mRNA_E-fasciculatus_F_contig1216.1680.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1216.1680.1
Unique NamemRNA_E-fasciculatus_F_contig1216.1680.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1216.1680.1 vs. uniprot
Match: D7FN67_ECTSI (Peptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN67_ECTSI)

HSP 1 Score: 1250 bits (3235), Expect = 0.000e+0
Identity = 640/682 (93.84%), Postives = 655/682 (96.04%), Query Frame = 2
Query:  170 MNFSKGVARASSSLRLGASRSTCSSHGTSIRGAAAVAAASGRCLGVRGGANRPLHATVPAAETPTSDTAAEEEASPVVSSLQAWMRKENMDCFIVPSDDPHLSEYASECFNRRAFVSGFTGSAGTAVVLKDEALLWTDGRYHLQADQQLGKGWRLMKAGKPSVPTIQEFLAKQLPTKSRVGIDPFVHSASSVKALEKASAKELGAAGISVAAIDHAGDDNPVDKIWGEARPPAPQSLVRIHNMEYAGETVKDKLAKIRKTMLEEKADVFVSGLLDEVAYILNIRGEDVAHSPVAIAYLLVTETGAIVFIDEAKMSTEVEAELKEHGVEVHRYEEALDAVRALAKQGKKVWIDPERVNFAFANVVGEDDLIAKPSPVSMAKGIKNTPELEGMRAAHVRDGVAMVLALSKLERDVAAGQVITEVDVDQRATAARSQQDKFVDLSFPTIAGENSNGAIIHYSAAPGSCHTVGPESMLLLDSGAQYEDGTTDVTRTMHFGEPTAEQKEAYTRVLQGHIGLATAQFPDGTPGFMIDAFARRHLWDAGLDYQHGTGHGVGAALNVHEGPHSISSRTANTTPLEPGMIVSNEPGYYKPGSFGVRIENLLEIVDSGISNETLGRRFYSFAPLTFIPMQKKLLDQTLLTSKELDWLDEYHEMVWTKLHKLVEDEEALAWLKEATAPVVRQP 2215
            MNFSKGVAR SSSLRLG SR+ CSSHGT+IRGAAAVAA SGRCLGVRGGANR LHATVPAAETPTSDTAAE+EASPV+SSLQAWMRKENMDCFIVPSDDPHLSEYASECFNRRAFVSGFTGSAGTAV+LKDEALLWTDGRYHLQADQQLGKGWRLMKAGKPSVPTIQEFLAK LPT+SRV IDPFVHSASSVKALEK    ELGAAGISVAAIDHAGD NPVDKIWGE RP  P+S VRIH M YAGETVKDKLAKIRK+MLEEKADVFVSGLLDEVAYILNIRG+DVAHSPVAIAYLLVTE GA VFIDEAKMSTEVEAE+KEHGVEVH YEEAL+AVR LAKQGKKVWIDPERVNFAFANVVGEDDLIAKPSPVSMAKGIKN PELEGMRAAHVRDGVAMVLALS+LERDVAAGQVITEVD+DQRAT ARSQQDKFVDLSFPTIAGENSNGAIIHYSA P SCHTVG ESMLLLDSGAQYEDGTTDVTRTMHFGEPTAEQKEAYTRVLQGHIGLATAQFPDGTPGFMIDAFARRHLWDAGLDYQHGTGHGVGAALNVHEGPHSISSRTANTTPLEPGMIVSNEPGYYKPGSFGVRIENLLEIVDSGISNETLGRRFYSFAPLTFIPMQKKLLDQTLLTSKELDWLDEYHE+VWTKLHKLV+DEEALAWLKEATAPVVRQP
Sbjct:    1 MNFSKGVARVSSSLRLGGSRAKCSSHGTTIRGAAAVAAVSGRCLGVRGGANRRLHATVPAAETPTSDTAAEKEASPVLSSLQAWMRKENMDCFIVPSDDPHLSEYASECFNRRAFVSGFTGSAGTAVILKDEALLWTDGRYHLQADQQLGKGWRLMKAGKPSVPTIQEFLAKHLPTQSRVAIDPFVHSASSVKALEK----ELGAAGISVAAIDHAGDKNPVDKIWGETRPAPPKSPVRIHKMAYAGETVKDKLAKIRKSMLEEKADVFVSGLLDEVAYILNIRGDDVAHSPVAIAYLLVTENGATVFIDEAKMSTEVEAEMKEHGVEVHGYEEALEAVRTLAKQGKKVWIDPERVNFAFANVVGEDDLIAKPSPVSMAKGIKNAPELEGMRAAHVRDGVAMVLALSRLERDVAAGQVITEVDIDQRATTARSQQDKFVDLSFPTIAGENSNGAIIHYSATPDSCHTVGRESMLLLDSGAQYEDGTTDVTRTMHFGEPTAEQKEAYTRVLQGHIGLATAQFPDGTPGFMIDAFARRHLWDAGLDYQHGTGHGVGAALNVHEGPHSISSRTANTTPLEPGMIVSNEPGYYKPGSFGVRIENLLEIVDSGISNETLGRRFYSFAPLTFIPMQKKLLDQTLLTSKELDWLDEYHEVVWTKLHKLVKDEEALAWLKEATAPVVRQP 678          
BLAST of mRNA_E-fasciculatus_F_contig1216.1680.1 vs. uniprot
Match: A0A835ZE52_9STRA (Peptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE52_9STRA)

HSP 1 Score: 675 bits (1742), Expect = 1.340e-231
Identity = 355/635 (55.91%), Postives = 441/635 (69.45%), Query Frame = 2
Query:  329 LHATVPAAETPTSDTAAEEEASPV------VSSLQAWMRKENMDCFIVPSDDPHLSEYASECFNRRAFVSGFTGSAGTAVVLKDEALLWTDGRYHLQADQQLGKGWRLMKAGKPSVPTIQEFLAKQLPTKSRVGIDPFVHSASSVKALEKASAKELGAAGISVAAIDHAGDDNPVDKIWGEARPPAPQSLVRIHNMEYAGETVKDKLAKIRKTMLEEKADVFVSGLLDEVAYILNIRGEDVAHSPVAIAYLLVTETGAIVFIDEAKMSTEVEAELKEHGVEVHRYEEALDAVRALAKQGKKVWIDPERVNFAFANVVGEDDLIAKPSPVSMAKGIKNTPELEGMRAAHVRDGVAMVLALSKLERDVAAGQVITEVDVDQ-RATAARSQQDKFVDLSFPTIAGENSNGAIIHYSAAPGSCHTVGPESMLLLDSGAQYEDGTTDVTRTMHFGEPTAEQKEAYTRVLQGHIGLATAQFPDGTPGFMIDAFARRHLWDAGLDYQHGTGHGVGAALNVHEGPHSISSRTANTTPLEPGMIVSNEPGYYKPGSFGVRIENLLEIVDSGISNETLGRRFYSFAPLTFIPMQKKLLDQTLLTSKELDWLDEYHEMVWTKLHKLV-EDEEALAWLKEATAPVVR 2209
            L ATV   ET T++      A+P       ++ L+  M    +D FIVPSDDPHLSEY++ CFNRR F++GF GSAGTAV+ + +ALLWTDGRY LQA+++LG  W LM+AG+P  PTIQ +LA  +    RVG+DP VHSA+    L      ELG AG+S++ +    D NPVD++WGEARPP P   +R+H ++YAGE+V+ KL K+R  +   KA   V   LDEVAY+LN+RG DVAH PVAIAY LVT   A +FID AK+  +V A L   GV V  Y +A+ AV ALA+ G +VW+DP RVN A    V     + + +P+SMAK +KN  EL GMRAAHVRDG A+   L  LE +V  G+ ++EV+VD+  +T  R+ +  F+DLSFPTIAG  +NGA+IHY A PG+C  V    M LLDSGAQYEDGTTDVTRTMHFG PTA Q+ AYT VL+GHIG+ T  FP+GTPG  IDAFARR LW AGLDY HGTGHGVGA+LNVHEGPHSIS R  N TPL+PGMIVSNEPGYY  G FG+RIENLLEI  +G+ N+ L R FY+F PLT +P+QK L+D  L+T +ELDWLD YH  VW ++   V ED  A  WL+ AT P+ R
Sbjct:   16 LSATV---ETKTAEAGGSSSAAPSAAVDPKLNKLRELMAASGVDAFIVPSDDPHLSEYSATCFNRREFITGFKGSAGTAVITQTKALLWTDGRYFLQAEKELGPDWTLMRAGQPGTPTIQAWLAGNVAEGGRVGVDPLVHSATFASELSA----ELGKAGVSLSPLSPQ-DPNPVDQVWGEARPPLPDGPLRVHPLKYAGESVEAKLEKVRAELARAKAAALVVCALDEVAYLLNVRGCDVAHCPVAIAYALVTRDAATLFIDAAKLPDDVRAHLTAAGVAVRAYADAVPAVAALAEGGARVWVDPARVNSAAWGAVPAAQRVTEATPLSMAKALKNEAELAGMRAAHVRDGAALSEFLCWLEGEVRGGRRVSEVEVDEVLSTRFRAARPLFLDLSFPTIAGAGANGAVIHYRAEPGACGAVDDTVMFLLDSGAQYEDGTTDVTRTMHFGAPTAAQRRAYTLVLKGHIGIDTCVFPEGTPGCAIDAFARRALWAAGLDYAHGTGHGVGASLNVHEGPHSISPRPGNATPLKPGMIVSNEPGYYLAGEFGIRIENLLEIAPAGMRNDALARDFYAFRPLTLVPIQKALIDAALMTPEELDWLDAYHARVWEEVALHVSEDGGARDWLRRATEPIQR 642          
BLAST of mRNA_E-fasciculatus_F_contig1216.1680.1 vs. uniprot
Match: A0A7S0D2C1_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D2C1_MICPS)

HSP 1 Score: 594 bits (1531), Expect = 7.350e-200
Identity = 307/630 (48.73%), Postives = 416/630 (66.03%), Query Frame = 2
Query:  401 VSSLQAWMRKENMDCFIVPSDDPHLSEYASECFNRRAFVSGFTGSAGTAVVLKDEALLWTDGRYHLQADQQLGKGWRLMKAGKPSVPTIQEFLAKQLPTKSRVGIDPFVHSASSVKALEKASAKELGAAGISVAAIDHAGDDNPVDKIWGEARPPAPQSLVRIHNMEYAGETVKDKLAKIRKTMLEEKADVFVSGLLDEVAYILNIRGEDVAHSPVAIAYLLVTETGAIVFIDEAKMSTEVEAELKEHGVEVHRYEEALDAVRALAKQGKKVWIDPERVNFAFANVVGEDDLIAKPS---------------------------PVSMAKGIKNTPELEGMRAAHVRDGVAMVLALSKLERDVAAGQVITEVDVDQRATAARSQQDKFVDLSFPTIAGENSNGAIIHYSAAPGSCHTVGPESMLLLDSGAQYEDGTTDVTRTMHFGEPTAEQKEAYTRVLQGHIGLATAQFPDGTPGFMIDAFARRHLWDAGLDYQHGTGHGVGAALNVHEGPHSISSRTANTTPLEPGMIVSNEPGYYK--PGSFGVRIENLLEIVDSGISNETLGRRFYSFAPLTFIPMQKKLLDQTLLTSKELDWLDEYHEMVWTKLHKLVEDEEALAWLKEATAPV 2203
            +++L+A M   ++D F+VPS DPH SEY   CF RRA++SGFTGSAGTAVV   EALLWTDGRY LQA Q+L   W LMK G+P VP  +++LA++LP+ ++VG+D  VHS +  +A+    AK     G+++  +      NPVD+ WG+ARPP P + +R H  E+AG+T  +K+A+ R  + E+ AD  V   LDEVA++ N+RG D+  +PVA+ Y L+T+  A +++D++K+S E+ AELK+ GV+V +YE  +  V+ALA  GK +W+DPE+V+ A      ED     PS                           P+ +AK IKN  E+ GM  AH+RDGVAM      L++    G+  +E ++ +   + R++Q  F + SF TIAGE  +GAIIHY A+  S   VG +S+LL DSG QYE GTTDVTRT H G PTA QK+AYTRVLQGHI LA+A+FP+ T GF++D FAR HLW  GLDY+HGTGHGVGAALNVHEGP S+S R  N TPL PGM++SNEPGYY+  P  FG+RIENLL + ++  S+    +++  F PLT IP+QKKL+D +L+  K++ WL+EYH  VW K+   VEDEE   WLK+AT PV
Sbjct:    9 LAALRARMAAASVDAFVVPSQDPHFSEYVPTCFERRAWISGFTGSAGTAVVTAREALLWTDGRYFLQASQELSSEWTLMKGGQPGVPEPKQWLAEKLPSGAKVGVDASVHSLNEARAMRDVFAKH----GVALECLA----TNPVDEAWGDARPPFPTAPLRAHPAEWAGKTAAEKIAQCRAALAEKDADALVVSPLDEVAWLFNVRGNDLDFNPVALGYGLITQKNATLYVDQSKVSDELRAELKKEGVDVAKYEACVSDVKALAASGKSLWVDPEKVSAALV-AAAEDAAADAPSSAKKAKTEAGGEKKTRGAKKAVVEGASPIPLAKAIKNDAEIAGMVEAHLRDGVAMASFWCWLDKQAREGKTHSEFEIGEVVRSFRAKQFGFSEESFATIAGEGPHGAIIHYRASRESARVVGSDSLLLCDSGGQYECGTTDVTRTHHTGSPTAFQKDAYTRVLQGHIALASARFPEDTSGFVLDVFARSHLWAEGLDYRHGTGHGVGAALNVHEGPQSVSPRFGNPTPLRPGMVLSNEPGYYEDGPDGFGIRIENLLVVREAATSHAFGDKKYLEFYPLTLIPIQKKLIDWSLMAPKDVAWLNEYHAQVWEKVSPRVEDEETKTWLKDATKPV 629          
BLAST of mRNA_E-fasciculatus_F_contig1216.1680.1 vs. uniprot
Match: A0A4D9D762_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D762_9STRA)

HSP 1 Score: 594 bits (1532), Expect = 5.720e-199
Identity = 327/686 (47.67%), Postives = 435/686 (63.41%), Query Frame = 2
Query:  326 PLHATVPAAETPTSDTAAEEEASPVVSSLQAWMRKENMDCFIVPSDDPHLSEYASECFNRRAFVSGFTGSAGTAVVLKDEALLWTDGRYHLQADQQLGKGWRLMKAGKPSVPTIQEFLAKQLPTKSRVGIDPFVHSASSVKALEKASAKELGAAGISVAAIDHAGDDNPVDKIWGEA--RPPAPQSLVRIHNMEYAGETVKDKLAKIRKTMLEEKADVFVSGLLDEVAYILNIRGEDVAHSPVAIAYLLVTETGA---------------------IVFIDEAKMSTEVEAEL-KEHGVEVHRYEEALDAVRALAKQGKKVWIDPERVNFAF------------------------------ANVVGEDDLIAKPSPVSMAKGIKNTPELEGMRAAHVRDGVAMVLALSKLERDVAAGQVITEVDVDQRATAARSQQDKFVDLSFPTIAGENSNGAIIHYSAAPGSCHTVGPESMLLLDSGAQYEDGTTDVTRTMHFGEPTAEQKEAYTRVLQGHIGLATAQFPDGTPGFMIDAFARRHLWDAGLDYQHGTGHGVGAALNVHEGPHSISSRTANTTPLEPGMIVSNEPGYYKPGSFGVRIENLLEIVD----SGISNET-LGRRFYSFAPLTFIPMQKKLLDQTLLTSKELDWLDEYHEMVWTKLHKLVEDEEALAWLKEATAPVV 2206
            P  A  P A TP   TAA       ++ ++  + K  +  FIVPS DPHLSEY ++ F RRAF+SGF GSAGTAVV   +ALLWTDGRYHLQA+QQLG  W LM+ G+  VP++  +L ++L  ++ VG+DP VH    V+ L +A    LG+  + V  ++ A + NP+D  W  A  RPPAPQ+ VRIH + +AGE V DK+ ++ K M +E ADV V+G LDEVA++LNIRGEDV + P+ +AY ++   GA                     IVF+++AK+     A L K+   E+  Y E    +      G+K+W+DP++ N+A                                 V  E  L+  P+P+++ K +KN  ELEGMRAAH+RDG A V  L+ LE+++    V +EV++D   T  RS+++KF+ +SF TIAG   NGAIIHY A P +C  +  E+MLLLDSG QYEDGTTDVTRT+HFGEPT ++KEA+TRVLQGHIG+ TA FP+GTPGF++DA+ARR LW AG DY HGTGHGVGAALNVHEGPH IS   AN TPL+ GMIVSNEPGYY  G FG+RIENLL +V+     G+  +    R+F  F  LT+IP+ K+L+ Q LL+ +E+ W+D YH  VW ++  L+   EA AWL+EATAP+V
Sbjct:   38 PAKAVSPPATTPQQRTAA-------LTQVRDELSKRGLAAFIVPSGDPHLSEYPADHFCRRAFLSGFDGSAGTAVVTPTQALLWTDGRYHLQAEQQLGPEWTLMREGQKGVPSLTAYLQEELSAQAVVGLDPTVHPVKFVQNLAQA----LGSKKVQVQPLNVA-ETNPIDLAWRTAGGRPPAPQAPVRIHPLAFAGEAVSDKVKRLSKEMAKEGADVLVAGTLDEVAWLLNIRGEDVPNCPLPVAYAVLEREGASQPGGGGVDSGNGGKDKSARVIVFVEDAKLGPTARAHLEKDCRAEIRPYAEIFSYLSGAHASGRKIWLDPDKSNYALLRAASMPPEEGKVTYEKVSGSTGDGALAAIGKVPSEPSLLLHPTPITLFKAVKNEEELEGMRAAHLRDGAAEVEFLAWLEKEIQTRSV-SEVEIDHVLTGFRSRREKFLGVSFDTIAGSGPNGAIIHYRAMPETCGEMTKETMLLLDSGGQYEDGTTDVTRTVHFGEPTEDEKEAFTRVLQGHIGVDTAVFPEGTPGFVLDAYARRSLWQAGSDYAHGTGHGVGAALNVHEGPHGISFNFANRTPLQAGMIVSNEPGYYASGVFGIRIENLLIVVERAGLGGVGGQDPRQRKFLGFERLTYIPISKRLIKQDLLSPEEVKWVDRYHAEVWERISPLLTSSEAEAWLREATAPMV 710          
BLAST of mRNA_E-fasciculatus_F_contig1216.1680.1 vs. uniprot
Match: C1E874_MICCC (Peptidase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E874_MICCC)

HSP 1 Score: 581 bits (1497), Expect = 6.320e-195
Identity = 308/623 (49.44%), Postives = 405/623 (65.01%), Query Frame = 2
Query:  395 PVVSSLQAWMRKENMDCFIVPSDDPHLSEYASECFNRRAFVSGFTGSAGTAVVLKDEALLWTDGRYHLQADQQLGKGWRLMKAGKPSVPTIQEFLAKQLPTKSRVGIDPFVHSASSVKALEKASAKELGAAGISVAAIDHAGDDNPVDKIWGEARPPAPQSLVRIHNMEYAGETVKDKLAKIRKTMLEEKADVFVSGLLDEVAYILNIRGEDVAHSPVAIAYLLVTETGAIVFIDEAKMSTEVEAELKEHGVEVHRYEEALDAVRALAKQGKKVWIDPERVNFAFANVVGEDDLIAKP--------------------SPVSMAKGIKNTPELEGMRAAHVRDGVAMVLALSKLERDVAAGQVITEVDVDQRATAARSQQDKFVDLSFPTIAGENSNGAIIHYSAAPGSCHTVGPESMLLLDSGAQYEDGTTDVTRTMHFGEPTAEQKEAYTRVLQGHIGLATAQFPDGTPGFMIDAFARRHLWDAGLDYQHGTGHGVGAALNVHEGPHSISSRTANTTPLEPGMIVSNEPGYYKPGSFGVRIENLLEIVDSGISNETLGRRFYSFAPLTFIPMQKKLLDQTLLTSKELDWLDEYHEMVWTKLHKLVEDEEALAWLKEATAPV 2203
            P + +++A M+   +D FIVPS DPH SEY   CF RR F+SGFTGSAGTA+V  DEALLWTDGRY LQA+Q+LG  W LM+ G+P VP   ++LA ++   S+VG+DP VHS S  +AL  A    L AAG ++  +D     NPVD +W   RP  P + +R+H  E++G++V DK+  IR  + E K+DV V   LDEVA++ N+RG D+ ++PV + Y LV++  A +++D  K++ EV A L E GV V  Y++    +RA A  GK +WID ++V+ A      E    A P                    SP+ +AK +KN  EL GM  AH+RDGVAM      L+   A G+   E ++ +  +  R++Q  F + SF TIAGE  +GAIIHY A+  S   VG  S+LL DSG QY+ GTTDVTRT H G PT  QK AYTRVLQGHIGL TA FP  T GF++DAFARRHLW+AGLDY+HGTGHGVGAALNVHEGP SIS R  N T L PGMI+SNEPGYY+ G FG+RIENLL + ++  S+    +++ +F  LT IP+QKKL+D +L++  E+ WL++YH +VW K+   V DE+  AWLKEA APV
Sbjct:    5 PKLVAMRAAMKAAGVDAFIVPSQDPHFSEYVPTCFERRMFISGFTGSAGTALVTHDEALLWTDGRYFLQAEQELGPEWTLMRGGQPGVPEPSKWLADKMAKGSKVGVDPAVHSLSEARALRSA----LEAAGSALVTLDV----NPVDTVWDADRPAFPTAPLRVHKAEFSGKSVADKVDFIRAKLDENKSDVLVVSPLDEVAWLFNVRGGDLDYNPVTLGYGLVSKDEACLYVDLGKVTNEVRAHLDEAGVVVKPYDDCAGDMRAAAAAGKTLWIDADKVSVALVEAAEEAAAAAGPAEKKAKTENDDAKKTIKEGVSPIPLAKAVKNEAELAGMLEAHLRDGVAMASFWCWLDEQAAQGKEWDEYEIGEWVSKFRAEQPGFSEESFATIAGEGPHGAIIHYRASVESARKVGQNSLLLCDSGGQYDCGTTDVTRTHHLGTPTDHQKNAYTRVLQGHIGLTTAVFPQDTSGFVLDAFARRHLWEAGLDYRHGTGHGVGAALNVHEGPQSISPRFGNMTGLVPGMILSNEPGYYEDGGFGIRIENLLVVREAKTSHNFGDKKYLTFDYLTHIPIQKKLIDFSLMSGAEVAWLNQYHAVVWEKVSPRVTDEKVKAWLKEACAPV 619          
BLAST of mRNA_E-fasciculatus_F_contig1216.1680.1 vs. uniprot
Match: A0A2P6TKE3_CHLSO (Putative Xaa-Pro aminopeptidase P n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TKE3_CHLSO)

HSP 1 Score: 582 bits (1501), Expect = 5.080e-194
Identity = 312/646 (48.30%), Postives = 418/646 (64.71%), Query Frame = 2
Query:  437 MDCFIVPSDDPHLSEYASECFNRRAFVSGFTGSAGTAVVLKDEALLWTDGRYHLQADQQLGKGWRLMKAGKPSVPTIQEFLAKQLPTKSRVGIDPFVHSASSVKALEKASAKELGAAGISVAAIDHAGDDNPVDKIWGEARPPAPQSLVRIHNMEYAGETVKDKLAKIRKTMLEEKADVFVSGLLDEVAYILNIRGEDVAHSPVAIAYLLVTETGAIVFIDEAKMSTEVEAELKE---------------HGVEVHRYEEALDAVRALAKQGKKVWIDPERVNFAF--------------ANVVGE---------------------------DDLIAKPSPVSMAKGIKNTPELEGMRAAHVRDGVAMVLALSKLERDVAAGQVITEVDVDQRATAARSQQDKFVDLSFPTIAGENSNGAIIHYSAAPGSCHTVGPESMLLLDSGAQYEDGTTDVTRTMHFGEPTAEQKEAYTRVLQGHIGLATAQFPDGTPGFMIDAFARRHLWDAGLDYQHGTGHGVGAALNVHEGPHSISSRTANTTPLEPGMIVSNEPGYYKPGSFGVRIENLLEIVDSGISNETLGRRFYSFAPLTFIPMQKKLLDQTLLTSKELDWLDEYHEMVWTKLH-KLVEDEEALAWLKEATAPV 2203
            +  FIVPS+DPH+SEY  +C  RRAF+SGF GSAGTAVV  D ALLWTDGRY LQA+QQLG  W LM+   P VP +Q++LA+ LP  +RVGIDP+VH+   V+A EK   + L A+G ++ A++ A   N VD +WG  RP AP + +R+H +E+AG++V DK+A +++ + EE A   +  +LDEVA++ N+RG DVA++PV ++Y +VT  GA +++D  K++ EV A L E                GV V  Y   L  V+A+A  G K+W+DP RV++A               A   G                            D L+ KPSPV++AK +KN  EL GMR AH+RDG A+V  L  LE+ +A+GQ +TEV++D+  TA R+ Q  F++ SFPTIAG   NGAIIHY A PG+C TV   ++LLLDSGAQ++ GTTD+TRTMHFG P+A QK  +T VLQGHIGL TA +P+GTPG  +D  AR  LW  GL+Y+HGTGHGVGAALNVHEGP SIS+R   T PL   M+ SNEPGYY+ G+FG+RIENL  +V++       G  + S   LT  P+QKK++ + +L+ KE+ W+D YH+ VW  L  +L  +EE LAWL+EATAP+
Sbjct:   94 VQAFIVPSEDPHMSEYPPDCDARRAFISGFDGSAGTAVVTTDAALLWTDGRYFLQAEQQLGPDWTLMRDSTPGVPPLQDWLAESLPAGARVGIDPWVHT---VEAAEKLR-RRLKASGKTLVALEGA---NLVDGVWGADRPAAPSAPLRVHALEWAGQSVADKIAGLQRQLAEEGAGALLVTMLDEVAWLFNLRGGDVAYNPVFVSYGVVTGEGATLYVDTQKVTPEVSAHLSEAGSWRCAVVXXXXXXXGVAVKEYTALLGDVQAMAAAGTKIWLDPSRVSYALKHAALQAAAGASAKAGAAGSRKRARGANGSPAAAAAEESGPDGGAPADILLEKPSPVTLAKSVKNAAELAGMREAHLRDGAALVRFLCWLEQTIASGQTLTEVEIDEHLTAKRAAQPGFIEPSFPTIAGAGPNGAIIHYRAQPGTCRTVDASTLLLLDSGAQFDCGTTDITRTMHFGSPSAHQKACFTAVLQGHIGLDTAVWPEGTPGCALDTLARTPLWALGLNYRHGTGHGVGAALNVHEGPQSISTRYWVTQPLLEHMVCSNEPGYYEDGAFGIRIENLFAVVEANTEFRYGGLSYLSCERLTLCPIQKKMIAKEVLSQKEIAWVDAYHKQVWEALSPRLAGEEEELAWLREATAPL 732          
BLAST of mRNA_E-fasciculatus_F_contig1216.1680.1 vs. uniprot
Match: A0A2P6V769_9CHLO (Putative Xaa-Pro aminopeptidase P n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V769_9CHLO)

HSP 1 Score: 579 bits (1492), Expect = 9.110e-194
Identity = 307/663 (46.30%), Postives = 422/663 (63.65%), Query Frame = 2
Query:  329 LHATVPAAETPTSDTAAEEEASPVVSSLQAWMRKENMDCFIVPSDDPHLSEYASECFNRRAFVSGFTGSAGTAVVLKDEALLWTDGRYHLQADQQLGKGWRLMKAGKPSVPTIQEFLAKQLPTKSRVGIDPFVHSASSVKALEKASAKELGAAGISVAAIDHAGDDNPVDKIWGEARPPAPQSLVRIHNMEYAGETVKDKLAKIRKTMLEEKADVFVSGLLDEVAYILNIRGEDVAHSPVAIAYLLVTETGAIVFIDEAKMSTEVEAELKEHGVEVHRYEEALDAVRALAKQGKKVWIDPERVNFAFANVV---------------------------------GEDD----LIAKPSPVSMAKGIKNTPELEGMRAAHVRDGVAMVLALSKLERDVAAGQVITEVDVDQRATAARSQQDKFVDLSFPTIAGENSNGAIIHYSAAPGSCHTVGPESMLLLDSGAQYEDGTTDVTRTMHFGEPTAEQKEAYTRVLQGHIGLATAQFPDGTPGFMIDAFARRHLWDAGLDYQHGTGHGVGAALNVHEGPHSISSRTANTTPLEPGMIVSNEPGYYKPGSFGVRIENLLEIVDSGISNETLGRRFYSFAPLTFIPMQKKLLDQTLLTSKELDWLDEYHEMVWTKLH-KLVEDEEALAWLKEATAPV 2203
            + A  PAA  P +    +E+ + + +++        +  FIVPS+DPH+SEY  EC  RRA++SGF GSAGTAVV  D ALLWTDGRY LQA  QLG  W LM+ G P+ P + ++LA+ L   +RVGIDPF H+   ++A EK   + L AA +S+  ++     NPVD +WG  RP    + +R+H ME+AG++V DKLA +R+ + E  A   +  +LDEVA++ N+RG DV ++PV ++Y +VT  GA +++D AK++ E  A L E GV    Y   L  V+A+A  G K+W+DP RV++A                                      GE      ++ K SPV++AK +KN  EL G+R AH+RDG A+   L  L++ +A+G+ +TEV++D+  TA R+ Q  FV+ SFPTIAG   NGAIIHY A PG+C +V   S+LLLDSGAQY+ GTTD+TRTMHFG+P+  Q+  +TRVLQGHIGL T  +P+GTPG  ID  AR  LW  GL+Y+HGTGHGVGAALNVHEGP SISSR  NT PL   M+ SNEPGYY+ G+FG+RIENL  +V++       G+ FY    +T  P+QKK++++ LL+ KE +WL+ YH  VW  +  +L  +EE LAWL+EAT+P+
Sbjct:    1 MSAVAPAAAAPAAPAGGDEKLARMRAAMAQADGGRGVHAFIVPSEDPHMSEYPPECDARRAYISGFDGSAGTAVVCTDAALLWTDGRYFLQAGAQLGSEWTLMRHGTPTCPEVHDWLAEHLHEGARVGIDPFAHT---IEAAEKLR-RRLRAASMSLVPLE----PNPVDAVWGVERPSPADAPLRVHAMEWAGQSVADKLAGLRQQLAEAGAGALLVTMLDEVAWLFNLRGGDVPYNPVFVSYGVVTAEGATLYVDLAKVTPEAAAHLAEAGVATKEYSALLGDVKAMAAAGTKLWMDPARVSYALKQAALAAAAEAXXXXXXXXXXXXXXXXXXXXXXXGSEGEAAPACVILEKSSPVTLAKSVKNAAELAGLREAHLRDGAALARFLCWLDKTIASGKTLTEVEIDEHLTARRAAQPGFVEPSFPTIAGAGPNGAIIHYRAQPGTCRSVDASSLLLLDSGAQYDCGTTDITRTMHFGQPSEHQRACFTRVLQGHIGLDTVVWPEGTPGCAIDVLARVPLWSMGLNYRHGTGHGVGAALNVHEGPQSISSRFWNTQPLLEHMVCSNEPGYYEDGAFGIRIENLFVVVEANTEFRFGGQSFYGCDAITLCPIQKKMINKELLSKKEFEWLNAYHARVWASISPRLQGEEEELAWLREATSPL 655          
BLAST of mRNA_E-fasciculatus_F_contig1216.1680.1 vs. uniprot
Match: A0A2G5CHK6_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5CHK6_AQUCA)

HSP 1 Score: 580 bits (1495), Expect = 1.980e-193
Identity = 303/619 (48.95%), Postives = 402/619 (64.94%), Query Frame = 2
Query:  437 MDCFIVPSDDPHLSEYASECFNRRAFVSGFTGSAGTAVVLKDEALLWTDGRYHLQADQQLGKGWRLMKAGKPSVPTIQEFLAKQLPTKSRVGIDPFVHSASSVKALEKASAKELGAAGISVAAIDHAGDDNPVDKIWGEARPPAPQSLVRIHNMEYAGETVKDKLAKIRKTMLEEKADVFVSGLLDEVAYILNIRGEDVAHSPVAIAYLLVTETGAIVFIDEAKMSTEVEAELKEHGVEVHRYEEALDAVRALAKQGKKVWIDPERVNFAFANVV-----------------GEDDLI----AKP------SPVSMAKGIKNTPELEGMRAAHVRDGVAMVLALSKLERDVAAGQVITEVDVDQRATAARSQQDKFVDLSFPTIAGENSNGAIIHYSAAPGSCHTVGPESMLLLDSGAQYEDGTTDVTRTMHFGEPTAEQKEAYTRVLQGHIGLATAQFPDGTPGFMIDAFARRHLWDAGLDYQHGTGHGVGAALNVHEGPHSISSRTANTTPLEPGMIVSNEPGYYKPGSFGVRIENLLEIVDSGISNETLGRRFYSFAPLTFIPMQKKLLDQTLLTSKELDWLDEYHEMVWTKLHKLVEDEEALAWLKEATAPVVRQ 2212
            +D +I+PS D H SE+ +EC+ RR+++SGFTGSAGTAVV KD+A LWTDGRY LQA++QL   W LM+AG   VPT  E+L   L    R+GIDPF+ S+ + + L+   +K+          + +    N VD+IW E RP  P   VR+H+++YAG  VK KL+ +R  +    A   V  +LDEVA++LN+RG DV HSPV  AYL+V   GA +FID +K++ EV A LK+ GV++  YE  L  + +LA QG ++W D   VN A  N                   G  + I    A P      SP+SMAK +KN  ELEGM+++H+RD  A+    + LE +++   V+TEVDV  +    R +Q  F+D SF TI+G  +NGA+IHY   P SC  V  E++ LLDSGAQY DGTTD+TRT+HFGEPT+ QKE +TRVLQGHI L  A FP+ TPGF++DAFAR  LW  GLDY+HGTGHGVGAALNVHEGPHSIS R  N TPL+ GM+VSNEPGYY+  SFG+RIENL+ + +    N   G  +  F  LT++P+Q KL+D TLL++ E++WL+EYH  VW K+  L+ED+ A  WL   T P+V+Q
Sbjct:   94 IDAYIIPSQDAHQSEFIAECYMRRSYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQLTPRWILMRAGNYGVPTTAEWLNDVLAPGCRIGIDPFLFSSDAAEELKGEISKKNHE-------LVYLHSINLVDEIWKETRPEPPMKPVRVHDLKYAGVDVKSKLSSLRSELRVAGASAIVISMLDEVAWLLNLRGNDVPHSPVMYAYLIVEIDGAKLFIDNSKVNPEVMAHLKDSGVQLRPYEAILSEIESLAAQGAQIWFDTSSVNAAIVNTYRSACDQYLRKVASKNKSGASERINGRTAGPTGVYRVSPISMAKAVKNKAELEGMQSSHLRDAAALSQFWAWLEEEISKNVVLTEVDVADKLLEFREKQYGFMDTSFDTISGSGANGAVIHYKPEPESCSVVDAENLFLLDSGAQYIDGTTDITRTVHFGEPTSRQKECFTRVLQGHIALDQAVFPENTPGFVLDAFARSSLWKVGLDYRHGTGHGVGAALNVHEGPHSISFRFGNLTPLQKGMVVSNEPGYYEDHSFGIRIENLVYVKEVNTPNRYGGIAYLGFEKLTYVPIQSKLIDLTLLSTNEVNWLNEYHSQVWEKVSPLLEDDSASQWLWNNTRPLVKQ 705          
BLAST of mRNA_E-fasciculatus_F_contig1216.1680.1 vs. uniprot
Match: A0A4D8ZSM4_SALSN (Xaa-Pro aminopeptidase n=3 Tax=Salvia TaxID=21880 RepID=A0A4D8ZSM4_SALSN)

HSP 1 Score: 578 bits (1490), Expect = 1.080e-192
Identity = 302/621 (48.63%), Postives = 401/621 (64.57%), Query Frame = 2
Query:  434 NMDCFIVPSDDPHLSEYASECFNRRAFVSGFTGSAGTAVVLKDEALLWTDGRYHLQADQQLGKGWRLMKAGKPSVPTIQEFLAKQLPTKSRVGIDPFVHSASSVKALEKASAKELGAAGISVAAIDHAGDDNPVDKIWGEARPPAPQSLVRIHNMEYAGETVKDKLAKIRKTMLEEKADVFVSGLLDEVAYILNIRGEDVAHSPVAIAYLLVTETGAIVFIDEAKMSTEVEAELKEHGVEVHRYEEALDAVRALAKQGKKVWIDPERVNFAFANVVGE-----------------------------DDLIAKPSPVSMAKGIKNTPELEGMRAAHVRDGVAMVLALSKLERDVAAGQVITEVDVDQRATAARSQQDKFVDLSFPTIAGENSNGAIIHYSAAPGSCHTVGPESMLLLDSGAQYEDGTTDVTRTMHFGEPTAEQKEAYTRVLQGHIGLATAQFPDGTPGFMIDAFARRHLWDAGLDYQHGTGHGVGAALNVHEGPHSISSRTANTTPLEPGMIVSNEPGYYKPGSFGVRIENLLEIVDSGISNETLGRRFYSFAPLTFIPMQKKLLDQTLLTSKELDWLDEYHEMVWTKLHKLVEDEEALAWLKEATAPVVR 2209
            N+D +I+PS D H SE+ +EC+ RRA++SGFTGSAGTAVV KD+A LWTDGRY LQA+QQL  GW LM+AG   VPT  E+L   L   SRVGIDPF+ S+ S   L++A +++          +    D N VD+IW E+RP  P  LVR+H+++YAG  V  KL+ +R  +    +   V  +LDE+A++LN+RG D+ HSPV  AY++V   GA +FI++AK++ +V   LK  G+EV  YE  L  V +LA +G ++W+D   V+ A  N                                    + K SP+S AK IKN  ELEGMR +H+RD  AM    + LE ++ +G ++TEVDV  +    RS+QD F+D SF TI+G  +NGAIIHY   P  C  + PE + LLDSGAQY DGTTD+TRT+HFG+P++ +KE +TRVLQGHI L  A FPD  PGF++D+FAR  LW  GLDY+HGTGHGVGAALNVHEGP SIS R  N TPL  GM+VSNEPGYY+  +FG+RIENLL + ++   N   G  +  F  LTF+P+Q KL D +LL++ E+DWL++YH+ VW K+  LVE   A  WLK+ T PVV+
Sbjct:   96 NIDAYIIPSQDAHQSEFIAECYTRRAYISGFTGSAGTAVVTKDKAALWTDGRYFLQAEQQLHSGWILMRAGNLGVPTTSEWLNGILAPGSRVGIDPFLFSSDSADELKEAISQKNHE-------LVCVYDVNLVDEIWKESRPKPPNRLVRVHDLKYAGVDVSSKLSSLRSELSNADSSAIVISMLDEIAWLLNLRGSDIPHSPVMYAYIIVEIDGAKLFINDAKINPDVMDYLKNAGIEVRPYESILSEVESLAAKGARLWLDTSSVSVAIVNAFKSACDKYSSTSGNANKNTRAVANGPVTKSRGPAAVYKSSPISFAKAIKNEAELEGMRNSHLRDAAAMAQFWAWLEEEIGSGAILTEVDVADKLLEFRSRQDGFLDTSFDTISGSGANGAIIHYKPEPNKCSIIDPEKLFLLDSGAQYIDGTTDITRTVHFGQPSSWEKECFTRVLQGHIALDQAIFPDNYPGFVLDSFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRFGNMTPLLRGMVVSNEPGYYEDHAFGIRIENLLCVKEAHTPNCFGGVDYLGFEKLTFVPIQTKLCDLSLLSTTEIDWLNDYHKQVWEKVSPLVEG-SAYQWLKDNTRPVVK 708          
BLAST of mRNA_E-fasciculatus_F_contig1216.1680.1 vs. uniprot
Match: A0A6A1UPV9_9ROSI (Putative Xaa-Pro aminopeptidase P n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1UPV9_9ROSI)

HSP 1 Score: 577 bits (1488), Expect = 1.150e-192
Identity = 304/608 (50.00%), Postives = 396/608 (65.13%), Query Frame = 2
Query:  434 NMDCFIVPSDDPHLSEYASECFNRRAFVSGFTGSAGTAVVLKDEALLWTDGRYHLQADQQLGKGWRLMKAGKPSVPTIQEFLAKQLPTKSRVGIDPFVHSASSVKALEKASAKELGAAGISVAAIDHAGDDNPVDKIWGEARPPAPQSLVRIHNMEYAGETVKDKLAKIRKTMLEEKADVFVSGLLDEVAYILNIRGEDVAHSPVAIAYLLVTETGAIVFIDEAKMSTEVEAELKEHGVEVHRYEEALDAVRALAKQGKKVWIDPERVNFAFANV---------------VGEDDLIAKPSPVSMAKGIKNTPELEGMRAAHVRDGVAMVLALSKLERDVAAGQVITEVDVDQRATAARSQQDKFVDLSFPTIAGENSNGAIIHYSAAPGSCHTVGPESMLLLDSGAQYEDGTTDVTRTMHFGEPTAEQKEAYTRVLQGHIGLATAQFPDGTPGFMIDAFARRHLWDAGLDYQHGTGHGVGAALNVHEGPHSISSRTANTTPLEPGMIVSNEPGYYKPGSFGVRIENLLEIVDSGISNETLGRRFYSFAPLTFIPMQKKLLDQTLLTSKELDWLDEYHEMVWTKLHKLVEDEEALAWLKEATAPVVRQ 2212
            N+D FI+PS D H SE+ +EC+ RRA++SGFTGSAGTAVV KD+A+LWTDGRY LQA++QL   W LM+AG   VPT  E+L + L    RVGIDPF+ S+ + + L++A AK+          + +  D NPVD+IWGE+RP  P   +RIH+++Y+G  V  KL  +R  +++  +   V  +LDEVA++LN+RG DV HSPV  AYL+V   GA +FID +K+  EV   LK  G+E+  Y+  L  + +LA QG  +W+D   VN A  N                VG    + K SP+S+AK +KN  ELEGM+ +H+RDG A+    + LE  +     +TEV+V  +    RS+Q  F+D SF TI+   +NGAIIHY     SC  V  E + LLDSGAQY DGTTD+TRT+HFG PTA QKE +TRVLQGHI +  A FP+ TPGF++DAFAR  LW  GLDY+HGTGHGVGAALNVHEGP SIS R  N TPL  GMIVSNEPGYY+  SFG+RIENLL + +    N   G  +  F  LTF+P+Q KL+D +LL+  E+DWL+EYH  VW K+  L+ D  A  WL   T P+V+Q
Sbjct:   92 NIDAFIIPSQDAHQSEFIAECYMRRAYISGFTGSAGTAVVTKDKAVLWTDGRYFLQAEKQLSSSWILMRAGNLGVPTTIEWLNEVLAPGGRVGIDPFLFSSDAAEELKEAIAKKSHE-------LVYLYDLNPVDEIWGESRPKPPNKPIRIHDLKYSGLDVASKLTSLRSELVDSASSAIVISMLDEVAWLLNLRGSDVPHSPVMYAYLIVEIDGAKLFIDNSKVMPEVMNHLKNAGIELRPYDSILSEIESLAVQGTCLWLDTSSVNAAIVNTYKSACERCTTSNGHSVGHPG-VYKSSPISVAKAVKNYAELEGMQNSHLRDGAALAQFWAWLEDVIQKNVKLTEVEVADKLLEFRSKQAGFIDTSFDTISASGANGAIIHYKPETESCTLVDSEKLFLLDSGAQYIDGTTDITRTVHFGFPTARQKECFTRVLQGHIAIDQAVFPESTPGFVLDAFARSFLWKIGLDYRHGTGHGVGAALNVHEGPQSISFRYGNMTPLLKGMIVSNEPGYYEDHSFGIRIENLLYVTEVDTPNRFGGVSYLGFKKLTFVPIQSKLIDLSLLSISEIDWLNEYHSQVWEKVSPLL-DGSARQWLWNNTRPIVKQ 690          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1216.1680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN67_ECTSI0.000e+093.84Peptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN... [more]
A0A835ZE52_9STRA1.340e-23155.91Peptidase n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
A0A7S0D2C1_MICPS7.350e-20048.73Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A4D9D762_9STRA5.720e-19947.67Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
C1E874_MICCC6.320e-19549.44Peptidase n=1 Tax=Micromonas commoda (strain RCC29... [more]
A0A2P6TKE3_CHLSO5.080e-19448.30Putative Xaa-Pro aminopeptidase P n=1 Tax=Chlorell... [more]
A0A2P6V769_9CHLO9.110e-19446.30Putative Xaa-Pro aminopeptidase P n=1 Tax=Micracti... [more]
A0A2G5CHK6_AQUCA1.980e-19348.95Uncharacterized protein n=1 Tax=Aquilegia coerulea... [more]
A0A4D8ZSM4_SALSN1.080e-19248.63Xaa-Pro aminopeptidase n=3 Tax=Salvia TaxID=21880 ... [more]
A0A6A1UPV9_9ROSI1.150e-19250.00Putative Xaa-Pro aminopeptidase P n=1 Tax=Morella ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1216contigE-fasciculatus_F_contig1216:7637..14907 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1255.7
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FN67
KEGG koko:K01262
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.Belongs to the peptidase M24B family
EggNOG OGsCOG0006@1,KOG2413@2759
EC3.4.11.9
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionCreatinase/Aminopeptidase P, N-terminal
Ec32 orthologEc-06_008580.1
Exons15
Model size2693
Cds size2109
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927725.5871708-UTR-E-fasciculatus_F_contig1216:7636..77451622927725.5871708-UTR-E-fasciculatus_F_contig1216:7636..7745Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1216 7637..7745 +
1695995667.2702055-UTR-E-fasciculatus_F_contig1216:7636..77451695995667.2702055-UTR-E-fasciculatus_F_contig1216:7636..7745Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1216 7637..7745 +
1622927725.8600612-UTR-E-fasciculatus_F_contig1216:14432..149071622927725.8600612-UTR-E-fasciculatus_F_contig1216:14432..14907Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1216 14433..14907 +
1695995667.445224-UTR-E-fasciculatus_F_contig1216:14432..149071695995667.445224-UTR-E-fasciculatus_F_contig1216:14432..14907Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1216 14433..14907 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927725.6019537-CDS-E-fasciculatus_F_contig1216:7745..78201622927725.6019537-CDS-E-fasciculatus_F_contig1216:7745..7820Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 7746..7820 +
1695995667.2833493-CDS-E-fasciculatus_F_contig1216:7745..78201695995667.2833493-CDS-E-fasciculatus_F_contig1216:7745..7820Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 7746..7820 +
1622927725.6181233-CDS-E-fasciculatus_F_contig1216:9241..94391622927725.6181233-CDS-E-fasciculatus_F_contig1216:9241..9439Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 9242..9439 +
1695995667.2943268-CDS-E-fasciculatus_F_contig1216:9241..94391695995667.2943268-CDS-E-fasciculatus_F_contig1216:9241..9439Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 9242..9439 +
1622927725.6324544-CDS-E-fasciculatus_F_contig1216:9735..98301622927725.6324544-CDS-E-fasciculatus_F_contig1216:9735..9830Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 9736..9830 +
1695995667.3045702-CDS-E-fasciculatus_F_contig1216:9735..98301695995667.3045702-CDS-E-fasciculatus_F_contig1216:9735..9830Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 9736..9830 +
1622927725.646799-CDS-E-fasciculatus_F_contig1216:9978..100661622927725.646799-CDS-E-fasciculatus_F_contig1216:9978..10066Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 9979..10066 +
1695995667.3143458-CDS-E-fasciculatus_F_contig1216:9978..100661695995667.3143458-CDS-E-fasciculatus_F_contig1216:9978..10066Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 9979..10066 +
1622927725.6651602-CDS-E-fasciculatus_F_contig1216:10195..104021622927725.6651602-CDS-E-fasciculatus_F_contig1216:10195..10402Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 10196..10402 +
1695995667.3247006-CDS-E-fasciculatus_F_contig1216:10195..104021695995667.3247006-CDS-E-fasciculatus_F_contig1216:10195..10402Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 10196..10402 +
1622927725.7016337-CDS-E-fasciculatus_F_contig1216:10580..107451622927725.7016337-CDS-E-fasciculatus_F_contig1216:10580..10745Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 10581..10745 +
1695995667.3352947-CDS-E-fasciculatus_F_contig1216:10580..107451695995667.3352947-CDS-E-fasciculatus_F_contig1216:10580..10745Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 10581..10745 +
1622927725.719457-CDS-E-fasciculatus_F_contig1216:10969..110291622927725.719457-CDS-E-fasciculatus_F_contig1216:10969..11029Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 10970..11029 +
1695995667.34687-CDS-E-fasciculatus_F_contig1216:10969..110291695995667.34687-CDS-E-fasciculatus_F_contig1216:10969..11029Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 10970..11029 +
1622927725.734636-CDS-E-fasciculatus_F_contig1216:11256..113971622927725.734636-CDS-E-fasciculatus_F_contig1216:11256..11397Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 11257..11397 +
1695995667.363381-CDS-E-fasciculatus_F_contig1216:11256..113971695995667.363381-CDS-E-fasciculatus_F_contig1216:11256..11397Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 11257..11397 +
1622927725.7478306-CDS-E-fasciculatus_F_contig1216:11634..117681622927725.7478306-CDS-E-fasciculatus_F_contig1216:11634..11768Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 11635..11768 +
1695995667.3726985-CDS-E-fasciculatus_F_contig1216:11634..117681695995667.3726985-CDS-E-fasciculatus_F_contig1216:11634..11768Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 11635..11768 +
1622927725.764156-CDS-E-fasciculatus_F_contig1216:12252..124671622927725.764156-CDS-E-fasciculatus_F_contig1216:12252..12467Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 12253..12467 +
1695995667.381216-CDS-E-fasciculatus_F_contig1216:12252..124671695995667.381216-CDS-E-fasciculatus_F_contig1216:12252..12467Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 12253..12467 +
1622927725.7800345-CDS-E-fasciculatus_F_contig1216:12699..128931622927725.7800345-CDS-E-fasciculatus_F_contig1216:12699..12893Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 12700..12893 +
1695995667.3913221-CDS-E-fasciculatus_F_contig1216:12699..128931695995667.3913221-CDS-E-fasciculatus_F_contig1216:12699..12893Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 12700..12893 +
1622927725.791121-CDS-E-fasciculatus_F_contig1216:13125..133051622927725.791121-CDS-E-fasciculatus_F_contig1216:13125..13305Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 13126..13305 +
1695995667.4001555-CDS-E-fasciculatus_F_contig1216:13125..133051695995667.4001555-CDS-E-fasciculatus_F_contig1216:13125..13305Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 13126..13305 +
1622927725.8105636-CDS-E-fasciculatus_F_contig1216:13576..137341622927725.8105636-CDS-E-fasciculatus_F_contig1216:13576..13734Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 13577..13734 +
1695995667.4087229-CDS-E-fasciculatus_F_contig1216:13576..137341695995667.4087229-CDS-E-fasciculatus_F_contig1216:13576..13734Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 13577..13734 +
1622927725.8271239-CDS-E-fasciculatus_F_contig1216:13992..141011622927725.8271239-CDS-E-fasciculatus_F_contig1216:13992..14101Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 13993..14101 +
1695995667.4195507-CDS-E-fasciculatus_F_contig1216:13992..141011695995667.4195507-CDS-E-fasciculatus_F_contig1216:13992..14101Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 13993..14101 +
1622927725.8426542-CDS-E-fasciculatus_F_contig1216:14342..144321622927725.8426542-CDS-E-fasciculatus_F_contig1216:14342..14432Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 14343..14432 +
1695995667.4315274-CDS-E-fasciculatus_F_contig1216:14342..144321695995667.4315274-CDS-E-fasciculatus_F_contig1216:14342..14432Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1216 14343..14432 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1216.1680.1prot_E-fasciculatus_F_contig1216.1680.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1216 7746..14432 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1216.1680.1

>prot_E-fasciculatus_F_contig1216.1680.1 ID=prot_E-fasciculatus_F_contig1216.1680.1|Name=mRNA_E-fasciculatus_F_contig1216.1680.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=703bp
MWRRTSVMVLAACYGRCSGFMNFSKGVARASSSLRLGASRSTCSSHGTSI
RGAAAVAAASGRCLGVRGGANRPLHATVPAAETPTSDTAAEEEASPVVSS
LQAWMRKENMDCFIVPSDDPHLSEYASECFNRRAFVSGFTGSAGTAVVLK
DEALLWTDGRYHLQADQQLGKGWRLMKAGKPSVPTIQEFLAKQLPTKSRV
GIDPFVHSASSVKALEKASAKELGAAGISVAAIDHAGDDNPVDKIWGEAR
PPAPQSLVRIHNMEYAGETVKDKLAKIRKTMLEEKADVFVSGLLDEVAYI
LNIRGEDVAHSPVAIAYLLVTETGAIVFIDEAKMSTEVEAELKEHGVEVH
RYEEALDAVRALAKQGKKVWIDPERVNFAFANVVGEDDLIAKPSPVSMAK
GIKNTPELEGMRAAHVRDGVAMVLALSKLERDVAAGQVITEVDVDQRATA
ARSQQDKFVDLSFPTIAGENSNGAIIHYSAAPGSCHTVGPESMLLLDSGA
QYEDGTTDVTRTMHFGEPTAEQKEAYTRVLQGHIGLATAQFPDGTPGFMI
DAFARRHLWDAGLDYQHGTGHGVGAALNVHEGPHSISSRTANTTPLEPGM
IVSNEPGYYKPGSFGVRIENLLEIVDSGISNETLGRRFYSFAPLTFIPMQ
KKLLDQTLLTSKELDWLDEYHEMVWTKLHKLVEDEEALAWLKEATAPVVR
QP*
back to top

mRNA from alignment at E-fasciculatus_F_contig1216:7637..14907+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1216.1680.1 ID=mRNA_E-fasciculatus_F_contig1216.1680.1|Name=mRNA_E-fasciculatus_F_contig1216.1680.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=7271bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1216:7637..14907+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCGCTGTCAACTACTGTTGCTGCACAACCTGGCAGCTCCAGCTACACGGC TACCTTAGGACAACGACTAACGGAAGACGACTCTGAAGTCTAAAGCACAC TCTCGCCCCATGTGGCGGAGAACGAGCGTCATGGTGCTTGCTGCATGCTA TGGTAGGTGCAGCGGCTTCATGAACTTCAGCAAGGTGAGCTGTTACAGAG GTGGCACCCTTGCTCAGTTGGTTTATTCTTGCCCGGCGATGACAGCAGAC TTGCCCTGCGGCAGATCAATGACTGTGCTCTCTTCTCTCCCTCCATATCC CTCGCCCGCACATGGTTCATCTCTACCTGCAACGAGTATCGAAGTGAGTA TGCCCAGCCAATCCTGAAATCCCTCTGCACAGCAGTCTCGGATGTGGTAC CCAGAGGCGGGACACATGCGTGTTTGAACCCATTCAGCAGCGAGTCATAC TTGTACCGCCGTACAACAACACCGCCGGGGTTTAAGCGATGGTTGGGCTT GGAGAGTGATTTGCCACAGCGGCGCACAGCATTGCATTACTGCGGTGTAG ACAGTCTGAAGGGTAGCATCCAGTTTTCCTTCTCCCGGCCCCAAATTATT GGCTCGCCCGCCTTTACCCTGGGATTTACCGACCTGAGCAAGACACGGAT GGGATGGTGCATCGATCGGCACATGCTTCCGATTGTTTATTCGGGTATTC AGTCGTTGCCATCGACAAAGGTGCCGTGCGGTCTCTGCACTTCCACGTCT AAGTTGCTGTTCAGTCAATCCAGGGATTCGAACCCACAATCGAGAAGAAG GAATGGCTACAAGCAGTAGTTTGCTGTAGAGAAAAGACTGCCTCGAAGTT GGAAGCTCGCTCTTCGACGGGTCTGTCGCATACAAGGACCGTCTAACAAT GAGTCTGGGCGTTTTAATTACACAAAAAGTCCAACACTGATGCCCTCGGC TATATGTACAGCGCTAGCACGGGCCGCTGCTGCTGGCGATAAATAAATGG TAGGACGCCGCTGAACTTCTGTTACAGCTTCCGCTACGGAAATAAATGTC TCTGTGCGCTTTACATTCCCTCGCCCGAGGTCAAGTGCTTGTGTCTGGCT GTAGGATGTCCTTAGATTTCTTAAGATACCCCACCCCTTTAGAACGATGT TTGAAGCTTGACTCTGCAGAAGAAACAGAGTACTGTAGTGACGGTGGGGA AAGTGGCGGTGGGACCGTCTCGCCCAGAGTGTTCCGAGCCCGTGTCATTA GATTTTGGCATCCTTTTGGTCGTAGAGCAATCGAGGTGCAACGATGGGTC CAGGGGGTGTGGTATCTTGTGCAACCTGCGGGTAGGTTGAGATTGGGGCG TCCTCGGGCCGCCTTAGACACGAGCTGCTGGCCAAACCCGTGCACACGTC TAGGTGAGTGCGAGAGGTACAATGCGTGTGCCCTTCGCAAAAAACAAATT ATTTTCGCTCACTCTGACAATGCTAATAGACAGCAGCAAGGCGTTGCCGT GTTACGGGGCAGGACGTCTCCCTGGGAACGTTATTTCTGATTGCTTTCGT CGTTCACTGGCTTTCGTCTAAAACGTATTAAACGTCATGGGCCGCTGAAA ATCAGGGAGTTGCCCGAGCGAGTTCGTCTCTGCGTCTCGGGGCCTCCAGA TCTACGTGCAGCTCGCACGGTACAAGTATCCGGGGAGCTGCTGCTGTTGC TGCAGCTTCAGGAAGATGCCTCGGTGTTCGGGGAGGAGCAAACAGGCCTC TGCACGCCACCGTACCAGCCGCAGAAACGCCGACCAGCGACACAGCCGCA GAGGTATGTACAGCACTCGCCCCAAGTTCTGAATCACGTTGTACCAGACA CCTTGCGCGGTGCGCTCTGCTTCGTGTCGTGTGTTCTACACGTGAAAGAA AAAGTAAGCAAGAGGGCCGGTTTGTACGCTAATGTACCAACATCACGAAC GCCACAATGCCCGCTGGGTCACCCCCGTGGTCCAAGAACAGTATGGCGTC TCGTGATGGTCGTGCTTCCGATCTACGCGCATGTATCCGTAGGCTATTTG GGTGTATTCCACTGATGCACCCAATGTCCGTCTCTGACTGCATGTGCAGG AGGAAGCGTCGCCAGTCGTATCTAGCCTTCAGGCTTGGATGCGGAAAGAA AACATGGACTGCTTCATCGTGCCGAGCGACGACCCGCATCTGAGGTGTGA CGTGCGCCGTTTTTCTCAAGCCCAATCCGTCGACCTAGTATTCAGGAAGC TTCTTTCGCGAATCGACTCAGAACAACACACCTGGTTCAGTTTGCCTCGT ACTTGTATCGTTCGCGCCGATGACATGGCTCCCTGTCTACAGCGAGTATG CGTCCGAGTGCTTCAACCGGAGGGCTTTCGTCTCGGGATTTACGGGATCG GCTGGGACGGCGGTGGTGCTGAAGGATGAGGTGAATTCCAGAAAGTTTGG TGAGCGTGGCCTTAGCCACGGGTTTGTGTTTTCGTACTGGATCGACCACT CGATTCCACGCCAGAGCTTACTCTCTCGTCGTTCAACCCGACCTTGGCTT TTGTGGCAGGCCCTTCTGTGGACGGATGGGCGGTACCATCTTCAAGCAGA CCAACAGTTGGGCAAGGGCTGGAGGCTCATGAAGGCCGGCAAGCCCTCTG TTCCAACTATCCAGGAGTTCCTTGCGAAGCAACTGCCGACAAAATCTCGG GTGGGAATCGATCCTTTCGTGCACTCAGCTTCCTCAGTGAAGGCTCTCGA AAAGGCGAGTGCCAAGGTTCGCCATTTCGAAAGCGTTTCTTGCTGTGTCT TTGCCAAGGTTCGCCATTTCCAAAGCGTTTCTTGCTGTGTCTTCACGACT CTCCCTCTCGGTGGCGATTGTTCCGATACGCGGGACACTACCTGCTGCAG CTATACCTGATCATGCGTGTACTACGAGCGTTCTATCTCTCCAGGAGCTC GGTGCTGCAGGCATTTCCGTTGCCGCGATTGATCACGCTGGCGATGACAA CCCGGTGGACAAGATCTGGGGTGAAGCGAGACCACCGGCTCCCCAATCCC TTGTTCGGATACACAATATGGAGTATGCTGGTGAAACAGTCAAGGACAAG CTTGCGAAGGTGGGTGTTTTTTAGGGGGGCATAAAGGCATTTAGAGCTCA CGGGACCCTACCTAAAAACAAGCGACACATGCCATGGGGAACGGGACCGG CACTAGCTCAATATGTGGCGTTTCAGAGGCACTTGTACATCATTGACAGT TACTACGGCATCCATCGAACCATAGATGCACCACAAGTCGAACTTTCACC GCCCTTGTGCGTTCCGGTGTCTCTATCCTGCAGATTCGTAAGACAATGCT GGAGGAGAAGGCGGACGTTTTCGTGAGCGGCCTGCTGGACGAGGTACTAC GCATGCCCGGCTTGCATGTGTTTCTCTTTCTTCGCCTTATGCAAGGAATC CCCACGTTTGCTCATAGAGTCAACGGTACAGCAAATCATCCGGGTTCTGA GTTCGACTTGCGTTGCAGGGTCGGCCGTGCAAGGTCAGCCGATCGGAGCT GCACGAAGGGCGTTGTTATCAAAAAAAGCTGCACGTGTGACGATGTTGCG TTTGATCGTTCACCCCGAAGGTGGCTTACATCCTCAACATCCGCGGGGAG GATGTTGCGCACTCCCCGGTGGCTATTGCGTACCTACTCGTCACGGAGAC CGGGGCGATTGTGTTCATCGACGAGGCCAAGATGTCCACTGAAGTTGAGG CGGAGTTGAAGGTACGAGAAAAGGTTGAGGTGTTGGGAGCACTATCATGG TTAGCCGGAAGTAAGAAGACAGCCTACTGTAATGGCGTAGTTTTTTTTCT CTCAAGGTCGTGCCCTGAAGATTCATCACTTGGTCGCGTTCTTTTAGATC CCGCGTGGCGGCAACGCTCGTCCGAATTGATCCCGCAAGCCTTTCGCATC GGTGGCGCTCGTTACATCGCTACAACTCGTCTGCTCATCTCTCGGCAGGA GCACGGGGTAGAGGTGCACCGCTACGAGGAAGCTTTGGACGCGGTCCGCG CGCTTGCGAAGCAAGGGAAGAAAGTGTGGATCGACCCAGAAAGGGTCAAT TTCGCGTTCGCGAATGTCGTCGGGGAGGACGAGTAAGTCGTGTTGGGGTC AGGAATAGGTCACTCTTGGCGCAAAACCCACCGTAGAAAGTGCGTGTAGG AGTACTTAAAACAATCCGAGACTTAAAGCCCGAGGCGGGGTCTTGAGAAG TGCGCACCGAATGAGAGCGTGGAGGACTTGCCGGCCACTGGGGCACGTAT TGCCTACAACCAAGCTCGACCGTTAACAGCATGCAACGCCGTGGCGTCAT TGTGTCCGCCATTGAGTTTGGCTTTGTCGCCGCTCGTCTTGAGTATTGGC CAGTGTCTCTCCATAAGACAGAATCATGCAAATCTCTTCGTCTACTCCAC AGTAATCGTCGTTTTACGTTCACGTGTTGGCTACTCTGCAATCTAACATT CCAAGTTTGTCTTTTCGCAACAACAGTAGTTTGTTGTTGCCATCCTATGC ATATAACGATCAACTGAATCGAATCTCATTGTGTGCGAATTCATGGATTG TCCACCCGAGAAACAGCCTCATCGCAAAGCCCTCGCCAGTGTCTATGGCT AAGGGGATCAAGAACACGCCGGAACTTGAAGGAATGCGGGCAGCTCATGT GCGGGACGGTGTTGCGATGGTGCTGGCGTTATCGAAGTTGGAGCGCGATG TCGCAGCGGGGCAGGTTATCACGGAGGTGGATGTTGATCAACGGGCGACT GCTGCAAGATCACAGCAAGACAAATTTGTGGGTAAGCCCAGGTGTTCTGA GGATTGTTGAATTCCACCGCACCTGGCAACACCGCCTTCGCGATACCCAT CGTGCGTCGTATCCCCCTTTCGGTTTTGCGTTTGCAACCAACAGTGCTGC AAATCAGCAACTTTATGGCAAAGGTGCTTCACTTTTGCGCGCGCATGTTT TGTATTTTCCTAACTTGTTGTTTCACCCCGTTCTTCCCGTCCGTGCTACG GCCCACGCACTAGATTTGAGCTTTCCCACCATCGCGGGGGAGAACTCAAA CGGGGCTATCATTCATTACTCGGCGGCGCCTGGCTCGTGCCACACTGTTG GACCAGAATCTATGCTCTTGCTCGATTCTGGAGCACAATATGAGGATGGC ACTACGGACGTTACTCGGACGATGCATTTCGGGGAACCAACGGCCGAACA AAAAGAGGTTCGTGACGAAACGTCGAATCTTCCGGCGTGCTGTGTGTCTT TCCTTCGACTATTGTCTACGACGTATGAAGCGCGTTCGCGTTCAATCGTT TCTGTCGTTGTCGCAATATGGGTGGTCAAAGTCCTCCGGAATACATGGTT ACGCTTGCATTTCGAGTGAGCGTACACAAGCAGAGCGACTGGCTCTCCTC TTCTCTGCTCCGCCTGTTCTGTATTTCTGACCCACCTAGGCGTACACTCG CGTTCTTCAAGGACACATTGGCCTTGCAACGGCCCAGTTTCCTGATGGAA CGCCGGGATTTATGATAGACGCATTTGCTCGGCGTCATCTGTGGGACGCT GGATTAGACTACCAGCACGGTACGGGACACGGCGTGGGTGCCGCGTTGAA CGTTCACGAGGGCCCACACGTGAGTTCCTTCTCCTCCTCGTTACCGATGT TCTGACGTGGATACGTTTTTGTGTTGTGATAGTGTCGAGTCCGAAATGTC CTCACGCGCCAGCAACTCTGTTTCTCTTTATTGCAGTTGCCGGCAATGTC TTCGTTTTAGGGATGCCCCCGATGCCTTGCACCTACTTTGTATTTCTGGT ATGCAATCCGGACCAATCGAGGAAGTCTCTGTCTTCTTTTTTCAGCCACC AATCCCGAATACCTGCCTTCCCTCTACTCGTTTCGCCCAGTCTATTAGTT CACGAACAGCCAACACTACCCCTCTTGAGCCCGGAATGATCGTGAGCAAC GAACCTGGATACTACAAGCCGGGAAGCTTTGGGGTCCGGATCGAAAACCT GCTCGAGATCGTGGATTCTGGGATCTCCAACGAGACTCTTGGGCGAAGGT ACATCCCCGAAATCAGTCATGCATTATGCATCCTCTACGTGCTCAGGGTG AAAATGATTCTGGATACGGATCGATGAGAACATGATGGAGCCTTGCCAAC GCGGGAGGACTTTTCCTTTTGCGGCAACGCTTGTCCTTGTTGTGTGCTGC GGTTCTCCGACGGTGTGTTTGTTGCACGACCTTCATGATCTTCTGTTGGC ACCGCACTTTTTTGTTGTTCTTGCTGTTCGGCCTGTCATCCGTCCCTTCT TGGCAGATTTTATTCGTTCGCGCCTCTCACCTTCATCCCGATGCAAAAGA AGCTCCTCGACCAAACACTTCTGACGTCCAAGGAGCTGGACTGGCTGGAC GAGTACCACGAAATGGTGAGTTTTCCTGCTCGTCAGGAACTGAGCAGCTT GGAGTATCATGTGGCCAAGGGCGAGCGGCCGCTCACACCTTGACCCACGA ACAAAAGTTCCGAAATTCTGGCGGGATGATGCCCGTGCCTCTCCCAGCTC TCTCTCCTCGCCGATGCTGGTGTTGCCTTGTCTATCGGCTGCAATGGCTT CGTATGTAGCCTTCGAGCCGCTCTGAATCATCTGCCGTGTTTCGTTCAAC GCCCAGGTTTGGACAAAACTGCACAAGCTGGTGGAGGACGAAGAGGCGCT TGCTTGGTTAAAGGAAGCCACAGCCCCCGTGGTACGGCAGCCATAGACAA GGCGCCACCCGATTGGTCTTGAGAACGCCTCTCTTCCCTGTCGAGGCGTT TGGAGGACGAGGCGTTGTTGAAAACGTAGCGTGTTGGCGAGTATGTAGGC ACTCAGTCCGAGCCAGATTCTCGACTCTTCTCTTCCCTTTCGCTGGTGCT GCTGCTGTCGTGGATCGCGGCACCCTCCGCGTCCGTGGTATTCCCGCGCC TTTACTCCATGTTTCTTAACGACGCGCCTGGGATGCGGTGGTGGAATGTT GGGGTTATATGGCCTCCCGTGGGGGTTGCCGTTGATTGCAATGGTGCTGC ATCTGAAGTAGGTCGAGGTAGAGGTGGATCGGCGTGAGTGTTGATGGTTC TTAGGTGGACAATCCAAAATTGTAATTATGCGTTTACATTTCTCCTAGGT TTTGCAGAACACGTGCTTGATTCCTGTTGGTACATGGAGTGCGGCCTGTG GACGACCTTGCTGAGCGAAAC
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1216:7637..14907+

>mRNA_E-fasciculatus_F_contig1216.1680.1 ID=mRNA_E-fasciculatus_F_contig1216.1680.1|Name=mRNA_E-fasciculatus_F_contig1216.1680.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4218bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1216:7637..14907+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTGGCGGAGAACGAGCGTCATGGTGCTTGCTGCATGCTATGGTAGGTG
CAGCGGCTTCATGAACTTCAGCAAGATGTGGCGGAGAACGAGCGTCATGG
TGCTTGCTGCATGCTATGGTAGGTGCAGCGGCTTCATGAACTTCAGCAAG
GGAGTTGCCCGAGCGAGTTCGTCTCTGCGTCTCGGGGCCTCCAGATCTAC
GTGCAGCTCGCACGGTACAAGTATCCGGGGAGCTGCTGCTGTTGCTGCAG
CTTCAGGAAGATGCCTCGGTGTTCGGGGAGGAGCAAACAGGCCTCTGCAC
GCCACCGTACCAGCCGCAGAAACGCCGACCAGCGACACAGCCGCAGAGGG
AGTTGCCCGAGCGAGTTCGTCTCTGCGTCTCGGGGCCTCCAGATCTACGT
GCAGCTCGCACGGTACAAGTATCCGGGGAGCTGCTGCTGTTGCTGCAGCT
TCAGGAAGATGCCTCGGTGTTCGGGGAGGAGCAAACAGGCCTCTGCACGC
CACCGTACCAGCCGCAGAAACGCCGACCAGCGACACAGCCGCAGAGGAGG
AAGCGTCGCCAGTCGTATCTAGCCTTCAGGCTTGGATGCGGAAAGAAAAC
ATGGACTGCTTCATCGTGCCGAGCGACGACCCGCATCTGAGGAGGAAGCG
TCGCCAGTCGTATCTAGCCTTCAGGCTTGGATGCGGAAAGAAAACATGGA
CTGCTTCATCGTGCCGAGCGACGACCCGCATCTGAGCGAGTATGCGTCCG
AGTGCTTCAACCGGAGGGCTTTCGTCTCGGGATTTACGGGATCGGCTGGG
ACGGCGGTGGTGCTGAAGGATGAGCGAGTATGCGTCCGAGTGCTTCAACC
GGAGGGCTTTCGTCTCGGGATTTACGGGATCGGCTGGGACGGCGGTGGTG
CTGAAGGATGAGGCCCTTCTGTGGACGGATGGGCGGTACCATCTTCAAGC
AGACCAACAGTTGGGCAAGGGCTGGAGGCTCATGAAGGCCGGCAAGCCCT
CTGTTCCAACTATCCAGGAGTTCCTTGCGAAGCAACTGCCGACAAAATCT
CGGGTGGGAATCGATCCTTTCGTGCACTCAGCTTCCTCAGTGAAGGCTCT
CGAAAAGGCGAGTGCCAAGGCCCTTCTGTGGACGGATGGGCGGTACCATC
TTCAAGCAGACCAACAGTTGGGCAAGGGCTGGAGGCTCATGAAGGCCGGC
AAGCCCTCTGTTCCAACTATCCAGGAGTTCCTTGCGAAGCAACTGCCGAC
AAAATCTCGGGTGGGAATCGATCCTTTCGTGCACTCAGCTTCCTCAGTGA
AGGCTCTCGAAAAGGCGAGTGCCAAGGAGCTCGGTGCTGCAGGCATTTCC
GTTGCCGCGATTGATCACGCTGGCGATGACAACCCGGTGGACAAGATCTG
GGGTGAAGCGAGACCACCGGCTCCCCAATCCCTTGTTCGGATACACAATA
TGGAGTATGCTGGTGAAACAGTCAAGGACAAGCTTGCGAAGGAGCTCGGT
GCTGCAGGCATTTCCGTTGCCGCGATTGATCACGCTGGCGATGACAACCC
GGTGGACAAGATCTGGGGTGAAGCGAGACCACCGGCTCCCCAATCCCTTG
TTCGGATACACAATATGGAGTATGCTGGTGAAACAGTCAAGGACAAGCTT
GCGAAGATTCGTAAGACAATGCTGGAGGAGAAGGCGGACGTTTTCGTGAG
CGGCCTGCTGGACGAGATTCGTAAGACAATGCTGGAGGAGAAGGCGGACG
TTTTCGTGAGCGGCCTGCTGGACGAGGTGGCTTACATCCTCAACATCCGC
GGGGAGGATGTTGCGCACTCCCCGGTGGCTATTGCGTACCTACTCGTCAC
GGAGACCGGGGCGATTGTGTTCATCGACGAGGCCAAGATGTCCACTGAAG
TTGAGGCGGAGTTGAAGGTGGCTTACATCCTCAACATCCGCGGGGAGGAT
GTTGCGCACTCCCCGGTGGCTATTGCGTACCTACTCGTCACGGAGACCGG
GGCGATTGTGTTCATCGACGAGGCCAAGATGTCCACTGAAGTTGAGGCGG
AGTTGAAGGAGCACGGGGTAGAGGTGCACCGCTACGAGGAAGCTTTGGAC
GCGGTCCGCGCGCTTGCGAAGCAAGGGAAGAAAGTGTGGATCGACCCAGA
AAGGGTCAATTTCGCGTTCGCGAATGTCGTCGGGGAGGACGAGAGCACGG
GGTAGAGGTGCACCGCTACGAGGAAGCTTTGGACGCGGTCCGCGCGCTTG
CGAAGCAAGGGAAGAAAGTGTGGATCGACCCAGAAAGGGTCAATTTCGCG
TTCGCGAATGTCGTCGGGGAGGACGACCTCATCGCAAAGCCCTCGCCAGT
GTCTATGGCTAAGGGGATCAAGAACACGCCGGAACTTGAAGGAATGCGGG
CAGCTCATGTGCGGGACGGTGTTGCGATGGTGCTGGCGTTATCGAAGTTG
GAGCGCGATGTCGCAGCGGGGCAGGTTATCACGGAGGTGGATGTTGATCA
ACGGGCGACTGCTGCAAGATCACAGCAAGACAAATTTGTGGCCTCATCGC
AAAGCCCTCGCCAGTGTCTATGGCTAAGGGGATCAAGAACACGCCGGAAC
TTGAAGGAATGCGGGCAGCTCATGTGCGGGACGGTGTTGCGATGGTGCTG
GCGTTATCGAAGTTGGAGCGCGATGTCGCAGCGGGGCAGGTTATCACGGA
GGTGGATGTTGATCAACGGGCGACTGCTGCAAGATCACAGCAAGACAAAT
TTGTGGATTTGAGCTTTCCCACCATCGCGGGGGAGAACTCAAACGGGGCT
ATCATTCATTACTCGGCGGCGCCTGGCTCGTGCCACACTGTTGGACCAGA
ATCTATGCTCTTGCTCGATTCTGGAGCACAATATGAGGATGGCACTACGG
ACGTTACTCGGACGATGCATTTCGGGGAACCAACGGCCGAACAAAAAGAG
ATTTGAGCTTTCCCACCATCGCGGGGGAGAACTCAAACGGGGCTATCATT
CATTACTCGGCGGCGCCTGGCTCGTGCCACACTGTTGGACCAGAATCTAT
GCTCTTGCTCGATTCTGGAGCACAATATGAGGATGGCACTACGGACGTTA
CTCGGACGATGCATTTCGGGGAACCAACGGCCGAACAAAAAGAGGCGTAC
ACTCGCGTTCTTCAAGGACACATTGGCCTTGCAACGGCCCAGTTTCCTGA
TGGAACGCCGGGATTTATGATAGACGCATTTGCTCGGCGTCATCTGTGGG
ACGCTGGATTAGACTACCAGCACGGTACGGGACACGGCGTGGGTGCCGCG
TTGAACGTTCACGAGGGCCCACACGCGTACACTCGCGTTCTTCAAGGACA
CATTGGCCTTGCAACGGCCCAGTTTCCTGATGGAACGCCGGGATTTATGA
TAGACGCATTTGCTCGGCGTCATCTGTGGGACGCTGGATTAGACTACCAG
CACGGTACGGGACACGGCGTGGGTGCCGCGTTGAACGTTCACGAGGGCCC
ACACTCTATTAGTTCACGAACAGCCAACACTACCCCTCTTGAGCCCGGAA
TGATCGTGAGCAACGAACCTGGATACTACAAGCCGGGAAGCTTTGGGGTC
CGGATCGAAAACCTGCTCGAGATCGTGGATTCTGGGATCTCCAACGAGAC
TCTTGGGCGAAGTCTATTAGTTCACGAACAGCCAACACTACCCCTCTTGA
GCCCGGAATGATCGTGAGCAACGAACCTGGATACTACAAGCCGGGAAGCT
TTGGGGTCCGGATCGAAAACCTGCTCGAGATCGTGGATTCTGGGATCTCC
AACGAGACTCTTGGGCGAAGATTTTATTCGTTCGCGCCTCTCACCTTCAT
CCCGATGCAAAAGAAGCTCCTCGACCAAACACTTCTGACGTCCAAGGAGC
TGGACTGGCTGGACGAGTACCACGAAATGATTTTATTCGTTCGCGCCTCT
CACCTTCATCCCGATGCAAAAGAAGCTCCTCGACCAAACACTTCTGACGT
CCAAGGAGCTGGACTGGCTGGACGAGTACCACGAAATGGTTTGGACAAAA
CTGCACAAGCTGGTGGAGGACGAAGAGGCGCTTGCTTGGTTAAAGGAAGC
CACAGCCCCCGTGGTACGGCAGCCATAGGTTTGGACAAAACTGCACAAGC
TGGTGGAGGACGAAGAGGCGCTTGCTTGGTTAAAGGAAGCCACAGCCCCC
GTGGTACGGCAGCCATAG
back to top