mRNA_E-fasciculatus_F_contig1215.1671.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-fasciculatus_F_contig1215.1671.1
Unique Name	mRNA_E-fasciculatus_F_contig1215.1671.1
Type	mRNA
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)

Homology

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BLAST of mRNA_E-fasciculatus_F_contig1215.1671.1 vs. uniprot
Match: D8LCM6_ECTSI (Methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCM6_ECTSI)

HSP 1 Score: 635 bits (1637), Expect = 1.740e-223
Identity = 330/374 (88.24%), Postives = 347/374 (92.78%), Query Frame = 1

Query:   88 MALRFGNAVLVRSGLLHRANLPVATALRTRLAFST-GATGKGGDDAAVLEENKAKINAAWNSSAEAYVGNIQDDASSASLKVSQGMNVGYKLATRIVTSAYDKVEPKEPGAPVVLDVASAGGEPAITIAKAMPGATIHATDFAPAMMDLIRKRAAEGGVSNVTASVADGEALTGFGDESVDAVTCTWGMLFMPNWQSAVQEFSRVLKKDGVVVVTLWEGHEGSVFQLMRSVLETLIPGFEPLIDAEALGKDGGSAVVEEMKAAGLCDVSASKFSVPVVLSADARPRDIWEYYTESSPLGQTMSALEEKGRTNVRQEAMDMFEGAMNKEWAEGRNPLGLQKEDDGVDGGSSPAASRPPRIYYVRALVVVGRKVGG 1206
            MALRFG+AVLVRSGLLHR+NLP A  +RTRLAFST GAT KGGDDAAV EENKAKINAAWNSSAEAYVGN+QD ASSASLKVS GMNVGYKLATRIVTS YDKV+PKEPG  VVLDVASAGGEPAITIAKAMPGAT+HATDFAPAMMDLIRKRAAE GVSNV ASVADGEALTGFGD SVDAVTCTWG+LFMPNWQ A+QEFSRVLK+DGVV VTLWE  EGSVFQ MR+V+ETL+PGF+ LIDAEALG+DGGSAVVEEMKAAGLCDVSASKFSVPVVLSADARPRDIWE+YTESSPLGQTMS LE+KGRTNVRQEAMD+FE AMNKEW EGR PLGLQKEDD V GGSSPAASRPPRIYYVRALVVVGRK GG
Sbjct:    1 MALRFGSAVLVRSGLLHRSNLPAARGVRTRLAFSTVGATAKGGDDAAVQEENKAKINAAWNSSAEAYVGNVQDGASSASLKVSSGMNVGYKLATRIVTSPYDKVQPKEPGKQVVLDVASAGGEPAITIAKAMPGATVHATDFAPAMMDLIRKRAAEEGVSNVVASVADGEALTGFGDGSVDAVTCTWGLLFMPNWQRAIQEFSRVLKRDGVVAVTLWERQEGSVFQRMRNVVETLVPGFQLLIDAEALGEDGGSAVVEEMKAAGLCDVSASKFSVPVVLSADARPRDIWEHYTESSPLGQTMSTLEKKGRTNVRQEAMDIFEDAMNKEWVEGRTPLGLQKEDDAVAGGSSPAASRPPRIYYVRALVVVGRKTGG 374

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BLAST of mRNA_E-fasciculatus_F_contig1215.1671.1 vs. uniprot
Match: A0A6H5JCB5_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCB5_9PHAE)

HSP 1 Score: 470 bits (1209), Expect = 1.780e-158
Identity = 273/407 (67.08%), Postives = 297/407 (72.97%), Query Frame = 1

Query:   88 MALRFGNAVLVRSGLLHRANLPVATALRTRLAFSTGATGKGGDDAAVLEENKAKINAAWNSSAEAYVGNIQDDASSASLKVSQGMNVGYKLATRIVTSAYDKVEPKEPGAPVVLDVASAGGEPAITIAKA--------MPGATIHATDFAPAMMDLIRKRAAEGGVSNVTASVADGEALTGFGDESVDAVTCTWGMLFMPNWQSAVQEFSRVLKKDGVVVVTLWEGHEGSVFQLMRSVLETLIPGFEPLIDAEALGKDGGSAVVEEMKAAGLCDVSASKFSVPVVLSADA-----------RP--RDIWEYY----------TESSPLG---QTMSALEEKGRTNVRQEAMDMFEGAMNKEWAEGRNPLGLQKEDDGVDGGSSPAASRPPRIYYVRALVVVGRKVGG 1206
            MALR G+AVLVR GLL R+N P AT +R RLAFSTGA  KGGDDAAV EENKAKINAAWNSSAEAYV NIQD ASSASLKVS GMNVGYKLATRIVTS YDKV+PKEP   VVLDVASAGGEPAITIAKA        MPGATIHATDFAP M+DLIRKRA E GVSNV ASVADGEALTGFGDE+VDAVTCTWG+LFMPNWQ A+QE                    GSVFQ +R+V+ETL+PGF+ LIDAEALG+DGGSAVVEEMKA+     +       + LS  +           RP  R  W             T  +P     QTMS LE+KGRTN+RQEAMD+FE +MNKEWAEGR PLGLQ E D + GGSSP ASRPPRIYYVRALVVVGRKVGG
Sbjct:    1 MALRLGSAVLVRGGLLQRSNFPAATGVRIRLAFSTGAKNKGGDDAAVQEENKAKINAAWNSSAEAYVRNIQDGASSASLKVSSGMNVGYKLATRIVTSPYDKVQPKEPEKQVVLDVASAGGEPAITIAKAREGIYRKAMPGATIHATDFAPVMIDLIRKRAVEEGVSNVVASVADGEALTGFGDETVDAVTCTWGLLFMPNWQRAIQE--------------------GSVFQRIRNVVETLVPGFQLLIDAEALGEDGGSAVVEEMKASWTSPRTTGAIKPWLTLSIGSSFRLPGSATSRRPSFRCPWSSRPTRGLGTSGSTTPNPRHSGQQTMSTLEKKGRTNIRQEAMDIFEDSMNKEWAEGRTPLGLQNEGDDLAGGSSPTASRPPRIYYVRALVVVGRKVGG 387

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BLAST of mRNA_E-fasciculatus_F_contig1215.1671.1 vs. uniprot
Match: I0Z1C2_COCSC (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z1C2_COCSC)

HSP 1 Score: 119 bits (299), Expect = 2.190e-26
Identity = 83/257 (32.30%), Postives = 131/257 (50.97%), Query Frame = 1

Query:  256 AAWNSSAEAYVGNIQDDASSASLKVSQGMNVGYKLATRIVTSAYDKVEPKEPGAPVVLDVASAGGEPAITIAKAMPGATIHATDFAPAMMDLIRKRAAEGGVSNVTASVADGEALTGFGDESVDAVTCTWGMLFMPNWQSAVQEFSRVLKKDGVVVVTLW-EGHEGSVFQLMRSVLETLIPGFEPLIDAEALGKDGGSAVVEEMKAAGLCDVSASKFSVPVVLSADARPRDIWEYYTESSPLGQTMSALEEKGRTNV 1023
            AAW +SAE Y  ++ +           G  +   L    V +A ++V+    G P +LDVAS  GEP I++AK  PG T+  TD A  M+   + RA    + N   +VADGE L+ FGD + D VTC  G++FMPN++ A+ EF RVLK DG+ +V+ W E  + +V  LM +V   + P      D   LG      ++  ++ AG  + S  + +VP+       P++      ++  + + +  L E+G  +V
Sbjct:   14 AAWGNSAEQYAADVHE-----------GAGIMMPLIAAYVETAKEEVK----GNPQILDVASGTGEPGISLAKLFPGGTVTITDIAEGMIAGAKGRADRLSLKNARFAVADGENLSQFGDATFDVVTCNAGLMFMPNYERALAEFRRVLKPDGLAMVSAWGEEEQTNVASLMLAVQRAVAPNDSLFADPNILGSR--EKLLHSLERAGFSNNSCREVNVPMRF-----PKEKVRGMLQNPVIAELLDRLIERGEKDV 248

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BLAST of mRNA_E-fasciculatus_F_contig1215.1671.1 vs. uniprot
Match: A0A835YPT1_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPT1_9STRA)

HSP 1 Score: 117 bits (294), Expect = 6.640e-25
Identity = 90/290 (31.03%), Postives = 137/290 (47.24%), Query Frame = 1

Query:  403 KEPGAPVVLDVASAGGEPAITIAKAMPGATIHATDFAPAMMDLIRKRAA----EGGVSNVTASVADGEA-------------------LTGFGDESVDAVTCTWGMLFMPNWQSAVQEFSRVLKKDGVVVVTLW----EGHEGSVFQL----------MRSVLET-----------------------------------LIPGFEPLIDAEALG--KDGGSAVVEEMKAAGLCDVSASKFSVPVVLSADARPRDIWEYYTESSPLGQTMSALEEKGRTNVRQEAMDMFE 1050
            K  G P VLDVASA GEPA++IA+ +P AT+HATD++P M++ +  R A      G++NV   VADGE+                   L+ F D S+DA+TC++G++FMP WQ A++EF RVLK +G+ ++ +W    E    +  +L          +RS +                                     +I  F+ L++  +LG     G  VV+EM+ AG   +    F V V   A A   + W  +   +P   T+ ALE +GR  +  +A  +FE
Sbjct:   71 KGDGPPSVLDVASAAGEPAVSIARLLPQATVHATDYSPGMVEALNTRVAVLRETEGLANVHTGVADGESDILTLLCAVVAACICRAQNLSQFEDASMDAITCSFGIMFMPAWQKAIREFYRVLKPNGIAIINVWGPEQEAQRCACIRLWLLPQHNANDVRSRIRPPPQCHLVSNSSANRCPGLLQRSPSHMPDENITHVFVITDFKVLLNPCSLGGGHPHGQHVVDEMQKAGFVQMQHMFFEVQV---AAASLDEAWHRHLLGTPFAATLQALERQGRPRIHADARALFE 357

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BLAST of mRNA_E-fasciculatus_F_contig1215.1671.1 vs. uniprot
Match: A0A2P6TSJ3_CHLSO (Methyltransferase type 11 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TSJ3_CHLSO)

HSP 1 Score: 108 bits (270), Expect = 1.930e-22
Identity = 56/121 (46.28%), Postives = 83/121 (68.60%), Query Frame = 1

Query:  424 VLDVASAGGEPAITIAKAMPGATIHATDFAPAMMDLIRKRAAEGGVSNVTASVADGEALTGFGDESVDAVTCTWGMLFMPNWQSAVQEFSRVLKKDGVVVVTLWEGHEGSVFQLMRSVLET 786
            +LDVASA GEPA+T+A A+P A + +TD A A ++L + RAA  G++NV+   AD E L  +GD S DAVTC+ G++FMP+++ AV+EF+RVLK  G+    +W+  + + F L+   L T
Sbjct:   57 ILDVASASGEPALTLAVALPQAQLVSTDLAHAFLELGKSRAARAGLTNVSFETADAEDLHRYGDASFDAVTCSLGLMFMPSFELAVKEFARVLKPGGLFAAAVWQSEDRAPFFLVTKKLGT 177

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BLAST of mRNA_E-fasciculatus_F_contig1215.1671.1 vs. uniprot
Match: I0Z1C3_COCSC (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z1C3_COCSC)

HSP 1 Score: 107 bits (266), Expect = 2.080e-22
Identity = 73/225 (32.44%), Postives = 113/225 (50.22%), Query Frame = 1

Query:  259 AWNSSAEAYVGNIQDDASSASLKVSQGMNVGYKLATRIVTSAYDKVEPKEPGAPVVLDVASAGGEPAITIAKAMPGATIHATDFAPAMMDLIRKRAAEGGVSNVTASVADGEALTGFGDESVDAVTCTWGMLFMPNWQSAVQEFSRVLKKDGVVVVTLWEGHEGS-VFQLMRSVLETLIPGFEPLIDAEALGKDGGSAVVEEMKAAGLCDVSASKFSVPVVLSAD 930
            AW + AE Y  N+ +           G  +   L      +A  +V+    G P++LDVAS  GEP I++A+  P  ++  TD A  M+   + RA    V N +  VAD E L+ F D + D VTC  G++FMPN++ A+ EF RVLK DG+ +++ W   E + +  LM  +   + P      D   LG      +V  ++ AG  +VS  + +VP+ + AD
Sbjct:   15 AWGNGAELYAANLHE-----------GSGIMMPLIAAYAETARAEVK----GNPLILDVASGTGEPGISLARQFPNGSVIMTDLADGMIAGAKGRAERLSVKNASFDVADAEDLSQFKDATFDVVTCNCGLMFMPNYERALAEFRRVLKPDGLALMSAWGLPEHTQLISLMLGMQAAVAPNDSLFADPNILGSR--EKLVHAVERAGFSNVSCREVNVPMHIPAD 222

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BLAST of mRNA_E-fasciculatus_F_contig1215.1671.1 vs. uniprot
Match: A0A2P6VE33_9CHLO (Methyltransferase type 11 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VE33_9CHLO)

HSP 1 Score: 105 bits (262), Expect = 1.700e-20
Identity = 68/178 (38.20%), Postives = 94/178 (52.81%), Query Frame = 1

Query:  424 VLDVASAGGEPAITIAKAMPGATIHATDFAPAMMDLIRKRAAEGGVSNVTASVADGEALTGFGDESVDAVTCTWGMLFMPNWQSAVQEFSRVLKKDGVVVVTLWEGHEGSV--FQLMRSVLETLIPGFEPLIDAEALGKDGGSAVVEEMKAAGLCDVSASKFSVPVVLSADARPRDIW 951
            +LD+ASA GEPA T+A A+P A + +TD A   ++L + RAA  G++NVT   AD E L  +GD S DAV C+ G++FMPN++  +QE  RVLK  G    T W G E  V  FQL + +     P   P     A+        VE    AGL DV+  +  +   +     P  +W
Sbjct:   65 ILDLASASGEPAATLAAALPQAQVVSTDLAAPYLELGKARAARLGLANVTFETADAEDLHRYGDASFDAVACSLGVMFMPNYELCLQEVRRVLKPGGRFAATFW-GPEDKVPFFQLTKELALEYDPNLPPAASQVAVRFGNPQPFVEAAGEAGLVDVNTRELQIEFFM-----PDHVW 236

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BLAST of mRNA_E-fasciculatus_F_contig1215.1671.1 vs. uniprot
Match: A0A835YK25_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK25_9STRA)

HSP 1 Score: 103 bits (256), Expect = 7.400e-20
Identity = 77/253 (30.43%), Postives = 120/253 (47.43%), Query Frame = 1

Query:  232 EENKAKINAAWNSSAEAYVGNIQDDASSASLKVSQGMNVGYKLATRIVTSAYD-KVEPKEPGAPVVLDVASAGGEPAITIAKAMPGATIHATDFAPAMMDLIRKRAAE----GGVSNVTASVADGEA---------------------------------------------------LTGFGDESVDAVTCTWGMLFMPNWQSAVQEFSRVLKKDGVVVVTLWEGHEGSV--FQLMRSVLETLIPGFEPLID 816
            +E KA+   A+ S+A  Y+G+ +  A    + V     V   +A +  TS      + K    P +LD+A+A GEP++T+AK MP A I ATD++  M++ +R R A+     G++NV   VADGE+                                                   L+ F D S+D VTCT G++FMPNWQ A+ E  RVLK +G+ + T+W   E +   + L R V++ + PG++  +D
Sbjct:    8 DERKARAAEAFGSAASTYLGDSKWKAPMTPMYVRAAEVVTKVVAEQHSTSCDGTSADDKSQWTPTILDIAAASGEPSVTLAKIMPRAKIIATDYSAGMIEAMRARIAKLRDSDGIANVHVDVADGESXXXXXXXXXXXXXXXXXXXXXXXAADAGRPFDXXXXFVAHTQPDSMPQQANLSQFEDNSMDIVTCTLGLMFMPNWQKAIAEAYRVLKPNGLYLATVWGPKEEASERYSLTRGVIDAIAPGYKMPMD 260

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BLAST of mRNA_E-fasciculatus_F_contig1215.1671.1 vs. uniprot
Match: A0A5J4Y136_9CHLO (Methyltransf_11 domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y136_9CHLO)

HSP 1 Score: 104 bits (259), Expect = 8.330e-20
Identity = 74/220 (33.64%), Postives = 119/220 (54.09%), Query Frame = 1

Query:  424 VLDVASAGGEPAITIAKAMPGATIHATDFAPAMMDLIRKRAAEGGVSNVTASVADGEALTGFGDESVDAVTCTWGMLFMPNWQSAVQEFSRVLKKDGVVVVTLWEGHEGSVFQLMRSVLETLIPGFEPLIDAEALGKDGGSAV--VEEMKAAGLCDVSASKFSVPVVLSADARPRDIWEYYTESSPLGQTMSALEE---KGRTNVRQEAMDMFEGAMNKE 1068
            VLD+AS  G PA+ + +A+P A++ ATD +PA + LI + AA  GV+NVTA  AD + L  F D + DAVTC++G++FMP+ Q A+QE  RVLK  G+ V T+W   E   F  M S +   I G +    +       G+ V  ++++K A   +   + +S P+         D+  +  +  P GQ+ S L++    G+ N+  EA  +    + ++
Sbjct:  295 VLDLASNAGSPAVPLGQAIPNASVVATDLSPASVSLISEYAASEGVTNVTAQPADAQHLQEFDDNTFDAVTCSYGLMFMPDHQKALQEAHRVLKLGGLYVATVWAPLEHYQFGQMFSEVARRIAGDQGPPPSPYTPWRFGNPVQLLQDLKGAHFSNAHCTAYSHPMTFPL----ADLVAF--QLGPNGQSRSLLDKLKATGKENMYDEAPQVMRAVLTEQ 508

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BLAST of mRNA_E-fasciculatus_F_contig1215.1671.1 vs. uniprot
Match: A0A5J4XFB5_9CHLO (Methyltransf_25 domain-containing protein n=2 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XFB5_9CHLO)

HSP 1 Score: 95.9 bits (237), Expect = 1.520e-18
Identity = 53/123 (43.09%), Postives = 75/123 (60.98%), Query Frame = 1

Query:  424 VLDVASAGGEPAITIAKAMPGATIHATDFAPAMMDLIRKRAAEGGVSNVTASVADGEALTGFGDESVDAVTCTWGMLFMPNWQSAVQEFSRVLKKDGVVVVTLW----EGHEGSVFQLMRSVL 780
            VLD+AS+ G PA+ +AK +P  +I ATD +PA   L+ K AA  GV+NV A   D + LT F   S  AVTC++G +FMP+   A+QE +RVL+  G++V T+W    + H    FQ +   L
Sbjct:    9 VLDLASSFGRPAVPLAKELPHVSISATDLSPASAPLVHKYAASQGVTNVIAQTVDAQDLTDFSSNSFAAVTCSYGFMFMPDLDKALQEANRVLQPGGLLVATVWAEVEKCHNMQAFQGLAKAL 131

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig1215.1671.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig1215.1671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LCM6_ECTSI	1.740e-223	88.24	Methyltransferase n=1 Tax=Ectocarpus siliculosus T...	[more]
A0A6H5JCB5_9PHAE	1.780e-158	67.08	Methyltransf_11 domain-containing protein n=1 Tax=...	[more]
I0Z1C2_COCSC	2.190e-26	32.30	S-adenosyl-L-methionine-dependent methyltransferas...	[more]
A0A835YPT1_9STRA	6.640e-25	31.03	S-adenosyl-L-methionine-dependent methyltransferas...	[more]
A0A2P6TSJ3_CHLSO	1.930e-22	46.28	Methyltransferase type 11 n=1 Tax=Chlorella soroki...	[more]
I0Z1C3_COCSC	2.080e-22	32.44	S-adenosyl-L-methionine-dependent methyltransferas...	[more]
A0A2P6VE33_9CHLO	1.700e-20	38.20	Methyltransferase type 11 n=1 Tax=Micractinium con...	[more]
A0A835YK25_9STRA	7.400e-20	30.43	S-adenosyl-L-methionine-dependent methyltransferas...	[more]
A0A5J4Y136_9CHLO	8.330e-20	33.64	Methyltransf_11 domain-containing protein n=1 Tax=...	[more]
A0A5J4XFB5_9CHLO	1.520e-18	43.09	Methyltransf_25 domain-containing protein n=2 Tax=...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig1215	contig	E-fasciculatus_F_contig1215:2052..9433 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	641.7
Seed ortholog evalue	2.1e-181
Seed eggNOG ortholog	2880.D8LCM6
EggNOG free text desc.	ubiE/COQ5 methyltransferase family
EggNOG OGs	2CZJF@1,2SANJ@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	mitochondrion
Ec32 ortholog description	Methyltransferase type 11
Ec32 ortholog	Ec-03_002320.1
Exons	10
Model size	1967
Cds size	1122
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig1215.1671.1	prot_E-fasciculatus_F_contig1215.1671.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	polypeptide	E-fasciculatus_F_contig1215 2139..8675 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927724.5710013-UTR-E-fasciculatus_F_contig1215:2051..2138	1622927724.5710013-UTR-E-fasciculatus_F_contig1215:2051..2138	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1215 2052..2138 +
1695995666.7215407-UTR-E-fasciculatus_F_contig1215:2051..2138	1695995666.7215407-UTR-E-fasciculatus_F_contig1215:2051..2138	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1215 2052..2138 +
1622927724.75196-UTR-E-fasciculatus_F_contig1215:8675..9433	1622927724.75196-UTR-E-fasciculatus_F_contig1215:8675..9433	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1215 8676..9433 +
1695995666.8479972-UTR-E-fasciculatus_F_contig1215:8675..9433	1695995666.8479972-UTR-E-fasciculatus_F_contig1215:8675..9433	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	UTR	E-fasciculatus_F_contig1215 8676..9433 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-fasciculatus_F_contig1215:2052..9433+
coding sequence from alignment at E-fasciculatus_F_contig1215:2052..9433+

protein sequence of mRNA_E-fasciculatus_F_contig1215.1671.1

>prot_E-fasciculatus_F_contig1215.1671.1 ID=prot_E-fasciculatus_F_contig1215.1671.1|Name=mRNA_E-fasciculatus_F_contig1215.1671.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=374bp
MALRFGNAVLVRSGLLHRANLPVATALRTRLAFSTGATGKGGDDAAVLEE
NKAKINAAWNSSAEAYVGNIQDDASSASLKVSQGMNVGYKLATRIVTSAY
DKVEPKEPGAPVVLDVASAGGEPAITIAKAMPGATIHATDFAPAMMDLIR
KRAAEGGVSNVTASVADGEALTGFGDESVDAVTCTWGMLFMPNWQSAVQE
FSRVLKKDGVVVVTLWEGHEGSVFQLMRSVLETLIPGFEPLIDAEALGKD
GGSAVVEEMKAAGLCDVSASKFSVPVVLSADARPRDIWEYYTESSPLGQT
MSALEEKGRTNVRQEAMDMFEGAMNKEWAEGRNPLGLQKEDDGVDGGSSP
AASRPPRIYYVRALVVVGRKVGG*

mRNA from alignment at E-fasciculatus_F_contig1215:2052..9433+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-fasciculatus_F_contig1215.1671.1 ID=mRNA_E-fasciculatus_F_contig1215.1671.1|Name=mRNA_E-fasciculatus_F_contig1215.1671.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=7382bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1215:2052..9433+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GAAGTCTACCGCGCAACACGCTGCGGCACGCGCCCCGTGATCACACACGC
ACCTGCCCACCTCTGTCAAAAGCAGTGTATACCCACGATGGCTCTCCGTT
TCGGCAATGCGGTCCTCGTCAGGAGCGGCTTGCTTCACCGCGCCAATCTC
CCTGTAGCAACGGCACTCCGAACCAGGTGCAACTACCAATGCAACCTCCT
TGTTTGTAGCCAGTGTGCATGTGATGACTTCAAACTTGCACCCAGGAGCA
GACGACGAGTTTGCACAGAAGTACGCAAAGGTTGAGGCAAGACAGCTCTC
TCGGCCCGCAATGTACCACCAACGTCTACCGGCGAGGATCCGCATCCTCG
TGGCCGGTCCTCCTTGGTTTGTAAGAAGTCTCTCTTGTTGGGTGTCAACA
CGGCCCACAGCAAAACGTGAAATAACAGACTTGAGGGACATCGCAAAGCA
GGCGCTTTGTGTGTGTACAGCAGACTGTTGCATACTGAGCGCTACAATGT
CCACATACACCAGCGCCTGATCGCAGCAGGTGGCTCTCTACCCCCGTTGT
CTGCCTGGCTCGATAGCTCCAGGGTTGTGAGAAAAATTGCTGTTAGCTGC
GGGTCGTTTTTTGTTTGTTTGTTCCGCCAAACGGTTCCGCACATCGGGCG
CCCGCTTGCTGTCAGACCGGCTCTATCCGTATAAAAATCACGCGACAAAG
ATCGTGCATTTAACTTAAAAACTGGCTGTGGTCACGTATTCAACGGTATC
GTGCGGTGTTCGTCCTTTCACTGGTTTGTCAAATGTCGGCCAACAGCAGT
TTAGTGCAGCCTAGACAGCAACAGCAGTATTACCAAAGCTTATGATCATT
CCGACGGCGGCGCGCGTTCAGGTACCAGGTATTATACACATACATAAAGG
ACCCGAGCGGTCGACGAACCCGCGATCAATCGAGCAACTTTTGTACCTAA
AGAGAACACATCGTATCTCGATGCGTTCGCTATGCTAGACTCCGCGGCAG
GGCGGGTACACGTATGTACAATATGCTCACCGCAGATGATGTTGTTTGAA
CCCTCGCCCCCATAGCCGCTGTTCAAGAGCATATCCTATGTAGACTACAA
CGACAAGGAATCACCGAAATTGGCAACGCGAAGCGCCGACGACCCTCATT
CAAGAAAGCAAGGCGCTTCCCACTGCTGCTGTACTTTCAAAGCCGCTGGT
ACAGACAACAGTAAGTTGTGGCGACACCCGTTCTCCTCTGTCTGCATGGT
TTACACGCACACAAGTGGCGGTCTTCCCTCCGACGACATCGTTGCTGATG
ATGTATTTCTTTGTTTCCTCTGGTCATGAAAGACTGGCGTTTTCGACGGG
GGCTACAGGCAAGGGAGGAGATGACGCCGCCGTACTCGAGGAAAACAAGG
TGGGGATCCACGTACGACCGACCGGCAGAGCACTTGGGGGGTACTTCTTG
AAACGATCAAGGTTTCACGTAACCCTGAACACTCTTCTGCCGGGTGCTGA
TGTTAGACATAGTCTATTGCTCAGTTCTGGACGAATGCACGTAACTACAG
GGCGTTTACGTGTGCGATCTGCCTGCATGATTACATCGCGCTCAACGTGT
GCCCCCCCCCGCAATTGGTCCCTAACCTATTCCCTACACCGAGGAGATGA
CGCATCAGGGAACCGAAGTTCTGTGCGTCTCCGAAAAAGCATGCTTTGGA
CGGGATCCCTTGGAAACGATTGTTGGTTGTCGTTGGTACCTCACATTACT
CCCTGTGTGTACCCTGGCGGAGAAGTTGTTAGGTCTGATTTTCACTGCTG
CAGCTATTGTTGACGCCCTGTTGCTAGCCTAGGGAAGCGTTTCGTGCGTG
TTGCGCGAGGTTCTTGATATCCTCGTCCAGAATGGTACGTTTATTTTTGC
GCGTTCGGAACAGCTAAAACTTTACTCCGCTCTCTGCTGATGCCTCCCAC
GCTTCGCCTATTTCCATGCGGCGGCGCCAACCGACATCCCGTTGGTCGCA
GGCAAAGATCAACGCGGCTTGGAACTCCTCCGCGGAGGCGTACGTCGGGA
ATATTCAGGATGATGCTTCTTCCGCTTCCCTCAAAGTATCCCAGGGCATG
AATGTCGGCTACAAGCTTGCGACGAGGATCGTCACGTCTGCGTACGACAA
GGTACGGCACCTGCAGAAGTAGATGCGTCCTGCTGTCCTGCCATGCCCGC
TGGTGCGTCGCTAAGCAGACAAGCCTGCCAGAGTTTGTTGATGTTGTTGT
TGTTGTTGTTGTTGCTATTCAAAGCTTTTTTTGTCACTGGTGGGTTCCTT
TTGTTTCGTTGTTCACATCTATTTTTCTATGTCACGGCACCCCACAGGTG
GAGCCGAAGGAACCAGGAGCACCCGTGGTTCTCGACGTGGCCTCGGCCGG
GGGAGAGCCCGCGATCACCATCGCGAAGGCAAGAGGGAACATTCCGCTAG
GCCGTACCGCGCAAGCGCGCAAGATGAGACGCCAGAACCAAGGAACAACT
CGAGCTTACACCCCCCTGGGGCTCGGGTTTCCACTAACTTTTGTTGGGGT
CACCTTCGGGGGGTTGCTGGCGTTCTCCCCGTTTTACCCTGTAGTTATTG
GTATCGATACGGCGTACGGCAAGAGTTTTGAACCCGATGGGCTCATCATG
AATGGTTCGTCAGAAACGCCGTTTTTTTTGTTCATCACTTTAAACCAGAG
CTCACAACATTTCTGCTGATTTTACTCCGACCCGTGGTCGCACAGGAGGG
CTCCTCTCCCTTTCTTCCTCTCCTGCGGTACTCTTGCCTACATTTATTTC
GAAGAAGAGTTAGGCTCTCTCCTCCCTGTGTACACACGAACTAGCACTAC
CCACAACCAGGCACGCAAGCGAGAGAAAAACTCACGTTGCAAGAAAAGCT
CACTCACGCCGGGACTCGAACCCATGACCTGGAGCTAGAGGGTTAAGCGG
ATTCCCTACTAGACCACCCGGGCGACCGCCGATTGTCATTCCCAGTAGCC
TGTGGTTCCGGTTCCTAGCGTGTGTCGTGGTGGTGTTGTACGGCAGGTCT
ATACAGTTACCGCTTGGTTGTTTCCTCTTTGTTCTGCATGACGAGTCTTG
GCGCTACACCCGCCTCGCTCCCCACGAAAATGTTCCCGGACTGCCCAGGC
GATGCCTGGCGCTACGATCCACGCTACCGATTTCGCCCCGGCGATGATGG
ACCTCATCAGGTGATGACATCGTCGTGGTATCGAGTCACGTCGGCAGTGT
TCACGAGGGACGGCAGGGAAGGACAATGCAGTCCACGCCTCGTGCGATCC
AACTTGCTATACGCGAAGATGAAGAAAAAGGGCGGGCACAGCCGTCTTTT
TTGCCTGCAGATTGAGTCAACATTTAAGAGCAGGCAGTGCTGGGTGTTCG
TCGTGATAGGCTGTGCGCGATATATGACATTACCATGGTTGTTGGTGGAG
AAGACTGTGCTGCACCAGTTGCACGGAGAAAGGGGAATCCATCGACTTGT
TTATCCTCTTTTCGCGCAGTCATGCCCTGATATATTCCTCCGTTCCGCCC
CTTGGAAGCACCTGTTTGGGACAAAACCTCTCTGTGTTTCGTAGTTCCTG
ATGCAGAGGTGGATACGTGTCGGAGTCATCCGCTCTTCGCGCCTAGTGTC
ATAGGTAGTCAACCGTTAACCGGAGCGCAACCGATCAGCCTTTAACGACG
AAACTCCCCTCCTCTCGCGGGCATGCGAAGGAAGAGAGCTGCCGAAGGAG
GGGTCTCGAACGTAACGGCGAGCGTGGCAGACGGGGAAGCGTTGACCGGG
TTCGGGGACGAGTCGGTGGACGCGGTGACGTGCACGTGGGGCATGCTCTT
CATGCCAAACTGGCAGAGTGCCGTCCAGGTGTGTAACCGGGGTTTGCTGC
TACAGTGTTGTGGGAACCGGCACATACATATAGGTTTCCGGTGGCCTGGG
GCTTGCGGCTCTTGCTGCTCACGTTTTTTTTTTGTGCTAGCGACGGGCTG
ACTGATCCCATCCACCACCAAACGTGTTGGCTGGGGCAGATGGTGAGATC
TGTTTGATCTTGCTGCTATTCGCGCTATTCTGTTCTTTGGGAACATTGTG
TGTGAAAAAGCTGGCGAAAAAGCCTCGCAACCCCGCGCGATTAATGCCTC
TAGTAGTGGGATTTGTTTTATCTTACCTATTGACGGGAGTGAGTAGGAGT
CCGCTAGGCAACGATGCTCGCACTGGAGTGGAAACCGCAGGAGGCACGAC
TCGTAGCGGTATTTGCGTCCTCTTGCCGCGAGCACCGTAAATCTGGACAC
TGGACCTTGTCGTCGAACCTGCTCCACGCCCCCTCATGCCGAGGGGACCG
GCAGACGAGGCGTTTGCCCGGTATTACTCGCTATAAGGCTGACGTCTTTT
AATCTGAAAGCCGATTTGGCGCGGTTTGTGCAAGATAAAGAAACACACAC
GCATGTCACCCTCACAAGCGACTCCCCGCGCCCTCTCTTGATGTTTCGTG
CTGTAACGTCGCCGTTGCTTGATGTCTGTCGGTCATACCAGGAGTTTTCT
CGCGTCCTTAAGAAGGACGGGGTGGTGGTGGTGACGCTGTGGGAGGGGCA
TGAAGGCTCGGTATTCCAGCTCATGCGCAGCGTGTTGGAGACCCTCATTC
CCGGTAAGCGTGGGTGGTTTCTTCCGTCCAACTAGGAGCGGAGTCGACCC
GCTGCTGTTGGTCGTAAGTATCTTCCTGAATTTGCTAGCACCTTTCCTTC
GAGTTTCGAGGGAGGTGGCCCGCACAAAGGCGTTTTTGGTGCTGCCGTGC
CGCATGCATCAACCCGAAAGGCGATCGAACGCCTTTGCTCCAACGGCTCA
GTACGGAGGTGGGCCGCCCCGAGGTGATTTTGCGTCGCTCCAGGTCTGGT
CGAAGCTGTGTCCTGATCGCTGGCGGGCGCGCGTGTGTCACGCTTGTTCG
CTCCCGATTCACAGGTTTCGAACCGCTGATCGACGCTGAAGCGCTCGGCA
AGGACGGGGGATCAGCGGTAGTGGAGGAGATGAAGGCTAGTCAGAGTTCG
CCGCGCAGTAAATACCGCCGTAGGGTATACTGTAGTTATTGCTGGCGTTG
TCTTGAGCCACTGCACGGTGCATAGCTCCATGTGTATCACCTATCTACTC
CGATACAACGTCGACTTCCGTGCCTTCACCGTTTGCCACCATTGGCGCAA
GCTGGCATGAACCGCGCACCAGTTCGTGAAAAGAAAATGCAACATTGCGT
ACGGAGAGCAGCACCGGGCCCAGAATTATTTCAGTGAATGAAGGAGCCAC
GGCGTTGTGGGGGTGAAATCATAGGTCGTGTGTTTTGTGCACGTGCCGCC
CGTTCGCAATGTCTAAGGCACCCCGACCCCCGGGCAGGGGATTGATTGCC
GGGCATCGTAGCATCTCTACATTTAGAGTCAACCTTGCCCGCATACGTCC
GTCAAATCTGTACAAGCCTTTTCGACTTTTTGTCTTGGCCGTGCAGCAAG
CTGAGCGCACCTGTAGTCAACAAAAATCCAGCGCTCCGGCTACCCCGCGC
GTATACATTGCTGTCGGATCACCTGGCTTTGCACCCTCAAGTTGCCGGTG
TTTCGTCATCCTTTCCACGCTGCAAAACGTTGAAAGTGTGTTTCCATTTT
TCCCCTCCGGGTCATGGAAGACGCGCACGCCCAGTTCCTCTCCGGAGAAG
TCAAACCATGGTTAACCCTTTCGATCGGCTCTTGCTCCTTCAGGCTGCTG
GGCTCTGCGACGTCTCCGCGTCCAAGTTTTCGGTGCCCGTGGTTCTCTCG
GCCGACGCACGCCCTCGGGACATCTGGGAGTACTACACCGAATCCTCGCC
ACTCGGGGCAAGTTGAAGCGCCGCGAGGCGTTTGTGATTTGAGTAAAAGG
GCATGGCCGAACGCATGTGCAGATAGGCGTTTGCGCCTTGAACGAAGGAC
AGACGCATGTTGAACCCACATATTTGCATCTGTCGCTCAGCTTTTGACCT
GTTAGGTGCGTCCCGCCTGTGCCCCCCCGCAACCGTTTCGCATTGAGGGG
GGACGCACGCTAAGCATCCCCCCCCTACACTGATACGCAGGTCGACCCGC
TCTTTTGCCTCGTTTCTTTGACCGCCCATGATAACATGCATGTTTCATCT
TCAGCGGGCGTGGCGTTCTCTTACCTCCCATGCTTTTGTATCGTACTGAC
ATTTCCGGTTGCCGACGAATGGTTTCCGTCTTGGAAGTCAAGACCAGCCC
AGCGTTTCTCGCGGAGCACCGGTGCGTGAGATACGTGTGCAACAGTGCGG
CGACAGCCTGCTGCTTACCTACCACGGAGTTGTAAAAAGTAGCCCGTTTC
GACGCTTGCTTCCTGCCGCTTTTGCGCGTTGTCTCTGATCGATTAGCAAA
CCATGTCGGCCTTGGAGGAAAAAGGGCGGACAAACGTTCGGCAAGAAGCC
ATGGACATGTTCGAGGGCGCCATGAACAAGGAATGGGCCGAAGGACGAAA
CCCCCTCGGACTCCAGAAAGAAGACGACGGCGTCGACGGTGGAAGTTCTC
CGGCGGCATCTCGGCCGCCTCGCATTTACTACGTCCGAGCGCTCGTCGTC
GTGGGACGCAAGGTTGGCGGCTGAACGGGCCGAGAACATGGAACGGCACG
GTAGGTTTCCCGAACGGTGCTGACGTAGGCGTGCTGTTTTTGATATATTA
TTGATTCCTGCTTCTACTTCCGGGAGCGAGCCGTGAAAAGAGTATCGGAG
GATGTGTAGCGCCAGCGGGCAGCCCAGGATTTAATTTCCGGTAAATATTT
GCGCGTTGTTCAGGGCGTCGGCTCGGCATAGTTCCAAACAACGGACCGGA
CTGGTACGAGGAGACATGTGAATGCAAGAGGCGATCACTGCGCCAAGACG
TTTCTCCGTTGACAGCATCGTTTCGCGCGGCGGCAACGCTTTGAAATTTG
CGGGGGCGGTATCGTTTGGGCGGTCACGCTTGCGCACAACCTAGGTTGTG
TCGGTACAACTACCCATGCCCCACAACCATCATGGTGTTGGGAATATCGT
TCAGGGTGACTTCGACGAAGCAACTGTTTGCTTCACTTTTAGGCCTTGAG
TTAGTGCATCGGGTGGGCGTGCCTCCCCCGTTGCAGAGAAGTGTGACCCC
CAACGACTCTCTTTCTCGTTTCTAGATCAGCCTGACGTTTTTGGTTGCGA
ATGATACCTCACCGTTGTCGGAGTTCTGAGGAAAGGACGCAGGTGCCTAC
TGTGAGTCCTCCAAGTAGGATCCTGGCGTGATGGGTGGCGTGGTAGCGTA
CCCTGTCACTTCAATCCATCGGATACTGAGTCTCCGCAGTGGTGCTGTTT
GGCGTTCGAAAAACACTGTGATGCACGCCCAC

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1215:2052..9433+

>mRNA_E-fasciculatus_F_contig1215.1671.1 ID=mRNA_E-fasciculatus_F_contig1215.1671.1|Name=mRNA_E-fasciculatus_F_contig1215.1671.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2244bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1215:2052..9433+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCTCTCCGTTTCGGCAATGCGGTCCTCGTCAGGAGCGGCTTGCTTCA
CCGCGCCAATCTCCCTGTAGCAACGGCACTCCGAACCAGATGGCTCTCCG
TTTCGGCAATGCGGTCCTCGTCAGGAGCGGCTTGCTTCACCGCGCCAATC
TCCCTGTAGCAACGGCACTCCGAACCAGACTGGCGTTTTCGACGGGGGCT
ACAGGCAAGGGAGGAGATGACGCCGCCGTACTCGAGGAAAACAAGACTGG
CGTTTTCGACGGGGGCTACAGGCAAGGGAGGAGATGACGCCGCCGTACTC
GAGGAAAACAAGGCAAAGATCAACGCGGCTTGGAACTCCTCCGCGGAGGC
GTACGTCGGGAATATTCAGGATGATGCTTCTTCCGCTTCCCTCAAAGTAT
CCCAGGGCATGAATGTCGGCTACAAGCTTGCGACGAGGATCGTCACGTCT
GCGTACGACAAGGCAAAGATCAACGCGGCTTGGAACTCCTCCGCGGAGGC
GTACGTCGGGAATATTCAGGATGATGCTTCTTCCGCTTCCCTCAAAGTAT
CCCAGGGCATGAATGTCGGCTACAAGCTTGCGACGAGGATCGTCACGTCT
GCGTACGACAAGGTGGAGCCGAAGGAACCAGGAGCACCCGTGGTTCTCGA
CGTGGCCTCGGCCGGGGGAGAGCCCGCGATCACCATCGCGAAGGTGGAGC
CGAAGGAACCAGGAGCACCCGTGGTTCTCGACGTGGCCTCGGCCGGGGGA
GAGCCCGCGATCACCATCGCGAAGGCGATGCCTGGCGCTACGATCCACGC
TACCGATTTCGCCCCGGCGATGATGGACCTCATCAGGCGATGCCTGGCGC
TACGATCCACGCTACCGATTTCGCCCCGGCGATGATGGACCTCATCAGGA
AGAGAGCTGCCGAAGGAGGGGTCTCGAACGTAACGGCGAGCGTGGCAGAC
GGGGAAGCGTTGACCGGGTTCGGGGACGAGTCGGTGGACGCGGTGACGTG
CACGTGGGGCATGCTCTTCATGCCAAACTGGCAGAGTGCCGTCCAGGAAG
AGAGCTGCCGAAGGAGGGGTCTCGAACGTAACGGCGAGCGTGGCAGACGG
GGAAGCGTTGACCGGGTTCGGGGACGAGTCGGTGGACGCGGTGACGTGCA
CGTGGGGCATGCTCTTCATGCCAAACTGGCAGAGTGCCGTCCAGGAGTTT
TCTCGCGTCCTTAAGAAGGACGGGGTGGTGGTGGTGACGCTGTGGGAGGG
GCATGAAGGCTCGGTATTCCAGCTCATGCGCAGCGTGTTGGAGACCCTCA
TTCCCGGAGTTTTCTCGCGTCCTTAAGAAGGACGGGGTGGTGGTGGTGAC
GCTGTGGGAGGGGCATGAAGGCTCGGTATTCCAGCTCATGCGCAGCGTGT
TGGAGACCCTCATTCCCGGTTTCGAACCGCTGATCGACGCTGAAGCGCTC
GGCAAGGACGGGGGATCAGCGGTAGTGGAGGAGATGAAGGTTTCGAACCG
CTGATCGACGCTGAAGCGCTCGGCAAGGACGGGGGATCAGCGGTAGTGGA
GGAGATGAAGGCTGCTGGGCTCTGCGACGTCTCCGCGTCCAAGTTTTCGG
TGCCCGTGGTTCTCTCGGCCGACGCACGCCCTCGGGACATCTGGGAGTAC
TACACCGAATCCTCGCCACTCGGGGCTGCTGGGCTCTGCGACGTCTCCGC
GTCCAAGTTTTCGGTGCCCGTGGTTCTCTCGGCCGACGCACGCCCTCGGG
ACATCTGGGAGTACTACACCGAATCCTCGCCACTCGGGCAAACCATGTCG
GCCTTGGAGGAAAAAGGGCGGACAAACGTTCGGCAAGAAGCCATGGACAT
GTTCGAGGGCGCCATGAACAAGGAATGGGCCGAAGGACGAAACCCCCTCG
GACTCCAGAAAGAAGACGACGGCGTCGACGGTGGAAGTTCTCCGGCGGCA
TCTCGGCCGCCTCGCATTTACTACGTCCGAGCGCTCGTCGTCGTGGGACG
CAAGGTTGGCGGCTGACAAACCATGTCGGCCTTGGAGGAAAAAGGGCGGA
CAAACGTTCGGCAAGAAGCCATGGACATGTTCGAGGGCGCCATGAACAAG
GAATGGGCCGAAGGACGAAACCCCCTCGGACTCCAGAAAGAAGACGACGG
CGTCGACGGTGGAAGTTCTCCGGCGGCATCTCGGCCGCCTCGCATTTACT
ACGTCCGAGCGCTCGTCGTCGTGGGACGCAAGGTTGGCGGCTGA