mRNA_E-fasciculatus_F_contig12142.1669.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12142.1669.1
Unique NamemRNA_E-fasciculatus_F_contig12142.1669.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12142.1669.1 vs. uniprot
Match: D7G0L1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L1_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 5.060e-59
Identity = 100/106 (94.34%), Postives = 102/106 (96.23%), Query Frame = 1 
Query:   31 SPPLSI-QKPESMVAETLRMKGELEFTRLLRVDGRFEGELITDKGSLVVGPKGEVVGDLKNMQEVYVEGIVRGNVFANDVKIKNTGMLLGDVQCMCLTLDPTASIK 345
            SPP  + QKPESMVAETLRMKGELEFTRLLRVDGRFEGELITDKGSLVVGPKGEVVGDLKNMQEVYVEGIVRGNVFANDVKIKN GMLLGDVQCMCLTLDPTASI+
Sbjct:   82 SPPTLLEQKPESMVAETLRMKGELEFTRLLRVDGRFEGELITDKGSLVVGPKGEVVGDLKNMQEVYVEGIVRGNVFANDVKIKNAGMLLGDVQCMCLTLDPTASIR 187
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12142.1669.1 vs. uniprot
Match: A0A6H5L7F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F7_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 5.180e-30
Identity = 76/100 (76.00%), Postives = 80/100 (80.00%), Query Frame = 1 
Query:  346 GVTDTLTVNPSATARAAKYFPSATTAAGPSARKSNPSTPPPSYSSSVSSAATATRAQVDDSSKPLN--PVPSPPVTLKLPPVPAXXXXXXXGHHQGVTDT 639
            GVTDTLTVNPSATARAAKYF  A TAAGPS+RKS P T PPSYSSSV +A  ATRAQVD+SSKPLN  P PSPP+TLKLPP PA       GHHQGVTDT
Sbjct:   31 GVTDTLTVNPSATARAAKYFAPAATAAGPSSRKSIPPTLPPSYSSSVVTA--ATRAQVDESSKPLNSAPSPSPPITLKLPPAPAAA-----GHHQGVTDT 123
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12142.1669.1 vs. uniprot
Match: F0Y5F7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5F7_AURAN)

HSP 1 Score: 99.8 bits (247), Expect = 1.160e-20
Identity = 56/125 (44.80%), Postives = 83/125 (66.40%), Query Frame = 1 
Query:    1 PSLPPPPPLYSPPLSIQKPESMVAETLRMKGELEFTRLLRVDGRFEGELITDKGSLVVGPKGEVVGDLKNMQEVYVEGIVRGNVFANDVKIKNTGMLLGDVQCMCLTLDPTASIKGVTDTLTVNP 375
            P  PPP P  S  L   +PE+++ ETL ++G+L F RLLR+DG+FEGELI++ G L+VGP+GE+VGD+K M ++ V G V GN+  + V++  +  + GD+ C  L +DPT  + G    L +NP
Sbjct:  343 PVAPPPEPKKS--LLEMEPETVIGETLSIEGKLRFERLLRLDGKFEGELISE-GDLIVGPQGELVGDVKTMSDIVVFGKVIGNIAVDRVELCGSASIYGDITCKVLLMDPTVVLVG---NLNINP 461
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12142.1669.1 vs. uniprot
Match: A0A7S3ZTD0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTD0_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.170e-19
Identity = 48/108 (44.44%), Postives = 76/108 (70.37%), Query Frame = 1 
Query:   52 KPESMVAETLRMKGELEFTRLLRVDGRFEGELITDKGSLVVGPKGEVVGDLKNMQEVYVEGIVRGNVFANDVKIKNTGMLLGDVQCMCLTLDPTASIKGVTDTLTVNP 375
            +PE+++ ETL+++G L F RLLR+DG+FEG+L++  G L+VGP+GE+VGD+++M ++ V G V GN+  + +++     + GDV C  L +DPT  + G   TL VNP
Sbjct:  119 EPETVIGETLQIEGTLRFERLLRLDGKFEGDLVST-GDLIVGPRGELVGDVRDMADLVVFGKVIGNINVDHLELCGAASIYGDVTCKTLLMDPTVVLVG---TLNVNP 222
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12142.1669.1 vs. uniprot
Match: A0A6H5JN16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN16_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 7.980e-18
Identity = 42/100 (42.00%), Postives = 70/100 (70.00%), Query Frame = 1 
Query:   49 QKPESMVAETLRMKGELEFTRLLRVDGRFEGELITDKGSLVVGPKGEVVGDLKNMQEVYVEGIVRGNVFANDVKIKNTGMLLGDVQCMCLTLDPTASIKG 348
            + PE+ V E + +KGEL F RLLRVDG F+G+L++  G LV+G  G V G++++++EV  +G V GN+ A  V+++ + +++G++ C  L++DP  SI G
Sbjct:   69 ETPETTVGENVHVKGELSFDRLLRVDGSFKGQLVST-GDLVIGATGIVRGNIEHLREVVSDGTVVGNIQAERVRLRRSAIVIGNITCYSLSMDPDVSISG 167
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12142.1669.1 vs. uniprot
Match: A0A835YKE5_9STRA (Polymer-forming cytoskeletal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE5_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 9.270e-17
Identity = 41/100 (41.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:   49 QKPESMVAETLRMKGELEFTRLLRVDGRFEGELITDKGSLVVGPKGEVVGDLKNMQEVYVEGIVRGNVFANDVKIKNTGMLLGDVQCMCLTLDPTASIKG 348
            + PE+ + E + + GEL F RLLR+DGRF G L++ +G LVVGP G + GD+ +M EV V+G V G++    V ++    + G++ C  L +DPT  + G
Sbjct:   29 ETPETTIGERVSVSGELSFDRLLRIDGRFSGRLLS-QGDLVVGPTGVLTGDVVDMGEVIVDGKVVGDISVQKVSLRGRAEVHGNITCKSLCVDPTVIVVG 127
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12142.1669.1 vs. uniprot
Match: A0A5D6Y579_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y579_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.640e-15
Identity = 44/111 (39.64%), Postives = 71/111 (63.96%), Query Frame = 1 
Query:   52 KPESMVAETLRMKGELEFTRLLRVDGRFEGELITDKGSLVVGPKGEVVGDLKNMQEVYVEG-IVRGNVFANDVKIKNTGMLLGDVQCMCLTLDPTASIKGVTDTLTVNPSA 381
            +PE+ +   ++MKGEL F RLLR++G FEG+L++ KGSLVVG KG + G ++NM+EV+V G  + GN+    + +++   + G++    + +DP   + G    L VNP A
Sbjct:   86 EPETTIGVAVKMKGELSFERLLRIEGEFEGKLVS-KGSLVVGAKGVLTGPVENMKEVHVTGGKIVGNITVEKLVLRDKAQVFGNITAKTVKIDPDCVVVG---RLNVNPQA 192
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12142.1669.1 vs. uniprot
Match: A0A835Z9U6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9U6_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.710e-15
Identity = 47/107 (43.93%), Postives = 70/107 (65.42%), Query Frame = 1 
Query:   37 PLSI--QKPESMVAETLRMKGELEFTRLLRVDGRFEGELITDKGSLVVGPKGEVVGDLKNMQEVYVEG-IVRGNVFANDVKIKNTGMLLGDVQCMCLTLDPTASIKG 348
            PLS+   KP+S++ ++L +KGELE+ +LLRVDG F+G LIT KGSL+VGP G  +G +  ++EV V+G  V G+   + + ++      G+V C  L LD T  +KG
Sbjct:   40 PLSLVDDKPDSVICQSLHIKGELEYQKLLRVDGTFQGTLIT-KGSLIVGPAGRFIGSVAGLREVMVDGGQVDGDFDCDKLTLRCGARFAGNVVCNALVLDGTCKLKG 145
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12142.1669.1 vs. uniprot
Match: A0A212KW08_9CHLA (Uncharacterized protein n=1 Tax=Chlamydiales bacterium SCGC AG-110-P3 TaxID=1871323 RepID=A0A212KW08_9CHLA)

HSP 1 Score: 79.7 bits (195), Expect = 1.360e-14
Identity = 44/110 (40.00%), Postives = 72/110 (65.45%), Query Frame = 1 
Query:   22 PLYSPPLSIQKPESMVAETLRMKGELEFTRLLRVDGRFEGELITDKGSLVVGPKGEVVGDLKNMQEVYVEGIVRGNVFAND-VKIKNTGMLLGDVQCMCLTLDPTASIKG 348
            PL S  LS ++P++ + E +  KGEL F RLLR+DG+FEG+L++D G L+VGP G V  +++ M E  +EG V GN+   + ++++    ++GD++   L++D   SI G
Sbjct:  110 PLLSSTLSAEEPDTTLGEGVVFKGELTFKRLLRIDGQFEGDLVSD-GKLIVGPTGIVKSNVR-MHEAIIEGRVEGNITVQERLELRCNAQVIGDIKAKQLSVDEGVSIVG 217
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12142.1669.1 vs. uniprot
Match: A0A6G0WCC1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCC1_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.410e-14
Identity = 46/109 (42.20%), Postives = 70/109 (64.22%), Query Frame = 1 
Query:   58 ESMVAETLRMKGELEFTRLLRVDGRFEGELITDKGSLVVGPKGEVVGDLKNMQEVYVEG-IVRGNVFANDVKIKNTGMLLGDVQCMCLTLDPTASIKGVTDTLTVNPSA 381
            E+ +   ++MKGEL F RLLR++G FEG+LI+ KGSLVVG KG + G++  M+EV V G  V GN+  + + +++ G + G+V    + +DP   + G   TL +NP A
Sbjct:   78 ETTIGVAVKMKGELSFERLLRIEGEFEGKLIS-KGSLVVGHKGLLNGNIDGMKEVLVAGGRVLGNIQVDRLVLRDKGQIFGNVTAKSVRIDPDCILVG---TLNINPHA 182
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12142.1669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0L1_ECTSI5.060e-5994.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7F7_9PHAE5.180e-3076.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0Y5F7_AURAN1.160e-2044.80Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3ZTD0_9STRA1.170e-1944.44Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6H5JN16_9PHAE7.980e-1842.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YKE5_9STRA9.270e-1741.00Polymer-forming cytoskeletal-domain-containing pro... [more]
A0A5D6Y579_9STRA2.640e-1539.64Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A835Z9U6_9STRA2.710e-1543.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A212KW08_9CHLA1.360e-1440.00Uncharacterized protein n=1 Tax=Chlamydiales bacte... [more]
A0A6G0WCC1_9STRA1.410e-1442.20Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12142contigE-fasciculatus_F_contig12142:19..2868 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score102.1
Seed ortholog evalue3.4e-19
Seed eggNOG ortholog44056.XP_009035549.1
EggNOG free text desc.Polymer-forming cytoskeletal
EggNOG OGs2RXV0@2759,COG1664@1
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein of unknown function DUF583
Ec32 orthologEc-06_007160.1
Exons3
Model size639
Cds size639
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12142.1669.1prot_E-fasciculatus_F_contig12142.1669.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12142 19..2868 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927724.4254696-CDS-E-fasciculatus_F_contig12142:18..2341622927724.4254696-CDS-E-fasciculatus_F_contig12142:18..234Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12142 19..234 +
1695995666.6422982-CDS-E-fasciculatus_F_contig12142:18..2341695995666.6422982-CDS-E-fasciculatus_F_contig12142:18..234Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12142 19..234 +
1622927724.4415565-CDS-E-fasciculatus_F_contig12142:1778..19071622927724.4415565-CDS-E-fasciculatus_F_contig12142:1778..1907Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12142 1779..1907 +
1695995666.6590893-CDS-E-fasciculatus_F_contig12142:1778..19071695995666.6590893-CDS-E-fasciculatus_F_contig12142:1778..1907Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12142 1779..1907 +
1622927724.4639664-CDS-E-fasciculatus_F_contig12142:2574..28681622927724.4639664-CDS-E-fasciculatus_F_contig12142:2574..2868Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12142 2575..2868 +
1695995666.668816-CDS-E-fasciculatus_F_contig12142:2574..28681695995666.668816-CDS-E-fasciculatus_F_contig12142:2574..2868Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12142 2575..2868 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12142.1669.1

>prot_E-fasciculatus_F_contig12142.1669.1 ID=prot_E-fasciculatus_F_contig12142.1669.1|Name=mRNA_E-fasciculatus_F_contig12142.1669.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=213bp
PSLPPPPPLYSPPLSIQKPESMVAETLRMKGELEFTRLLRVDGRFEGELI
TDKGSLVVGPKGEVVGDLKNMQEVYVEGIVRGNVFANDVKIKNTGMLLGD
VQCMCLTLDPTASIKGVTDTLTVNPSATARAAKYFPSATTAAGPSARKSN
PSTPPPSYSSSVSSAATATRAQVDDSSKPLNPVPSPPVTLKLPPVPAAAA
AAAAGHHQGVTDT
back to top

mRNA from alignment at E-fasciculatus_F_contig12142:19..2868+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12142.1669.1 ID=mRNA_E-fasciculatus_F_contig12142.1669.1|Name=mRNA_E-fasciculatus_F_contig12142.1669.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2850bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12142:19..2868+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCCTCTCTCCCCCCCCCCCCCCCCCTTTACTCTCCTCCATTATCCATCCA
GAAACCAGAGTCGATGGTGGCCGAGACTCTCCGAATGAAGGGCGAGCTCG
AGTTCACCCGGCTCCTTCGCGTGGACGGTCGGTTTGAGGGAGAGCTCATC
ACCGACAAGGGGAGCCTGGTTGTTGGGCCCAAGGGGGAGGTCGTGGGGGA
CCTCAAGAACATGCAGGTGGGTTGGTTTGGTGGTGGCATCATCATGCTTG
CTTGACTACTTGTAGCTGCTGGGATGGATGGTGGAGATATATGTAGACTT
GACATTCACATTATGTAGTATACGTGTGATGCAGAAGCGCTCCGCACGTT
GGAACTTTAGTTTTGGCGAGTCTGGGGGGGGTTCTTGCGGTCAAGCTACC
AAAGAGTCCGCTCAAGACTATATAGCTTTTAGAAGGGGTACTATTTAGCC
GAGCTATGCATACTACTAGTACATTTTTTCAGTTTTTCATTGGTGCTTGG
CTTTTCTTTCAGGCTCAACTTTTCTGAAGTGCCAAGTTCTTCAGTGCGGG
CGCTGCCTTTATTTTGGTGTTCGTGCAGAGAAACGCCCTTTTTTTTTTTT
CATCGCCTGGTATCTACATTTGTGGAGCAGCAGCACCAACTGCTAATGCC
GATTCTCCCATATATTTTGTAAAAGCGTGACAAATTAGATCGCCCACGAG
AGGCGCCATTGATGCTACTGCTGTTGCTGTTGTTGGCCATGCAGACGCGC
GAAGGAGTCAACTCACACATTATGTTCTTGTTTTATCTTGGGAGGGGGGG
CATCGACTTGTACACGGCGATTACGGCTCAGACAATTTACTCATTCGATT
CACACGGCGACACAAACTCCCTGTGCCGCTCGCTCTTCGGTCGGCGCATC
CAGTAGATTCCAGAACTTGGCTTGGCCATAATAATAGTTCAGAGGGGACC
AAACCAAAGGGAGCGATCGCGTCTACCGACCTGCAAAATACCTCTAGAGC
GTGAAAGTACGACTGACTGACAACGACGTTCCCCCCACGGAGCACGTGCA
CGTTTATGGTTATCGGCGGTCAATTCGTCCATATTTCAGTGTGAGCACAC
CCGCCCAGACACGCGGTGGCTGGCGCCACACGCTCTTCCATTCAACAAAT
ATTTCGATTTTGACAAGGATAAGGCATGGTACACAGACTGCCGACTAGTC
CAGAGTGTTGCGAATATATGGCAGTAGATCCTGAGAGACACGGCCTAAGA
AGATGAACATGCAGCAAGACAAAGAGAGGACATGGACGATGGTTGGGATC
ATGGCGGAGGTTTGTGTGTTCATTATGAACGACCCCGACATCTGGTGTGT
TTGTCGCGCAGTGCCGTACGACATTCAGTCGCTCTCGTTGCTGACGGTTA
CTTTTTTATCAGTTGCTTCGCTTCGGATGGCGCCGCCACGTGGCTTGAGG
AAATGGTGTCAAGAGTTGATGCGTTCCTGCCTTCACCCACTGATCGTTCT
GTTCCATCCACTCAGACTATGATTCTTGATGTTTTTTGTCGTGTTTTTTC
AGTACAATAGTTGTCGTGGCTCGGCGAAACGACCACGTCAGGGAGTAGTG
TACACGCCGGAGGTGCACCACATGCGATGCGTCTGTAGACGCACAAGACA
AGCAGCATTTCTCCCGGCACAACCAAAAAACAACAACCGTCATTCGTTAG
TTTTTCGTTATTTTTATGGATTTTGTTGTTCCTTGGTTTTGGCTGACGCC
TCCGGAACAGGAAGTGTACGTGGAGGGCATCGTCCGCGGCAACGTCTTCG
CGAACGACGTGAAGATCAAGAACACCGGGATGCTCCTGGGCGACGTCCAG
TGCATGTGCCTCACCCTCGACCCCACGGCGTCCATCAAGGTGCGCCACGC
AACAACCGAAACAGCAACAACAACGGGCGAAAAAACAACCTCCACTATTA
ATAGTGCCCTCCCCCTCCCCTACGCTTTTGAGTTCCACGTTTCTCTCGGC
TCATACCCTTGTAATAGCAAACGTTTTTCTCCCGCTCACTGCAAAGACTT
GCAAACACACCTTTCGACTCCTCCGTGATCTTTATCGAACGGGTACTAAA
ATAGTCTCCATTTATTGGTAATTTTCTTGACAGAGTGTTTTCTTGTGTGG
CGTAAGTAGAGTGAGAATGGGACTTTGATGGGGGATAGATACTCTGTAGG
CCTTGTTGAAGGGTGGCGACCGCCCCCGCAGTAGAGGAAGACTTTTCCTA
GGCTATAGATGATACCCGAAACAGCTAGTATAAAATAACTCACAAGGTAG
GTGGCGAAATTGAGCACTCGGAGCACGGCCAGTAAACGAACCGAGCCGTT
TTTTCCCGGGCAATCAAAACACGTTCCGCAGCCTATGTACGAACCTGAGG
CATCGTAGCGTTTGCTACGGTATAGGTGGACACAGGTACAGTAGAGAGGT
GCTGCTACCGTCGGCTCCGCTTTACCTGGCTCTTTCCCCCTCTTTTTCGT
TCCGTTTTTTTTTTTTCTTGTGGTGGTGGTGCCAAACATTTTATTTTATT
TTTCAGGGAGTGACGGACACATTAACTGTGAACCCTTCGGCCACCGCCAG
GGCTGCCAAGTATTTCCCTTCCGCCACCACCGCCGCCGGCCCATCCGCGC
GGAAAAGCAACCCATCAACCCCTCCCCCGTCCTACTCCTCTTCGGTCTCC
TCCGCCGCCACCGCTACCCGGGCGCAAGTTGACGACAGCAGCAAGCCCTT
GAACCCCGTCCCTTCCCCCCCGGTTACCCTCAAACTACCCCCCGTTCCCG
CCGCCGCCGCCGCCGCCGCCGCCGGCCACCACCAGGGAGTCACCGACACG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12142:19..2868+

>mRNA_E-fasciculatus_F_contig12142.1669.1 ID=mRNA_E-fasciculatus_F_contig12142.1669.1|Name=mRNA_E-fasciculatus_F_contig12142.1669.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1278bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12142:19..2868+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCCTCTCTCCCCCCCCCCCCCCCCCTTTACTCTCCTCCATTATCCATCCA
GAAACCAGAGTCGATGGTGGCCGAGACTCTCCGAATGAAGGGCGAGCTCG
AGTTCACCCGGCTCCTTCGCGTGGACGGTCGGTTTGAGGGAGAGCTCATC
ACCGACAAGGGGAGCCTGGTTGTTGGGCCCAAGGGGGAGGTCGTGGGGGA
CCTCAAGAACATGCAGCCCTCTCTCCCCCCCCCCCCCCCCCTTTACTCTC
CTCCATTATCCATCCAGAAACCAGAGTCGATGGTGGCCGAGACTCTCCGA
ATGAAGGGCGAGCTCGAGTTCACCCGGCTCCTTCGCGTGGACGGTCGGTT
TGAGGGAGAGCTCATCACCGACAAGGGGAGCCTGGTTGTTGGGCCCAAGG
GGGAGGTCGTGGGGGACCTCAAGAACATGCAGGAAGTGTACGTGGAGGGC
ATCGTCCGCGGCAACGTCTTCGCGAACGACGTGAAGATCAAGAACACCGG
GATGCTCCTGGGCGACGTCCAGTGCATGTGCCTCACCCTCGACCCCACGG
CGTCCATCAAGGAAGTGTACGTGGAGGGCATCGTCCGCGGCAACGTCTTC
GCGAACGACGTGAAGATCAAGAACACCGGGATGCTCCTGGGCGACGTCCA
GTGCATGTGCCTCACCCTCGACCCCACGGCGTCCATCAAGGGAGTGACGG
ACACATTAACTGTGAACCCTTCGGCCACCGCCAGGGCTGCCAAGTATTTC
CCTTCCGCCACCACCGCCGCCGGCCCATCCGCGCGGAAAAGCAACCCATC
AACCCCTCCCCCGTCCTACTCCTCTTCGGTCTCCTCCGCCGCCACCGCTA
CCCGGGCGCAAGTTGACGACAGCAGCAAGCCCTTGAACCCCGTCCCTTCC
CCCCCGGTTACCCTCAAACTACCCCCCGTTCCCGCCGCCGCCGCCGCCGC
CGCCGCCGGCCACCACCAGGGAGTCACCGACACGGGAGTGACGGACACAT
TAACTGTGAACCCTTCGGCCACCGCCAGGGCTGCCAAGTATTTCCCTTCC
GCCACCACCGCCGCCGGCCCATCCGCGCGGAAAAGCAACCCATCAACCCC
TCCCCCGTCCTACTCCTCTTCGGTCTCCTCCGCCGCCACCGCTACCCGGG
CGCAAGTTGACGACAGCAGCAAGCCCTTGAACCCCGTCCCTTCCCCCCCG
GTTACCCTCAAACTACCCCCCGTTCCCGCCGCCGCCGCCGCCGCCGCCGC
CGGCCACCACCAGGGAGTCACCGACACG
back to top