1698.1 ID=mRNA_E-fasciculatus_F_contig1219.1698.1|Name=mRNA_E-fasciculatus_F_contig1219.1698.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1238bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1219:17598..18835- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1219:17598..18835- >mRNA_E-fasciculatus_F_contig1219.1698.1 ID=mRNA_E-fasciculatus_F_contig1219.1698.1|Name=mRNA_E-fasciculatus_F_contig1219.1698.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=690bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1219:17598..18835- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |