mRNA_E-fasciculatus_F_contig12157.1678.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12157.1678.1 vs. uniprot
Match: A0A6H5KJH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH4_9PHAE) HSP 1 Score: 306 bits (783), Expect = 1.800e-98 Identity = 159/162 (98.15%), Postives = 160/162 (98.77%), Query Frame = 1
Query: 7 QTLPGEISRFENLTTIEADNNGLSALPSALARMAIYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNNISPVPLELGLCT 492
QTLPGEISRFENLTTIEADNNGLSALP ALARMAIYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLE LDLSNNRLRSLGDVVLMTWLRRLNLENN+ISPVPLELGLCT
Sbjct: 347 QTLPGEISRFENLTTIEADNNGLSALPDALARMAIYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLENLDLSNNRLRSLGDVVLMTWLRRLNLENNDISPVPLELGLCT 508
BLAST of mRNA_E-fasciculatus_F_contig12157.1678.1 vs. uniprot
Match: D8LFI7_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI7_ECTSI) HSP 1 Score: 221 bits (564), Expect = 2.330e-65 Identity = 118/153 (77.12%), Postives = 128/153 (83.66%), Query Frame = 1
Query: 49 TIEADNNGLSALPSALAR-----MAIYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNNISPVPLELGLCT 492
T++ + G+++LP L + A+ R L N L +AFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLETLDLSNNRLR LGDVVLMTWLRRLNLENN+ISPVPLELGLCT
Sbjct: 448 TLDVEGRGMTSLPPGLFQDDRTLSAVTRAKLSGNKL------QAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLETLDLSNNRLRCLGDVVLMTWLRRLNLENNDISPVPLELGLCT 594
BLAST of mRNA_E-fasciculatus_F_contig12157.1678.1 vs. uniprot
Match: A0A329S1P8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S1P8_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 5.000e-21 Identity = 61/164 (37.20%), Postives = 91/164 (55.49%), Query Frame = 1
Query: 1 IFQTLPGEISRFENLTTIEADNNGLSAL-PSALARMAIYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNNISPVPLELGLC 489
+ ++LP I +L T+ + N L +L PS A + L LR+NSLS+ + E PA L +++ELDL SN L VP I R L+TL+L +N + + PW+ + ++ + LS+N+LRSLG + L L+ ENNN++ VP ELGLC
Sbjct: 442 LLRSLPAVIGELVSLKTLTVEENELQSLHPSIAALPHLELLRLRKNSLSAESISEFLGDSPA--------LGNTLKELDLRSNSLLTVPVEICQLRSLETLLLGFNRIESLDRFPWSQMANVSVVSLSDNKLRSLGRIYDAPLLASLSFENNNLTKVPCELGLC 597
BLAST of mRNA_E-fasciculatus_F_contig12157.1678.1 vs. uniprot
Match: A0A421FIP6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FIP6_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 5.300e-20 Identity = 59/163 (36.20%), Postives = 93/163 (57.06%), Query Frame = 1
Query: 4 FQTLPGEISRFENLTTIEADNNGLSALPSALARMA-IYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNNISPVPLELGLC 489
F+ LP EI + L T+ ++N L +L ++A + + L L++N LS+ + E FL S L S++ELDL +N L +P + L+TL+LA+N + + PW+ L ++ + +SNN+LRSLG + L L+ ENNN++ VP ELGLC
Sbjct: 238 FRVLPAEIGELKLLKTLTVESNELQSLHPSIAGLPHLELLRLQKNQLSAESISE-FLH-------NSTALGRSLKELDLRNNCLTSMPLELCQLHSLETLLLAFNRIETLEQFPWSQLTNVSLISISNNKLRSLGRIYDAPLLASLSFENNNLTKVPCELGLC 392
BLAST of mRNA_E-fasciculatus_F_contig12157.1678.1 vs. uniprot
Match: A0A0N7L4J0_PLAHL (Leucine-rich repeat protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4J0_PLAHL) HSP 1 Score: 95.9 bits (237), Expect = 5.940e-20 Identity = 60/160 (37.50%), Postives = 90/160 (56.25%), Query Frame = 1
Query: 13 LPGEISRFENLTTIEADNNGLSALPSALARMA-IYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNNISPVPLELGLC 489
LP I L T+ AD N L L S++A + + L LR+N L++ A + FL S L +++E+DL SN L +P R L+ L+L++N + + PW+ L + +DLS+N+LRSLG + L+ L+ ENNNI+ VP+ELGLC
Sbjct: 445 LPAVIGELMFLKTLTADENDLEILHSSIAALPRLEVLRLRKNYLTADAIAD-FLR-------NSTTLGTTLKEIDLRSNKLSIIPVETGQLRSLENLLLSHNQIEALDQFPWSHLTKVSVIDLSDNKLRSLGRIYDAPLLQSLSFENNNITKVPVELGLC 596
BLAST of mRNA_E-fasciculatus_F_contig12157.1678.1 vs. uniprot
Match: A0A2D4C1Q2_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1Q2_PYTIN) HSP 1 Score: 95.9 bits (237), Expect = 6.430e-20 Identity = 62/167 (37.13%), Postives = 96/167 (57.49%), Query Frame = 1
Query: 1 IFQTLPGEISRFENLTTIEADNNGLSALPSALARMA-IYRLSLRRNSLSSSAAVEAFLAPPAIAP---PGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNNISPVPLELGLC 489
+ +LP I + L ++ A++N + ++ ++A + + L +R+N L++SA +E FL + AP PG ++ELDL +N L ++P +I L+TL+LA+N + + G PW L + LS+NRLRSLG V L L L ENNN+ VP ELGLC
Sbjct: 1293 LLTSLPNTIGQLVALQSLTAEDNRIKSVDPSIALLPQLQLLRIRKNQLTASA-IEEFLGSISGAPVPCPG-------LKELDLRNNLLTDLPNSIAKLPKLETLLLAFNKVETLDGFPWHKLQRTSVISLSDNRLRSLGQVYLAPMLASLAFENNNLVSVPCELGLC 1451
BLAST of mRNA_E-fasciculatus_F_contig12157.1678.1 vs. uniprot
Match: A0A3F2RWM2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWM2_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 7.790e-20 Identity = 59/163 (36.20%), Postives = 93/163 (57.06%), Query Frame = 1
Query: 4 FQTLPGEISRFENLTTIEADNNGLSALPSALARMA-IYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNNISPVPLELGLC 489
F+ LP EI + L T+ ++N L +L ++A + + L L++N LS+ + E FL S L S++ELDL +N L +P + L+TL+LA+N + + PW+ L ++ + +SNN+LRSLG + L L+ ENNN++ VP ELGLC
Sbjct: 391 FRVLPAEIGELKLLKTLTVESNELQSLHPSIAGLPHLGLLRLQKNQLSAESISE-FLH-------NSTALGRSLKELDLRNNCLTSMPLELCQLHSLETLLLAFNRIETLEQFPWSQLTNVSLISISNNKLRSLGRIYDAPLLASLSFENNNLTKVPCELGLC 545
BLAST of mRNA_E-fasciculatus_F_contig12157.1678.1 vs. uniprot
Match: T0QQ18_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QQ18_SAPDV) HSP 1 Score: 88.2 bits (217), Expect = 2.840e-17 Identity = 54/160 (33.75%), Postives = 86/160 (53.75%), Query Frame = 1
Query: 13 LPGEISRFENLTTIEADNNGLSALP-SALARMAIYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNNISPVPLELGLC 489
LP E+ +TT+ A++ L ALP S L + L LR+NSL+ AF A + ++ELD+ +N L +P + L TL+L++N LS ++G+PW + +L + S+N+L LG + L L++ENN++ +P ELGLC
Sbjct: 439 LPDELGLCLQITTLVAEDCRLEALPTSVLGLPHLVYLRLRKNSLTEHTFAGAFHA------------RMKLKELDVRNNALSMLPANLHQLSSLNTLLLSFNRLSTLAGMPWRLMKALSIVSASDNKLTDLGTIFEAPTLSSLSVENNSLQAIPAELGLC 586
BLAST of mRNA_E-fasciculatus_F_contig12157.1678.1 vs. uniprot
Match: A0A662X873_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X873_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 5.270e-17 Identity = 58/165 (35.15%), Postives = 87/165 (52.73%), Query Frame = 1
Query: 7 QTLPGEISRFENL---TTIEADNNGLSAL-PSALARMAIYRLSLRRNSLSSSAAVEAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNNISPVPLELGLC 489
++LP I L TT+ ++N L +L PS A + L LR+N LS+ + + PA LS +++E DL +N L +P I L+TL+L +N + + PW+ L L +S+N+LRSLG + L L+ ENNN++ VP ELGLC
Sbjct: 406 RSLPSAIGELRGLKVSTTLTVEDNELQSLHPSIAALPHLELLRLRKNPLSADSISDFLGDSPA--------LSSTLKEFDLRNNCLTTLPLEISQLHELETLLLGFNKMETLERFPWSHLAKLSLASISDNKLRSLGRIYDAPMLASLSFENNNLTKVPCELGLC 562
BLAST of mRNA_E-fasciculatus_F_contig12157.1678.1 vs. uniprot
Match: A0A8K1CMS5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMS5_PYTOL) HSP 1 Score: 85.1 bits (209), Expect = 3.360e-16 Identity = 38/94 (40.43%), Postives = 59/94 (62.77%), Query Frame = 1
Query: 208 LSISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLETLDLSNNRLRSLGDVVLMTWLRRLNLENNNISPVPLELGLC 489
L I+ELDL +N L ++P + ++TL+L++N + + G PW LG + + +S+NRL+SLG + L L+ ENNN++ VP ELGLC
Sbjct: 459 LGSCIKELDLRNNQLTQMPSQLRQLASMETLLLSFNKIESLDGFPWHELGKVSVVSISDNRLKSLGQIYHTPMLASLSFENNNLTQVPCELGLC 552 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12157.1678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12157.1678.1 >prot_E-fasciculatus_F_contig12157.1678.1 ID=prot_E-fasciculatus_F_contig12157.1678.1|Name=mRNA_E-fasciculatus_F_contig12157.1678.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=164bp IFQTLPGEISRFENLTTIEADNNGLSALPSALARMAIYRLSLRRNSLSSSback to top mRNA from alignment at E-fasciculatus_F_contig12157:490..1505- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12157.1678.1 ID=mRNA_E-fasciculatus_F_contig12157.1678.1|Name=mRNA_E-fasciculatus_F_contig12157.1678.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1016bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12157:490..1505- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12157:490..1505- >mRNA_E-fasciculatus_F_contig12157.1678.1 ID=mRNA_E-fasciculatus_F_contig12157.1678.1|Name=mRNA_E-fasciculatus_F_contig12157.1678.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=984bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12157:490..1505- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |