mRNA_E-fasciculatus_F_contig12136.1666.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12136.1666.1
Unique NamemRNA_E-fasciculatus_F_contig12136.1666.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12136.1666.1 vs. uniprot
Match: D7FME4_ECTSI (5\'-3\' exoribonuclease 1 (Exonuclease 2) (Exonuclease II) (Exo II) (P140) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME4_ECTSI)

HSP 1 Score: 434 bits (1115), Expect = 5.390e-147
Identity = 214/225 (95.11%), Postives = 219/225 (97.33%), Query Frame = 1
Query:    1 MNGKRNPWEAVNVLPFIDAYRLRAAVKEMCPPTALSPQEAERNTRGQVVEYYHDPFMGRKEMSCNPEIGLADIPQCTASSRVVPFSIEPGECFRPELPHDAIIPSAGFPSLHVLTVGSVEERKVPVNCFGTPSRYETLVLELKRPPVLPPASALSGKVLGRSAYLNWPLMHEAQVVGISDEKEEYRLEEVKGGGGKKSKSKTRVKVSTFTDEAAGRWRIKAAEEQ 675
            MNGKRNPWEAVNVLPFIDAYRLRAAVKE+CPPTALSPQEAERNTRGQVVEY+HD F+ RKEMSCNPEIGLADIPQCTASSR+VPFSIEPGECFRPELPHDAIIPSAGFPSLHVLTVGSVEERKVPVNCFGT SRYETLVLELKRPPVLPPASALSGKVLGRSAYLNWPLMHEAQVVGISDEKEEYRLEEVKGGGGKK K  TRVKVSTFTDEAAGRWR+KAAEEQ
Sbjct:    1 MNGKRNPWEAVNVLPFIDAYRLRAAVKELCPPTALSPQEAERNTRGQVVEYFHDAFVSRKEMSCNPEIGLADIPQCTASSRIVPFSIEPGECFRPELPHDAIIPSAGFPSLHVLTVGSVEERKVPVNCFGTASRYETLVLELKRPPVLPPASALSGKVLGRSAYLNWPLMHEAQVVGISDEKEEYRLEEVKGGGGKKRK--TRVKVSTFTDEAAGRWRLKAAEEQ 223          
BLAST of mRNA_E-fasciculatus_F_contig12136.1666.1 vs. uniprot
Match: A0A835Z4G8_9STRA (XRN 5'-3' exonuclease N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4G8_9STRA)

HSP 1 Score: 190 bits (482), Expect = 8.920e-52
Identity = 93/174 (53.45%), Postives = 121/174 (69.54%), Query Frame = 1
Query:    1 MNGKRNPWEAVNVLPFIDAYRLRAAVKEMCPPTALSPQEAERNTRGQVVEYYHDPFMGRKEMSCNPEIGLADIPQCTASSRVVPFSIEPGECFRPELPHDAIIPSAGFPSLHVLTVGSVEERKVPVNCFGTPSRYETLVLELKRPPVLPPASALSGKVLGRSAYLNWPLMHEAQ 522
            MNGKRNPWEAVN+LPFIDA RL AAV E CP   L+P+E +RNT G V+EY +        +SCNPEIGL+DI QC +  + +P+SIE    F   LP  + IP AGFPSL+VL +   E + + +N FG+ SRY T+VL L+RP  LP A  L+ +V+GRS ++NWPL+HEA+
Sbjct:  547 MNGKRNPWEAVNLLPFIDASRLFAAVHERCPVQLLTPEERKRNTYGAVLEYTYSEHATGTVVSCNPEIGLSDIRQCVSEEKELPWSIESHTSFTSALPLGSTIPLAGFPSLNVLPIEQAEAKPIKLNVFGSESRYSTMVLTLRRPRGLPSAEQLAPRVIGRSVFVNWPLLHEAK 720          
BLAST of mRNA_E-fasciculatus_F_contig12136.1666.1 vs. uniprot
Match: A0A7S2PS12_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PS12_9STRA)

HSP 1 Score: 177 bits (450), Expect = 1.930e-47
Identity = 91/218 (41.74%), Postives = 130/218 (59.63%), Query Frame = 1
Query:    1 MNGKRNPWEAVNVLPFIDAYRLRAAVKEMCPPTALSPQEAERNTRGQVVEYYHDPFMGRKEMSCNPEIGLADIPQCTASSRVVPFSIEPGECFRPELPHDAIIPSAGFPSLHVLTVGSVEERKVPVNCFGTPSRYETLVLELKRPPVLPPASALSGKVLGRSAYLNWPLMHEAQVVGISDEKEEYRLEEVKGGGGKKSKSKTRVKVSTFTDEAAGRWR 654
            MNGK+NPWE VN+LPFID   L+  +K +CP ++L+ +E  RN RGQV  Y +D        SCN EIGL DI  C +  +++        CF+PE+     IP  GFPSL+VL + + E   + VNCFG+ S+Y T+VL L++ P LP  +AL+ +VLG+  ++NWP+MHEA+VV ISD   E R+                 K  ++TD+ + RW+
Sbjct:  307 MNGKKNPWEGVNLLPFIDVALLKETIKNLCPDSSLTAEEFRRNKRGQVFLYSYDLTCSETVPSCNREIGLPDIHSCHSHVKMLDAVDRTDLCFKPEVIPGTKIPYPGFPSLNVLPICNTELTAIGVNCFGSSSKYSTMVLHLQKLPQLPAVAALAPRVLGQILFINWPMMHEAKVVAISDSTTEIRVN---------------GKTKSYTDKESERWQ 509          
BLAST of mRNA_E-fasciculatus_F_contig12136.1666.1 vs. uniprot
Match: K0STL9_THAOC (5'-3' exoribonuclease 1 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STL9_THAOC)

HSP 1 Score: 169 bits (428), Expect = 1.760e-44
Identity = 86/187 (45.99%), Postives = 114/187 (60.96%), Query Frame = 1
Query:    1 MNGKRNPWEAVNVLPFIDAYRLRAAVKEMCPPTALSPQEAERNTRGQVVEYYHDPFMGRKEMSCNPEIGLADIPQCTASSRVVPFSIEPGECFRPELPHDAIIPSAGFPSLHVLTVGSVEERKVPVNCFGTPSRYETLVLELKRPPVLPPASALSGKVLGRSAYLNWPLMHEAQVVGISDEKEEYRL 561
            MNGKRNPWE VN+LPFIDA RL+ A+K+ CP   L+ +E  RN  GQV  Y +D        SCN +IGL +I +C +    +  S E    F PEL     IP  GFPSL+VL +  VE R   +NCFG  S+Y   +L +   P LP A  L+  ++G+S Y+NWP+MHEA+VV ++D K E R+
Sbjct:  619 MNGKRNPWEGVNILPFIDANRLKDAIKDNCPDRLLTAEERNRNRVGQVFCYSYDEACNDTIPSCNRDIGLPNIEKCHSRVITIDNSSESTVSFSPELIPGTKIPYPGFPSLNVLPIERVELRNAGLNCFGFASKYPNTILTMHTLPQLPSAEQLAANLIGKSIYVNWPMMHEAKVVAVTDSKSEVRM 805          
BLAST of mRNA_E-fasciculatus_F_contig12136.1666.1 vs. uniprot
Match: A0A7S1UYY6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UYY6_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.130e-44
Identity = 86/192 (44.79%), Postives = 114/192 (59.38%), Query Frame = 1
Query:    1 MNGKRNPWEAVNVLPFIDAYRLRAAVKEMCPPTALSPQEAERNTRGQVVEYYHDPFMGRKEMSCNPEIGLADIPQCTASSRVVPFSIEPGECFRPELPHDAIIPSAGFPSLHVLTVGSVEERKVPVNCFGTPSRYETLVLELKRPPVLPPASALSGKVLGRSAYLNWPLMHEAQVVGISDEKEEYRLEEVKG 576
            MNGKRNPWE VN+LPFID   L+  +    P + L+  E +RN+RG V  Y HDP       S N  IGL DI +C +    +        CF+PEL     +P  GFPS++VL + S E  K  +NCFG+ S+Y  ++L L + P +PP   L+G +LG S Y+NWP+MHEA+VV +SD   E RL  VKG
Sbjct:   10 MNGKRNPWEGVNLLPFIDVKLLKQTIATQVPNSTLTNDERKRNSRGVVFMYEHDPTANETIPSPNTSIGLIDIQRCHSKIEEIDEPDRLDICFKPELVPGTKLPYPGFPSMNVLPIASFELTKTGLNCFGSASKYPNMILTLHQLPQMPPVEQLAGNILGHSLYINWPMMHEARVVAVSDAVSEARL--VKG 199          
BLAST of mRNA_E-fasciculatus_F_contig12136.1666.1 vs. uniprot
Match: A0A1Z5JKV0_FISSO (5'-3' exoribonuclease 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKV0_FISSO)

HSP 1 Score: 168 bits (426), Expect = 3.250e-44
Identity = 92/224 (41.07%), Postives = 126/224 (56.25%), Query Frame = 1
Query:    1 MNGKRNPWEAVNVLPFIDAYRLRAAVKEMCPPTALSPQEAERNTRGQVVEYYHDPFMGRKEMSCNPEIGLADIPQCTASSRVVPFSIEPGEC-FRPELPHDAIIPSAGFPSLHVLTVGSVEERKVPVNCFGTPSRYETLVLELKRPPVLPPASALSGKVLGRSAYLNWPLMHEAQVVGISDEKEEYRLEEVKGGGGKKSKSKTRVKVSTFTDEAAGRWRIKAAE 669
            MNGK+NPWE VN+LPFID   L++ V++ CP + LS  E  RN+ G +  Y HDP       S NP IGL DI  C ++  V+ F   P    F P+L     +P  GFPSL+VL + S+   K  +NCFG PS+Y   +L L   P L P   L+  +LG+S ++NWP+MHEA+V+G+S E  E ++       GK+       KVS F    A +WR  + E
Sbjct:  551 MNGKKNPWEGVNLLPFIDIALLKSTVEKFCPDSKLSTAELVRNSMGTIYCYKHDPTSIETVTSPNPSIGLPDISVCHSTISVIEFDEGPSTSKFEPKLVSGTQLPYPGFPSLNVLPIASIALTKAGLNCFGVPSKYLNTILHLTELPELAPIEQLAESLLGKSVFVNWPMMHEAKVIGLSSESREIKIL-----NGKR-------KVSEFGKVEADKWRTDSME 762          
BLAST of mRNA_E-fasciculatus_F_contig12136.1666.1 vs. uniprot
Match: A0A6H5KVU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU6_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 2.630e-41
Identity = 83/92 (90.22%), Postives = 86/92 (93.48%), Query Frame = 1
Query:  400 RYETLVLELKRPPVLPPASALSGKVLGRSAYLNWPLMHEAQVVGISDEKEEYRLEEVKGGGGKKSKSKTRVKVSTFTDEAAGRWRIKAAEEQ 675
            RY TLVL LKRPPVLPPASAL+GKVLGRSAYLNWPLMHEAQVVGISDEKEEY LEEVKGGGGKK K  TRVKV+TFTDEAAGRWR+KAAEEQ
Sbjct:    2 RYATLVLALKRPPVLPPASALAGKVLGRSAYLNWPLMHEAQVVGISDEKEEYLLEEVKGGGGKKLK--TRVKVNTFTDEAAGRWRLKAAEEQ 91          
BLAST of mRNA_E-fasciculatus_F_contig12136.1666.1 vs. uniprot
Match: A0A7S2PSP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSP2_9STRA)

HSP 1 Score: 160 bits (404), Expect = 2.670e-41
Identity = 86/203 (42.36%), Postives = 118/203 (58.13%), Query Frame = 1
Query:    1 MNGKRNPWEAVNVLPFIDAYRLRAAVKEMCPPTALSPQEAERNTRGQVVEYYHDPFMGRKEMSCNPEIGLADIPQCTASSRVVPFSIEPGECFRPELPHDAIIPSAGFPSLHVLTVGSVEERKVPVNCFGTPSRYETLVLELKRPPVLPPASALSGKVLGRSAYLNWPLMHEAQVVGISDEKEEYRLEEVKGGGGKKSKSKTR 609
            MNGKRNPWE VN+LPFID   L+  + + CP +AL+  E  RN  G+V  Y +D  +     SCN +IGL +I +C +   ++         F+PEL     IP  GFPSL+VL +  VE R   VNCFG PS+Y  ++L +   P +P A  L+  ++GR+ ++NWP+MHEA+VV +SD   E R          K KSKTR
Sbjct:  567 MNGKRNPWEGVNILPFIDGNLLKQTIAKHCPDSALTADERHRNRVGKVYCYTYDAAVNDTVPSCNRDIGLPNIVKCNSRVDIIENLSVSNISFKPELVPGTKIPYPGFPSLNVLPIEHVELRNAGVNCFGFPSKYPNMILTMHTLPQMPGAVQLAENLIGRNIFVNWPMMHEAKVVAVSDSTCEVRKP--------KGKSKTR 761          
BLAST of mRNA_E-fasciculatus_F_contig12136.1666.1 vs. uniprot
Match: A0A7S4RC29_9STRA (5'-3' exoribonuclease 1 n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RC29_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.840e-40
Identity = 89/221 (40.27%), Postives = 121/221 (54.75%), Query Frame = 1
Query:    1 MNGKRNPWEAVNVLPFIDAYRLRAAVKEMCPPTALSPQEAERNTRGQVVEYYHDPFMGRKEMSCNPEIGLADIPQCTASSRVVPFSIEPGECFRPELPHDAIIPSAGFPSLHVLTVGSVEERKVPVNCFGTPSRYETLVLELKRPPVLPPASALSGKVLGRSAYLNWPLMHEAQVVGISDEKEEYRLEEVKGGGGKKSKSKTRVKVSTFTDEAAGRWRIKA 663
            MNGKRNPWE VN+LPFID + L++++ + CP   L+  E  RN  G+V  Y  DP       S N +IGL DI +C +   +   +      FRP L     IP  GFPSL+VL + S+E   V +N FG PS+Y T +L LK    LP A+ L+   LG+S ++NWP+MHE++VV +SD   E R            K K + KV  FT     RW  ++
Sbjct:  571 MNGKRNPWEGVNILPFIDVHLLKSSISKYCPDEVLTADERNRNRLGKVYLYTFDPASNDMVPSFNKDIGLPDIQKCNSRVDIFEENDSTDISFRPTLVPGTQIPYPGFPSLNVLPLVSIELIPVGLNIFGMPSKYATTMLTLKPMGTLPAANDLADHFLGKSLFINWPMMHESRVVAVSDAVCEVR------------KVKKKKKVRWFTPPETERWETES 779          
BLAST of mRNA_E-fasciculatus_F_contig12136.1666.1 vs. uniprot
Match: A0A6V1PVC7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PVC7_HETAK)

HSP 1 Score: 157 bits (397), Expect = 2.470e-40
Identity = 86/192 (44.79%), Postives = 113/192 (58.85%), Query Frame = 1
Query:    4 NGKRNPWEAVNVLPFIDAYRLRAAVKEMCPPTALSPQEAERNTRGQVVEYYHDPFMGRKEMSCNPEIGLADIPQCTASSRVVPFSIEPGECFRPELPHDAI-----IPSAGFPSLHVLTVGSVEERKVPVNCFGTPSRYETLVLELKRPPVLPPASALSGKVLGRSAYLNWPLMHEAQVVGISDEKEEYRLE 564
            NGKRNPWEAVN+LPFIDA R+RAAV   CP   L+ +E  RN  G V+ Y+HDP       SCNPEIGL D+ +C +S  +V       E       H A+     +P  G+PSL  L    V    + +NCFG+ SRY+TLVL+L  P  +P A   + ++LGR+ ++NWP +HEA VVG  D+    R E
Sbjct:  425 NGKRNPWEAVNLLPFIDADRMRAAVAAHCPDRLLTEEERRRNRIGPVLLYHHDPANTATIPSCNPEIGLPDLLRCASS--IVELPTNAFEDVAEGTLHSALRPGVTLPLPGYPSLATLPRRGVRAEAIGLNCFGSGSRYQTLVLDLDPPAQVPTAEEAARELLGRTVFVNWPNLHEALVVGAQDQHTAARRE 614          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12136.1666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FME4_ECTSI5.390e-14795.115\'-3\' exoribonuclease 1 (Exonuclease 2) (Exonucl... [more]
A0A835Z4G8_9STRA8.920e-5253.45XRN 5'-3' exonuclease N-terminus-domain-containing... [more]
A0A7S2PS12_9STRA1.930e-4741.74Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
K0STL9_THAOC1.760e-4445.995'-3' exoribonuclease 1 n=1 Tax=Thalassiosira ocea... [more]
A0A7S1UYY6_9STRA2.130e-4444.79Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A1Z5JKV0_FISSO3.250e-4441.075'-3' exoribonuclease 1 n=2 Tax=Fistulifera solari... [more]
A0A6H5KVU6_9PHAE2.630e-4190.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2PSP2_9STRA2.670e-4142.36Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S4RC29_9STRA1.840e-4040.275'-3' exoribonuclease 1 n=3 Tax=Ditylum brightwell... [more]
A0A6V1PVC7_HETAK2.470e-4044.79Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12136contigE-fasciculatus_F_contig12136:492..3604 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score433.7
Seed ortholog evalue5.4e-119
Seed eggNOG ortholog2880.D7FME4
KEGG koko:K12618
KEGG Pathwayko03008,ko03018,map03008,map03018
EggNOG free text desc.5'-3' exoribonuclease activity
EggNOG OGsCOG5049@1,KOG2045@2759
Ec32 ortholog description5'-3' exoribonuclease
Ec32 orthologEc-05_001060.1
COG Functional cat.ADL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03016,ko03019,ko03036
Hectar predicted targeting categoryother localisation
Exons5
Model size705
Cds size705
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12136.1666.1prot_E-fasciculatus_F_contig12136.1666.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12136 492..3604 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927723.991409-CDS-E-fasciculatus_F_contig12136:491..6471622927723.991409-CDS-E-fasciculatus_F_contig12136:491..647Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12136 492..647 -
1695995666.5078933-CDS-E-fasciculatus_F_contig12136:491..6471695995666.5078933-CDS-E-fasciculatus_F_contig12136:491..647Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12136 492..647 -
1622927724.0077477-CDS-E-fasciculatus_F_contig12136:1218..13661622927724.0077477-CDS-E-fasciculatus_F_contig12136:1218..1366Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12136 1219..1366 -
1695995666.5201573-CDS-E-fasciculatus_F_contig12136:1218..13661695995666.5201573-CDS-E-fasciculatus_F_contig12136:1218..1366Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12136 1219..1366 -
1622927724.0180855-CDS-E-fasciculatus_F_contig12136:1591..17501622927724.0180855-CDS-E-fasciculatus_F_contig12136:1591..1750Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12136 1592..1750 -
1695995666.530927-CDS-E-fasciculatus_F_contig12136:1591..17501695995666.530927-CDS-E-fasciculatus_F_contig12136:1591..1750Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12136 1592..1750 -
1622927724.030021-CDS-E-fasciculatus_F_contig12136:2627..27281622927724.030021-CDS-E-fasciculatus_F_contig12136:2627..2728Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12136 2628..2728 -
1695995666.5412476-CDS-E-fasciculatus_F_contig12136:2627..27281695995666.5412476-CDS-E-fasciculatus_F_contig12136:2627..2728Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12136 2628..2728 -
1622927724.0458894-CDS-E-fasciculatus_F_contig12136:3463..36041622927724.0458894-CDS-E-fasciculatus_F_contig12136:3463..3604Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12136 3464..3604 -
1695995666.5513694-CDS-E-fasciculatus_F_contig12136:3463..36041695995666.5513694-CDS-E-fasciculatus_F_contig12136:3463..3604Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12136 3464..3604 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12136.1666.1

>prot_E-fasciculatus_F_contig12136.1666.1 ID=prot_E-fasciculatus_F_contig12136.1666.1|Name=mRNA_E-fasciculatus_F_contig12136.1666.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=235bp
MNGKRNPWEAVNVLPFIDAYRLRAAVKEMCPPTALSPQEAERNTRGQVVE
YYHDPFMGRKEMSCNPEIGLADIPQCTASSRVVPFSIEPGECFRPELPHD
AIIPSAGFPSLHVLTVGSVEERKVPVNCFGTPSRYETLVLELKRPPVLPP
ASALSGKVLGRSAYLNWPLMHEAQVVGISDEKEEYRLEEVKGGGGKKSKS
KTRVKVSTFTDEAAGRWRIKAAEEQVSFFLFFLL*
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mRNA from alignment at E-fasciculatus_F_contig12136:492..3604-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12136.1666.1 ID=mRNA_E-fasciculatus_F_contig12136.1666.1|Name=mRNA_E-fasciculatus_F_contig12136.1666.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3113bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12136:492..3604- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAACGGGAAGCGCAACCCATGGGAAGCGGTGAACGTGCTCCCTTTCAT CGACGCCTACCGCCTGCGAGCGGCCGTGAAGGAGATGTGTCCCCCTACGG CACTGTCGCCCCAGGAGGCGGAGCGGAACACCAGGGGACAGGTGAGAAGC GTCCCCCCCTCCCCAAAAAAAAATCATGTATAAAAAAAGGAAAACGGGAA GAATAAATGAAGTAAATACATTTTTTGAGCCGCCGTTGGCAAAGTAGGTA GGAGGGAGCGATTGGCCATCGGTGGTCGGTCGTATGGAAACAATGCGAGG ACGTGTGGTCAATGTTATGAATGGTCTAACCGTTAAGGCATGCGAGGCAT GGTCTAACCGTTAAGGCATGCGAAGCATGAGTACAGTACTCCCTCTGGAA GACGCAACTTTCCAGTGTCTGGCGCTCTTTTTAGGGAAGGTTTCGTGTCA TCGTAGCATTACCAACACACAAGGGGTATAAACGGGTGTCTCGCAGCTGC GTCACCCCCGCTGTAGAGACGAAAACGAACATCAGGGCATGGGTGAACCC CCAAACGTTTTTGGCCCAATGTGTAGCTCATCAGCAGCGGTGGGCTGGTC GGTGTGAGCAATGCGCTGTTTTGCTCGAAATTGAAAATTCGTTACATGTG TCGCTGTTAGGTTATTACCCCCAGAGGAAAATGAAACGGGCCGCGGGCAA AAAAAGAAATCCTTAAGAGTGGCGGTTTTCCAGCTGCTCTCTCGGGGCGT CCCATTCGCTGATCCGATCCGTGGAACACCCGCGTGGTTGCGGTTTGCGG CCTACTTTTGGTGTCCTGTTTCGCAGATCCGTTTCGAATCTCGCGTGGTT GTTTCTCGTTTTTTTTTTTTTGTCAGGTTGTTGAGTATTACCATGACCCT TTCATGGGCCGGAAAGAGATGTCCTGCAACCCGGAGATAGGGCTGGCGGA TATTCCCCAGTGCACAGCATCATCGAGGTACGTACTGCTGTAGAATGCAA TGCAGAAGAGTGGGATACCGAATTCCATTCAAGATAACACCCCCCCCCCT GTGTTATGTACCGGTTTTGGCGTTGCAGAGGAGTGGAACACCGCATTTCA CACAAGATAACACGCCCCCCGGGCGATGATAGGTAACATTATTGGCGTTT GATAGTCTAATCATCATCGGTGTGTGAATCTGTGGGTGGGGTCGATCCGA GAGTTCATGTTGAGCCGTACCGTAGGAATATCCATCACCGGGTGTGGTAT TCCATGGACGGGAGGGGTCATGTAAACGCATGACGAAGTCCTTAGGCCGT AGACCGCGGCATCCCTACAATGCCAGGACGGAGCGATATGCTGCCCGGTT TGCGCCGACCCAGGCTACGTTTCACAAAGATGAACCAGAAGCTGTCAGTG TCATCATCATCATCCATCATCCATCATCCTTATCCTTGCGTATGCTGTGC CAGACCAGACATTTCAATGGGTTGAATATTCCGTGGGGGGGGTGTTATCT TGCGTGGTCTTCCGTGGAGCGTTGCGTCTCGTTGCCTGCGGCTTGTTGCG CTTGGTCTGTGGCCCGTTTATTCCGCCGCACGAGTAAAGTGTATTGTACC CTTAACACTGTGTTGTTCTGCCTTGCCTCCTACCGTTTTTTGTTACCCTT GCCTTGTCTTCTACCGTTGCAGCACTACCGCTGCACATACATTTTTTTTG TCTTTTCCATGTTTTTCTGGTGTTTTGGGCGTTTTTGTTGTGTTCCTTGC CCTGTTTGCATCATGTTTCACGATCTTTTTACCCATTGTAGTTCAGTAAT ATTGTCAATCACGATTTTTTTGTCTTTCTTCATTTCTTTGTTTCTCATAC ACAGGGTGGTGCCATTCTCCATCGAGCCAGGGGAGTGCTTCCGGCCGGAG CTTCCACACGACGCCATCATACCATCCGCGGGTTTTCCCAGCCTGCACGT GCTTACCGTCGGTTCCGTGGAAGAGCGGAAGGTTCCCGTAAACTGCTTCG GAACGCCATCCAGGTATGGATTACTCCTTCGTAACAAACCACAGCAGTTA TGAAAACGCCTACAGCGGTAGATCCTCTTTTTCTGTGTTGTTTACCTGCG ACCTTGACCACGTCTGACTCTGAACCGCGAAACAATTCAGTTACACCAAA ATAGTTCGATGCATGCGTAGACGACCGACTGTCGCCACTCGTGTATACAA TTGTACACCATTTTGTTTCCTTTTTTTTTCAACATCAGGTACGAGACGCT TGTCCTAGAGCTTAAGCGGCCCCCGGTGCTGCCTCCGGCGTCAGCGCTGT CGGGCAAGGTTCTGGGGAGGTCTGCGTACCTCAACTGGCCTCTCATGCAC GAGGCTCAGGTGGTCGGCATCAGCGACGAAAAAGAGGTATGCACGGCAGC AGCAGCTGCAGCAGCAGTAGCGGGTTGATATACAGACCGCCATTTGCATA CGTAATATACCACACACCCCCGGACCGATGGTTTGAAGAGCTCGATTTCT CTTTTCAGCAATGGTGCCGAAAATGGCGGGGTTGGAACACGGTAAAAAAC CCGTTGTGTCCCATTTTTGTTCCGTTTCATGTTTTGGGTTGTTGAGTTGA GTTGGTCTGTGACCACGGAAGGCGTCAGTTGGACAAACCGGTACGGGTGT TAGCAGGCAGTGCTGGGCAGAGACCGGTGCGGTTATTATTGTCAAGACAA CAACAAACGGTAACGATCAACAACAGCGCAGGAGCGACTTCGATAGCAGC AAGCAGCAACAACGACGACGACAACAGCAGCAGCAGCAGCAGCAGCAGCA GCAACAACAACAACAAAATACAGCAGAACCGGCAACAGCAACGGCCAACA GCACCAGTCAACCTACTCAGCGGAGCGGAGACCGGAACGTTACCGTAACC GTTTTTCATGTGATGACGACCACGGCGACCAACAACAATCAACCGTTGTG TGTGCAGGAGTACCGCCTGGAGGAAGTCAAGGGCGGGGGCGGCAAGAAGA GCAAGAGCAAGACTAGGGTTAAGGTTAGCACGTTCACCGACGAAGCGGCG GGCCGCTGGCGTATAAAGGCCGCGGAAGAACAAGTGAGTTTTTTTCTTTT TTTTCTCCTGTAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12136:492..3604-

>mRNA_E-fasciculatus_F_contig12136.1666.1 ID=mRNA_E-fasciculatus_F_contig12136.1666.1|Name=mRNA_E-fasciculatus_F_contig12136.1666.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1410bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12136:492..3604- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAACGGGAAGCGCAACCCATGGGAAGCGGTGAACGTGCTCCCTTTCAT
CGACGCCTACCGCCTGCGAGCGGCCGTGAAGGAGATGTGTCCCCCTACGG
CACTGTCGCCCCAGGAGGCGGAGCGGAACACCAGGGGACAGATGAACGGG
AAGCGCAACCCATGGGAAGCGGTGAACGTGCTCCCTTTCATCGACGCCTA
CCGCCTGCGAGCGGCCGTGAAGGAGATGTGTCCCCCTACGGCACTGTCGC
CCCAGGAGGCGGAGCGGAACACCAGGGGACAGGTTGTTGAGTATTACCAT
GACCCTTTCATGGGCCGGAAAGAGATGTCCTGCAACCCGGAGATAGGGCT
GGCGGATATTCCCCAGTGCACAGCATCATCGAGGTTGTTGAGTATTACCA
TGACCCTTTCATGGGCCGGAAAGAGATGTCCTGCAACCCGGAGATAGGGC
TGGCGGATATTCCCCAGTGCACAGCATCATCGAGGGTGGTGCCATTCTCC
ATCGAGCCAGGGGAGTGCTTCCGGCCGGAGCTTCCACACGACGCCATCAT
ACCATCCGCGGGTTTTCCCAGCCTGCACGTGCTTACCGTCGGTTCCGTGG
AAGAGCGGAAGGTTCCCGTAAACTGCTTCGGAACGCCATCCAGGGTGGTG
CCATTCTCCATCGAGCCAGGGGAGTGCTTCCGGCCGGAGCTTCCACACGA
CGCCATCATACCATCCGCGGGTTTTCCCAGCCTGCACGTGCTTACCGTCG
GTTCCGTGGAAGAGCGGAAGGTTCCCGTAAACTGCTTCGGAACGCCATCC
AGGTACGAGACGCTTGTCCTAGAGCTTAAGCGGCCCCCGGTGCTGCCTCC
GGCGTCAGCGCTGTCGGGCAAGGTTCTGGGGAGGTCTGCGTACCTCAACT
GGCCTCTCATGCACGAGGCTCAGGTGGTCGGCATCAGCGACGAAAAAGAG
GTACGAGACGCTTGTCCTAGAGCTTAAGCGGCCCCCGGTGCTGCCTCCGG
CGTCAGCGCTGTCGGGCAAGGTTCTGGGGAGGTCTGCGTACCTCAACTGG
CCTCTCATGCACGAGGCTCAGGTGGTCGGCATCAGCGACGAAAAAGAGGA
GTACCGCCTGGAGGAAGTCAAGGGCGGGGGCGGCAAGAAGAGCAAGAGCA
AGACTAGGGTTAAGGTTAGCACGTTCACCGACGAAGCGGCGGGCCGCTGG
CGTATAAAGGCCGCGGAAGAACAAGTGAGTTTTTTTCTTTTTTTTCTCCT
GTAAGAGTACCGCCTGGAGGAAGTCAAGGGCGGGGGCGGCAAGAAGAGCA
AGAGCAAGACTAGGGTTAAGGTTAGCACGTTCACCGACGAAGCGGCGGGC
CGCTGGCGTATAAAGGCCGCGGAAGAACAAGTGAGTTTTTTTCTTTTTTT
TCTCCTGTAA
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