mRNA_E-fasciculatus_F_contig12132.1664.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12132.1664.1 vs. uniprot
Match: D7FLW1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLW1_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 4.790e-19 Identity = 60/120 (50.00%), Postives = 79/120 (65.83%), Query Frame = 1
Query: 1 KRKLGAISKTVRRYSVRSASGREPTHTESPEAATSKRQRKASAPRTKEQGEGGGTSAT--TSSRMTG------RGHGQQSRCCQEDGCATRPTYGKRGTKKAEFCYQHAKSGMINLVSKR 336
KR+ G ++K + RYS +AS R+P H ES +SKRQRK SAP TK Q GG +A T+++++ RG GQ S C+E GC+ RP+YGK +KKAEFC QHAK GM+N+V KR
Sbjct: 171 KREFGGMAKALCRYSAWTASSRQPNHAESD---SSKRQRKGSAPGTKAQCGSGGAAAAHKTATKLSTPVIARHRGRGQPS--CEEIGCSMRPSYGKDNSKKAEFCSQHAKQGMVNVVHKR 285
BLAST of mRNA_E-fasciculatus_F_contig12132.1664.1 vs. uniprot
Match: D7FU63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU63_ECTSI) HSP 1 Score: 71.6 bits (174), Expect = 2.250e-13 Identity = 39/69 (56.52%), Postives = 46/69 (66.67%), Query Frame = 3
Query: 177 VIAHDR*RPWPAITVLPGGRLRNKANVRKTRH*EGGVLLSARQVGHDQLGEQEVRPSRVHEAAVIWQRR 383
V A+D P TVLPGGRL N +R+ +GGVLL+A Q HDQ +Q VRPSRVHEA VIW+RR
Sbjct: 59 VNAYDLHTLSPEATVLPGGRLHNVIIIRQWPQQKGGVLLTACQARHDQPRQQAVRPSRVHEAPVIWKRR 127
BLAST of mRNA_E-fasciculatus_F_contig12132.1664.1 vs. uniprot
Match: A0A6H5JGG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG2_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 2.310e-13 Identity = 37/53 (69.81%), Postives = 40/53 (75.47%), Query Frame = 1
Query: 181 SRMTGRGHGQQSR-CCQEDGCATRPTYGKRGTKKAEFCYQHAKSGMINLVSKR 336
SR R HGQ+ R CCQEDGC TRP+YG G KKAEFC QH K GM+NLVSKR
Sbjct: 12 SRTPTRLHGQRQRLCCQEDGCTTRPSYGNAGCKKAEFCSQHKKPGMMNLVSKR 64
BLAST of mRNA_E-fasciculatus_F_contig12132.1664.1 vs. uniprot
Match: D7FIE1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE1_ECTSI) HSP 1 Score: 73.2 bits (178), Expect = 7.170e-13 Identity = 46/83 (55.42%), Postives = 54/83 (65.06%), Query Frame = 1
Query: 103 SKRQRKASAPRTKEQGEGGGTSAT----TSSRMTGRGHGQQSR-CCQEDGCATRPTYGKRGTKKAEFCYQHAKSGMINLVSKR 336
S RQR AS P +EQ GG+ AT TS+ M R HGQQ R CC+E GC P+YG G+KK EFC QHAK GM+NL S+R
Sbjct: 66 SNRQRTASEPGRREQS--GGSEATAAPQTSTPMIARRHGQQWRPCCKEHGCTKWPSYGGAGSKKVEFCAQHAKKGMVNLRSRR 146
BLAST of mRNA_E-fasciculatus_F_contig12132.1664.1 vs. uniprot
Match: D8LFM7_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFM7_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 1.470e-11 Identity = 45/90 (50.00%), Postives = 53/90 (58.89%), Query Frame = 1
Query: 73 THTESPEAATSKRQRKASAPRTKEQGEGGGTSA--TTSSRMTGRGHGQQSRCCQEDGCATRPTYGKRGTKKAEFCYQHAKSGMINLVSKR 336
T T +P A+SKRQRK SAP T G T+A TTS R T R H Q R CQE GC +P+YG+ A+FC QH+K GM L KR
Sbjct: 2 TCTITPARASSKRQRKTSAPETT----GXXTAAIHTTSRRTTARYHDQGQRYCQEHGCTAQPSYGQAHNNNAQFCSQHSKPGMTKLTKKR 87
BLAST of mRNA_E-fasciculatus_F_contig12132.1664.1 vs. uniprot
Match: A0A6H5L8B4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8B4_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 4.240e-11 Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 178 SSRMTGRGHGQQSRCCQEDGCATRPTYGKRGTKKAEFCYQHAKSGMINLVSKR 336
SSR + R GQ RCCQE+ CA RP+YG+ KKAEFC QH + GM+N+VSKR
Sbjct: 16 SSRTSARYRGQGRRCCQENCCAKRPSYGEAHGKKAEFCSQHMQPGMVNVVSKR 68
BLAST of mRNA_E-fasciculatus_F_contig12132.1664.1 vs. uniprot
Match: D7FH54_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH54_ECTSI) HSP 1 Score: 65.1 bits (157), Expect = 1.400e-9 Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 178 SSRMTGRGHGQQSRCCQEDGCATRPTYGKRGTKKAEFCYQHAKSGMINLVSKR 336
SSR + + Q RCC EDGC T P++GK G+K+AEFC QHAK GM N+ KR
Sbjct: 2 SSRKAAKYNNQGQRCCLEDGCTTWPSFGKYGSKRAEFCSQHAKPGMTNVKHKR 54
BLAST of mRNA_E-fasciculatus_F_contig12132.1664.1 vs. uniprot
Match: A0A6H5KPP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPP7_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 4.090e-8 Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 1
Query: 169 ATTSSRMTGRGHGQQSRCCQEDGCATRPTYGKRGTKKAEFCYQHAKSGMINLVSK 333
A+ S+R T R H RCCQEDGC+ + +G G+KKAEFC QHA+ M+N+V+K
Sbjct: 147 ASLSTRATTR-HSGPGRCCQEDGCSRQRRFGMAGSKKAEFCSQHAEPDMVNVVTK 200
BLAST of mRNA_E-fasciculatus_F_contig12132.1664.1 vs. uniprot
Match: A0A6H5JY32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY32_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 1.330e-7 Identity = 27/52 (51.92%), Postives = 34/52 (65.38%), Query Frame = 1
Query: 178 SSRMTGRGHGQQSRCCQEDGCATRPTYGKRGTKKAEFCYQHAKSGMINLVSK 333
S R T R GQ CQE GC T PT+GK+G+KK EFC HAK M+++ +K
Sbjct: 24 SKRNTARRRGQGRPICQEPGCTTIPTFGKKGSKKPEFCLPHAKPNMVDVHNK 75
BLAST of mRNA_E-fasciculatus_F_contig12132.1664.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE) HSP 1 Score: 52.4 bits (124), Expect = 3.480e-5 Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 1
Query: 223 CQEDGCATRPTYGKRGTKKAEFCYQHAKSGMINLVSKR 336
C + C RPTYG G+KK EFC QHA+ GM+N+ +KR
Sbjct: 64 CGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKR 101 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12132.1664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12132.1664.1 >prot_E-fasciculatus_F_contig12132.1664.1 ID=prot_E-fasciculatus_F_contig12132.1664.1|Name=mRNA_E-fasciculatus_F_contig12132.1664.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=138bp KRKLGAISKTVRRYSVRSASGREPTHTESPEAATSKRQRKASAPRTKEQGback to top mRNA from alignment at E-fasciculatus_F_contig12132:768..4134- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12132.1664.1 ID=mRNA_E-fasciculatus_F_contig12132.1664.1|Name=mRNA_E-fasciculatus_F_contig12132.1664.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3367bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12132:768..4134- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12132:768..4134- >mRNA_E-fasciculatus_F_contig12132.1664.1 ID=mRNA_E-fasciculatus_F_contig12132.1664.1|Name=mRNA_E-fasciculatus_F_contig12132.1664.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=828bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12132:768..4134- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |