mRNA_E-fasciculatus_F_contig1216.1681.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1216.1681.1 vs. uniprot
Match: D7FN66_ECTSI (Cysteine-rich PDZ-binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN66_ECTSI) HSP 1 Score: 226 bits (575), Expect = 3.960e-75 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1
Query: 1 MVCEKCETKLSKVIVPDKWKDGARNTTGGDSGGRRVGHENMLLKHGAAKRRNNRFTPLTRVCRICKTKVNQDHHYCQECAFSKGICGMCGRKTDDITNQRRTAK 312
MVCEKCETKLSKVIVPDKWKDGARNTTGGDSGGRRVGHENMLLKHGAAKRRNNRFTPLTRVCRICKTKVNQDHHYCQECAFSKGICGMCGRKTDDITNQRRTAK
Sbjct: 1 MVCEKCETKLSKVIVPDKWKDGARNTTGGDSGGRRVGHENMLLKHGAAKRRNNRFTPLTRVCRICKTKVNQDHHYCQECAFSKGICGMCGRKTDDITNQRRTAK 104
BLAST of mRNA_E-fasciculatus_F_contig1216.1681.1 vs. uniprot
Match: A0A024UK59_9STRA (Cysteine-rich PDZ-binding protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024UK59_9STRA) HSP 1 Score: 132 bits (331), Expect = 5.190e-38 Identity = 60/98 (61.22%), Postives = 71/98 (72.45%), Query Frame = 1
Query: 1 MVCEKCETKLSKVIVPDKWKDGARNTTGGDSGGRRVGHENMLLKHGAAKRRNNRFTPLTRVCRICKTKVNQDHHYCQECAFSKGICGMCGRKTDDITN 294
MVC+KCE KLSKVIVPD+WKDGARNT GG GGR++ +L K +RFTP++R CRICKTKV QD HYCQ C++ KGIC MCGRK + N
Sbjct: 1 MVCDKCEAKLSKVIVPDRWKDGARNTAGGKDGGRKIAGNALLGK-------KHRFTPMSRSCRICKTKVAQDAHYCQNCSYQKGICAMCGRKIMETKN 91
BLAST of mRNA_E-fasciculatus_F_contig1216.1681.1 vs. uniprot
Match: A0A1V9Z2F1_9STRA (Cysteine-rich PDZ-binding protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z2F1_9STRA) HSP 1 Score: 132 bits (331), Expect = 5.190e-38 Identity = 59/95 (62.11%), Postives = 72/95 (75.79%), Query Frame = 1
Query: 1 MVCEKCETKLSKVIVPDKWKDGARNTTGGDSGGRRVGHENMLLKHGAAKRRNNRFTPLTRVCRICKTKVNQDHHYCQECAFSKGICGMCGRKTDD 285
MVC KCE KLSK+IVPDKWKDGARNTTGG GGR++ + L K +RFTP++R CRICK+KV+Q+ HYCQ+C++ KGIC MCGRK D
Sbjct: 1 MVCGKCEEKLSKLIVPDKWKDGARNTTGGKDGGRKIAQNSALGK-------KHRFTPMSRACRICKSKVSQNAHYCQDCSYKKGICAMCGRKIAD 88
BLAST of mRNA_E-fasciculatus_F_contig1216.1681.1 vs. uniprot
Match: K3X4G6_GLOUD (Cysteine-rich PDZ-binding protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4G6_GLOUD) HSP 1 Score: 129 bits (324), Expect = 6.050e-37 Identity = 59/95 (62.11%), Postives = 68/95 (71.58%), Query Frame = 1
Query: 1 MVCEKCETKLSKVIVPDKWKDGARNTTGGDSGGRRVGHENMLLKHGAAKRRNNRFTPLTRVCRICKTKVNQDHHYCQECAFSKGICGMCGRKTDD 285
MVC+KCE KLSK++VPDKW DGARNTTGG GGR+VG +L K+R RFTP+ R CRICK K Q HYC +CA+ KGIC MCGRK D
Sbjct: 1 MVCDKCEEKLSKLVVPDKWTDGARNTTGGKDGGRKVGGNRLL------KKRAERFTPMERKCRICKCKAGQHCHYCNQCAYKKGICAMCGRKVLD 89
BLAST of mRNA_E-fasciculatus_F_contig1216.1681.1 vs. uniprot
Match: F0Y286_AURAN (Cysteine-rich PDZ-binding protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y286_AURAN) HSP 1 Score: 128 bits (322), Expect = 1.120e-36 Identity = 60/96 (62.50%), Postives = 68/96 (70.83%), Query Frame = 1
Query: 1 MVCEKCETKLSKVIVPDKWKDGARNTTGGDSGGRRVGHENMLLKHGAAKRRNNRFTPLTRVCRICKTKVNQDHHYCQECAFSKGICGMCGRKTDDI 288
MVC+ CE KLSKVIVPDKWKDGARN TGGD GGR + N LL+ + R RFT R C+ICK+KV QD HYCQECA GIC CG+K DD+
Sbjct: 1 MVCQDCEKKLSKVIVPDKWKDGARNVTGGDDGGRATTYRNSLLQ---VRGRTQRFTAGVRGCKICKSKVAQDAHYCQECAHHHGICARCGKKVDDL 93
BLAST of mRNA_E-fasciculatus_F_contig1216.1681.1 vs. uniprot
Match: A0A8K1FKJ9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKJ9_PYTOL) HSP 1 Score: 128 bits (322), Expect = 1.330e-36 Identity = 59/95 (62.11%), Postives = 71/95 (74.74%), Query Frame = 1
Query: 1 MVCEKCETKLSKVIVPDKWKDGARNTTGGDSGGRRVGHENMLLKHGAAKRRNNRFTPLTRVCRICKTKVNQDHHYCQECAFSKGICGMCGRKTDD 285
MVC+KCE KLSK++VPDKWKDGARNTTGG GGR VG + L + ++R+NRF PL R C+ICK KV Q +YC +CA+ KGIC MCGRK D
Sbjct: 1 MVCDKCEEKLSKLVVPDKWKDGARNTTGGKDGGRAVGSASRLSEK---RQRSNRFAPLERSCKICKGKVAQRAYYCNQCAYKKGICAMCGRKVVD 92
BLAST of mRNA_E-fasciculatus_F_contig1216.1681.1 vs. uniprot
Match: F0WBV1_9STRA (Cysteine-rich PDZ-binding protein n=3 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBV1_9STRA) HSP 1 Score: 133 bits (334), Expect = 5.820e-36 Identity = 60/104 (57.69%), Postives = 76/104 (73.08%), Query Frame = 1
Query: 1 MVCEKCETKLSKVIVPDKWKDGARNTTGGDSGGRRVGHENMLLKHGAAKRRNNRFTPLTRVCRICKTKVNQDHHYCQECAFSKGICGMCGRKTDDITNQRRTAK 312
MVCEKCE KL+ +IVPDKWKDGARN TGG GGR VG ++ K KR +NRF+P+ R CRIC++K+ Q+ HYC +CA+ KGIC MCGRK DI+ ++K
Sbjct: 1 MVCEKCEAKLTTLIVPDKWKDGARNVTGGKDGGRAVGTNKLVEK----KRISNRFSPMERRCRICRSKIGQNAHYCNQCAYQKGICSMCGRKMLDISQYNMSSK 100
BLAST of mRNA_E-fasciculatus_F_contig1216.1681.1 vs. uniprot
Match: A0A3F2RG60_9STRA (Cysteine-rich PDZ-binding protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RG60_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.440e-33 Identity = 53/92 (57.61%), Postives = 66/92 (71.74%), Query Frame = 1
Query: 1 MVCEKCETKLSKVIVPDKWKDGARNTTGGDSGGRRVGHENMLLKHGAAKRRNNRFTPLTRVCRICKTKVNQDHHYCQECAFSKGICGMCGRK 276
MVC KCE KLSK++VPDKWKDGARN TGG GGR VG++ L K K R+ RF+P+ R CR+CK+ +YC +CA+ KGIC MCG+K
Sbjct: 1 MVCSKCEEKLSKLVVPDKWKDGARNVTGGKDGGRAVGNDRSLTK----KSRSTRFSPVVRKCRLCKSSTAPKAYYCNQCAYKKGICSMCGKK 88
BLAST of mRNA_E-fasciculatus_F_contig1216.1681.1 vs. uniprot
Match: A0A836CAK2_9STRA (Cysteine-rich PDZ-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK2_9STRA) HSP 1 Score: 118 bits (296), Expect = 2.250e-32 Identity = 60/121 (49.59%), Postives = 79/121 (65.29%), Query Frame = 1
Query: 1 MVCEKCETKLSKVIVPDKWKD--------GARNTT-----GGDSGGRRVGHENMLLKHGAAK--RRNNRFTPLTR--VCRICKTKVNQDHHYCQECAFSKGICGMCGRKTDDITNQRRTAK 312
MVCEKC++KL+K+ PD W+D GAR GG SGGR G +NMLLKH A++ ++ NRF P+ R CRICK+KV +D HYCQ+CA+ KGIC MCG+K D + + +AK
Sbjct: 1 MVCEKCQSKLTKLAAPDAWQDRSKPAAGSGARVEATVAIGGGSSGGRPAGPQNMLLKHKASQLGKKANRFNPIERQRTCRICKSKVTEDKHYCQQCAYQKGICAMCGKKMMDTSEYKMSAK 121
BLAST of mRNA_E-fasciculatus_F_contig1216.1681.1 vs. uniprot
Match: A0A8J2S3T4_9STRA (Cysteine-rich PDZ-binding protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S3T4_9STRA) HSP 1 Score: 123 bits (309), Expect = 3.890e-32 Identity = 59/101 (58.42%), Postives = 69/101 (68.32%), Query Frame = 1
Query: 1 MVCEKCETKLSKVIVPDKWKDGARNTTGGDSGGRRVGHENMLLKHGAAKRRNNRFTPLTRVCRICKTKVNQDHHYCQECAFSKGICGMCGRKTDDITNQRR 303
MVC+ CE KLSKVIVPDKWKDGARN TGG GGR + N LL+ A +R F + CRICK+KV QD +YCQECA GIC MCG++ DD+ RR
Sbjct: 1 MVCKDCEKKLSKVIVPDKWKDGARNVTGGTDGGRATTYRNSLLQVRGATQR---FQAGVKTCRICKSKVAQDANYCQECAHHNGICAMCGKRVDDLRFDRR 98 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1216.1681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1216.1681.1 >prot_E-fasciculatus_F_contig1216.1681.1 ID=prot_E-fasciculatus_F_contig1216.1681.1|Name=mRNA_E-fasciculatus_F_contig1216.1681.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=105bp MVCEKCETKLSKVIVPDKWKDGARNTTGGDSGGRRVGHENMLLKHGAAKRback to top mRNA from alignment at E-fasciculatus_F_contig1216:16016..19224+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1216.1681.1 ID=mRNA_E-fasciculatus_F_contig1216.1681.1|Name=mRNA_E-fasciculatus_F_contig1216.1681.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3209bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1216:16016..19224+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1216:16016..19224+ >mRNA_E-fasciculatus_F_contig1216.1681.1 ID=mRNA_E-fasciculatus_F_contig1216.1681.1|Name=mRNA_E-fasciculatus_F_contig1216.1681.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=630bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1216:16016..19224+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |