mRNA_E-fasciculatus_F_contig12154.1674.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12154.1674.1 vs. uniprot
Match: D7FIR4_ECTSI (Nucleolar GTP-binding protein 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIR4_ECTSI) HSP 1 Score: 261 bits (666), Expect = 2.680e-81 Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 1
Query: 1 KVVDTPGILDHPLEERNTIEMQAVTALAHLQCCVLYFIDISEQCGYTIKEQVSLFESIKPLFANKQLLVIANKTDVAPFADIKEEDRVSIERLADSAGVELHLMSNETEEGVQEVKTAACDKLLQARVDARMAGKK 408
+VVDTPGILDHPLEERNTIEMQAVTALAHLQCCVLYFIDISEQCGYTIKEQVSLFESIKPLFANKQLLVIANKTDVAPFADIKEEDRVSIE+LADSAGVELHLMSNETEEGVQEVKTAACDKLLQARVDARMAGKK
Sbjct: 218 QVVDTPGILDHPLEERNTIEMQAVTALAHLQCCVLYFIDISEQCGYTIKEQVSLFESIKPLFANKQLLVIANKTDVAPFADIKEEDRVSIEKLADSAGVELHLMSNETEEGVQEVKTAACDKLLQARVDARMAGKK 353
BLAST of mRNA_E-fasciculatus_F_contig12154.1674.1 vs. uniprot
Match: A0A836CDN0_9STRA (Nucleolar GTP-binding protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDN0_9STRA) HSP 1 Score: 202 bits (513), Expect = 7.650e-59 Identity = 103/136 (75.74%), Postives = 114/136 (83.82%), Query Frame = 1
Query: 1 KVVDTPGILDHPLEERNTIEMQAVTALAHLQCCVLYFIDISEQCGYTIKEQVSLFESIKPLFANKQLLVIANKTDVAPFADIKEEDRVSIERLADSAGVELHLMSNETEEGVQEVKTAACDKLLQARVDARMAGKK 408
+VVDTPGILDH LEERNTIEMQAVTALAHLQCCVL+ IDISEQCGY I EQ+ LFESIKPLFANKQL+++ANKTDV PF ++E DR +I A VEL MSN +EEGV VKTAACDKLLQARVDAR+AGKK
Sbjct: 218 QVVDTPGILDHALEERNTIEMQAVTALAHLQCCVLFMIDISEQCGYPIAEQLRLFESIKPLFANKQLIIVANKTDVLPFDQVREPDRTNILAAAAGVNVELMFMSNVSEEGVMAVKTAACDKLLQARVDARLAGKK 353
BLAST of mRNA_E-fasciculatus_F_contig12154.1674.1 vs. uniprot
Match: A0A7S2UXL7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXL7_9STRA) HSP 1 Score: 184 bits (468), Expect = 8.320e-57 Identity = 92/132 (69.70%), Postives = 108/132 (81.82%), Query Frame = 1
Query: 1 KVVDTPGILDHPLEERNTIEMQAVTALAHLQCCVLYFIDISEQCGYTIKEQVSLFESIKPLFANKQLLVIANKTDVAPFADIKEEDRVSIERLADSAGVELHLMSNETEEGVQEVKTAACDKLLQARVDARM 396
+VVDTPGILDHPLEERNTIEMQAVTALAHLQC VL+FIDISEQCGYTI++QVSLFESI+PLFANKQL+++A K DV P D+K E + +E+ S GVEL +SN +EEG+ VK ACDKLL ARV A +
Sbjct: 10 QVVDTPGILDHPLEERNTIEMQAVTALAHLQCTVLFFIDISEQCGYTIEQQVSLFESIRPLFANKQLMIVATKIDVMPLEDLKPEHKELLEKTCASVGVELDSLSNFSEEGISAVKVKACDKLLTARVQAHL 141
BLAST of mRNA_E-fasciculatus_F_contig12154.1674.1 vs. uniprot
Match: A0A6V1RDW6_HETAK (Nucleolar GTP-binding protein 1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RDW6_HETAK) HSP 1 Score: 192 bits (489), Expect = 1.560e-55 Identity = 92/136 (67.65%), Postives = 114/136 (83.82%), Query Frame = 1
Query: 1 KVVDTPGILDHPLEERNTIEMQAVTALAHLQCCVLYFIDISEQCGYTIKEQVSLFESIKPLFANKQLLVIANKTDVAPFADIKEEDRVSIERLADSAGVELHLMSNETEEGVQEVKTAACDKLLQARVDARMAGKK 408
+VVDTPG+LDHPLEERNTIEMQA+TALAHLQCCVLYF+D+SEQCG+TI +Q++LFES++PLFANKQLL++ NK D + D+K EDR +IE+ A+ +G EL MSN +EEGV VK ACDKLL ARV+ R+ GKK
Sbjct: 218 QVVDTPGLLDHPLEERNTIEMQAITALAHLQCCVLYFVDVSEQCGWTIAQQLALFESVRPLFANKQLLLVVNKIDQVKWEDLKAEDREAIEKCAEGSGAELMKMSNVSEEGVSAVKNKACDKLLTARVETRLTGKK 353
BLAST of mRNA_E-fasciculatus_F_contig12154.1674.1 vs. uniprot
Match: A0A7S2BZF7_9STRA (Nucleolar GTP-binding protein 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BZF7_9STRA) HSP 1 Score: 189 bits (479), Expect = 4.340e-54 Identity = 96/136 (70.59%), Postives = 111/136 (81.62%), Query Frame = 1
Query: 1 KVVDTPGILDHPLEERNTIEMQAVTALAHLQCCVLYFIDISEQCGYTIKEQVSLFESIKPLFANKQLLVIANKTDVAPFADIKEEDRVSIERLADSAGVELHLMSNETEEGVQEVKTAACDKLLQARVDARMAGKK 408
+VVDTPGILDHPL+ERNTIEMQA+TALAHLQCCVLYF+DISEQCG+TI +QV+LFE+IKPLFANKQLL+I NK DV F I E++R I + + G EL MSN +EEGV VK ACD LLQARVDAR+AG K
Sbjct: 220 QVVDTPGILDHPLDERNTIEMQAITALAHLQCCVLYFLDISEQCGFTIAQQVALFENIKPLFANKQLLLIVNKIDVVAFDAISEDNRNLITEMVKTTGAELMHMSNVSEEGVSAVKNRACDLLLQARVDARVAGSK 355
BLAST of mRNA_E-fasciculatus_F_contig12154.1674.1 vs. uniprot
Match: A0A7S1GIK8_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIK8_CYCTE) HSP 1 Score: 176 bits (445), Expect = 1.220e-53 Identity = 87/136 (63.97%), Postives = 106/136 (77.94%), Query Frame = 1
Query: 1 KVVDTPGILDHPLEERNTIEMQAVTALAHLQCCVLYFIDISEQCGYTIKEQVSLFESIKPLFANKQLLVIANKTDVAPFADIKEEDRVSIERLADSAGVELHLMSNETEEGVQEVKTAACDKLLQARVDARMAGKK 408
+V+DTPGILDHPLEERNTIEMQA+TALAHL C VLYFIDISEQCGYTI +Q SLF SI+PLFANKQL+V+ NK D P+ ++ E + ++ LAD A L MSN +E+GV VK ACD+LL +RVD R++G K
Sbjct: 16 QVIDTPGILDHPLEERNTIEMQAITALAHLTCSVLYFIDISEQCGYTIDQQCSLFHSIRPLFANKQLIVVVNKIDQQPWDTLEAEKKEKVQALADLANCNLMTMSNVSEDGVSAVKATACDRLLASRVDIRVSGNK 151
BLAST of mRNA_E-fasciculatus_F_contig12154.1674.1 vs. uniprot
Match: A0A7S1UNH0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNH0_9STRA) HSP 1 Score: 177 bits (450), Expect = 2.310e-52 Identity = 87/136 (63.97%), Postives = 107/136 (78.68%), Query Frame = 1
Query: 1 KVVDTPGILDHPLEERNTIEMQAVTALAHLQCCVLYFIDISEQCGYTIKEQVSLFESIKPLFANKQLLVIANKTDVAPFADIKEEDRVSIERLADSAGVELHLMSNETEEGVQEVKTAACDKLLQARVDARMAGKK 408
+V+DTPGILDHPLEERNTIEMQA+TALAHL C VLYF+DISEQCGY I++Q SLF SIKPLFANKQL+++ NK D + + E+ + ++ LAD++ L MSN +E GV VK AACDKLL ARVDAR++G K
Sbjct: 61 QVIDTPGILDHPLEERNTIEMQAITALAHLTCSVLYFVDISEQCGYPIEQQCSLFRSIKPLFANKQLIIVVNKVDQQSWESLDEDKKTQVQSLADASNCTLMTMSNLSEHGVSAVKNAACDKLLAARVDARVSGHK 196
BLAST of mRNA_E-fasciculatus_F_contig12154.1674.1 vs. uniprot
Match: B7GAN5_PHATC (Nucleolar GTP-binding protein 1 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAN5_PHATC) HSP 1 Score: 183 bits (465), Expect = 6.140e-52 Identity = 91/136 (66.91%), Postives = 107/136 (78.68%), Query Frame = 1
Query: 1 KVVDTPGILDHPLEERNTIEMQAVTALAHLQCCVLYFIDISEQCGYTIKEQVSLFESIKPLFANKQLLVIANKTDVAPFADIKEEDRVSIERLADSAGVELHLMSNETEEGVQEVKTAACDKLLQARVDARMAGKK 408
+V+DTPGILDHPLEERNTIEMQA+ ALAHL C VLYF+DISEQCGYTI +Q SLF SIKPLFANKQL+V+ NK D P+ ++E R ++ LAD A L MSN +E GV +VK AACDKLL RVDAR++GKK
Sbjct: 218 QVIDTPGILDHPLEERNTIEMQAIIALAHLTCSVLYFVDISEQCGYTIDQQCSLFRSIKPLFANKQLIVVVNKVDQQPWESLEEAKRAMVQGLADDANCSLMTMSNLSEHGVSDVKAAACDKLLATRVDARVSGKK 353
BLAST of mRNA_E-fasciculatus_F_contig12154.1674.1 vs. uniprot
Match: A0A7S0K9Z4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K9Z4_9STRA) HSP 1 Score: 168 bits (426), Expect = 5.840e-50 Identity = 86/134 (64.18%), Postives = 106/134 (79.10%), Query Frame = 1
Query: 1 KVVDTPGILDHPLEERNTIEMQAVTALAHLQCCVLYFIDISEQCGYTIKEQVSLFESIKPLFANKQLLVIANKTDVAPFADIKEEDRVSIERLADSAGVELHLMSNETEEGVQEVKTAACDKLLQARVDARMAG 402
+V+DTPGILDHPLEERNTIEMQA+TALAHL C VL+FIDISEQCGYTI++QVSLF+SI+PLF NKQLL++ NK D P+ ++ + + IE L + L MSN +EEGV VK ACDKLL ARVD+R++G
Sbjct: 70 QVIDTPGILDHPLEERNTIEMQAITALAHLTCSVLFFIDISEQCGYTIEQQVSLFKSIQPLFVNKQLLIVVNKIDQQPWNTLEADKKNLIEELVEG-NTNLIEMSNVSEEGVSLVKATACDKLLAARVDSRVSG 202
BLAST of mRNA_E-fasciculatus_F_contig12154.1674.1 vs. uniprot
Match: A0A7S3MAG3_9STRA (Nucleolar GTP-binding protein 1 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAG3_9STRA) HSP 1 Score: 178 bits (451), Expect = 6.250e-50 Identity = 86/132 (65.15%), Postives = 107/132 (81.06%), Query Frame = 1
Query: 1 KVVDTPGILDHPLEERNTIEMQAVTALAHLQCCVLYFIDISEQCGYTIKEQVSLFESIKPLFANKQLLVIANKTDVAPFADIKEEDRVSIERLADSAGVELHLMSNETEEGVQEVKTAACDKLLQARVDARM 396
+VVDTPGILD PLEERNTIEMQA+TALAHLQCCVLYF+D+SEQCGYTI Q+ LFESI+PLFANKQ++++ANKTDV + + + R IE +A AG EL MSN E+ + +K AACDKLL+ARVD+++
Sbjct: 237 QVVDTPGILDRPLEERNTIEMQAITALAHLQCCVLYFLDVSEQCGYTIDAQLRLFESIRPLFANKQVMMVANKTDVIAYDKLSADTRARIEEVARKAGAELVPMSNVNEDNISYLKVAACDKLLEARVDSKL 368 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12154.1674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12154.1674.1 >prot_E-fasciculatus_F_contig12154.1674.1 ID=prot_E-fasciculatus_F_contig12154.1674.1|Name=mRNA_E-fasciculatus_F_contig12154.1674.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=137bp KVVDTPGILDHPLEERNTIEMQAVTALAHLQCCVLYFIDISEQCGYTIKEback to top mRNA from alignment at E-fasciculatus_F_contig12154:519..1497+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12154.1674.1 ID=mRNA_E-fasciculatus_F_contig12154.1674.1|Name=mRNA_E-fasciculatus_F_contig12154.1674.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=979bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12154:519..1497+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12154:519..1497+ >mRNA_E-fasciculatus_F_contig12154.1674.1 ID=mRNA_E-fasciculatus_F_contig12154.1674.1|Name=mRNA_E-fasciculatus_F_contig12154.1674.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=822bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12154:519..1497+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |