mRNA_E-fasciculatus_F_contig12131.1662.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12131.1662.1 vs. uniprot
Match: D8LQE2_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE2_ECTSI) HSP 1 Score: 131 bits (329), Expect = 1.550e-34 Identity = 69/79 (87.34%), Postives = 72/79 (91.14%), Query Frame = -2
Query: 535 ADGEAGWRGCDGRTLLGAAACGDNSDKMVRALLGAGAKRDVNAVFGAANESALHVAAARGAEASCTALMIAGADPNLRD 771
ADGEAGWRGC GRTLLGAAACG+NSDKMVRALL AGA+RDVN FG NES LHV+AARGAEASCTALMIAGADPNLRD
Sbjct: 61 ADGEAGWRGCHGRTLLGAAACGNNSDKMVRALLEAGARRDVNVRFGNTNESTLHVSAARGAEASCTALMIAGADPNLRD 139
BLAST of mRNA_E-fasciculatus_F_contig12131.1662.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 124 bits (311), Expect = 6.210e-29 Identity = 205/256 (80.08%), Postives = 217/256 (84.77%), Query Frame = -2
Query: 4 ADGEAGWRGCDGRTLLGAAACGDNSDKMVRALLGAGAKRDVNAVFGAANESALHVAAARGAEASCTALMIAGADPNLRDRRERRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIVKAFLDKDSGAVHATDENGNTALHCCATVKFVGQPVGDNGDAVRVLLEAGADVNAKATDD 771
A EAGWRGCDGRTLLGAAAC N K++RALL AGAK DVN +FGA ESALH+AAARGAE + ALMIAGA+PNLR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TIVKAFLD D+ V+ATD G TALH A ++ G+ D GDAVRVLL AGADV+AK TDD
Sbjct: 64 ASAEAGWRGCDGRTLLGAAACSKNK-KILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKALMIAGANPNLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGR---DKGDAVRVLLAAGADVHAKTTDD 315
BLAST of mRNA_E-fasciculatus_F_contig12131.1662.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 108 bits (270), Expect = 2.200e-23 Identity = 177/257 (68.87%), Postives = 191/257 (74.32%), Query Frame = -2
Query: 4 EAGWRGCDGRTLLGAAACGDNSDKMVRALLGAGAKRDVNAVFGAANESALHVAAARGAEASCTALMIAGADPNLRDRRERRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----ATIVKAFLDKDSGAVHATDENGNTALHCCATVKFVGQPVGDNGDAVRVLLEAGADVNAKATDD 762
EAGWRGC GRTLLGAAA G S+KM+R LL AGA DVN +FG +ESALHVAAARGA+ +C ALMIAGADPN+RDR R PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A ++KA LDK S V ++ G ALH A+ + V D GDAVRVLL AGADVN K T+D
Sbjct: 65 EAGWRGCHGRTLLGAAALG-RSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFD---ETVRDKGDAVRVLLGAGADVNVKGTND 317
BLAST of mRNA_E-fasciculatus_F_contig12131.1662.1 vs. uniprot
Match: A0A6H5JB54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB54_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 2.140e-21 Identity = 52/65 (80.00%), Postives = 55/65 (84.62%), Query Frame = -2
Query: 577 ADGEAGWRGCDGRTLLGAAACGDNSDKMVRALLGAGAKRDVNAVFGAANESALHVAAARGAEASC 771
ADGEAGWRGCDGRTLLGAAACG+N DK+VRALL AGAK VN FG+ ESALHVAAARGAE C
Sbjct: 48 ADGEAGWRGCDGRTLLGAAACGNNIDKVVRALLTAGAKSIVNVRFGSTPESALHVAAARGAEDLC 112
BLAST of mRNA_E-fasciculatus_F_contig12131.1662.1 vs. uniprot
Match: D8LQE9_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE9_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 7.250e-20 Identity = 56/87 (64.37%), Postives = 62/87 (71.26%), Query Frame = -2
Query: 517 ADGEAGWRG--CDGRTLLGAAACGDNSDKMVRALLGAGAKRDVNAVFGAANESALHVAAARGAEASCTALMIAGADPNLRDRRERRP 771
A GE GWRG C RTLLGAAACG SDKM+ ALL AG DVNAVFG ESALHV+AARGAE + ALM AGADP+L + + P
Sbjct: 59 AGGEPGWRGWGCHERTLLGAAACGTKSDKMIWALLEAGVTDDVNAVFGTERESALHVSAARGAEEASKALMAAGADPDLGNFEDESP 145
BLAST of mRNA_E-fasciculatus_F_contig12131.1662.1 vs. uniprot
Match: A0A6H5KQY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY9_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 9.500e-20 Identity = 113/257 (43.97%), Postives = 126/257 (49.03%), Query Frame = -2
Query: 16 ADGEAGWRGCDGRTLLGAAACGDNSDKMVRALLGAGAKRDVNAVFGAANESALHVAAARGAEASCTALMIAGADPNLRDRRERRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----TIVKAFLDKDSGAVHATDENGNTALHCCATVKFVGQPVGDNGDAVRVLLEAGADVNAK 771
ADG AGWRGC GRTLLG AA D + +MVRA L AGA DVN FGA ++SAL VAAARGAE SC+ALMIAGADPN D + XXXXXXXXXXXXXXXXXXXXXXXX A TI+K FL+ + ATD+ G TALH A V +PV D+G A RVLLEAGADVNA+
Sbjct: 60 ADGSAGWRGCHGRTLLGEAARSDGN-QMVRAFLEAGATDDVNVRFGAISQSALQVAAARGAEGSCSALMIAGADPNWIDYDDTVQLPSLLHLAGAAGHHRVVRVILQYGAYVDPKAIVNETPLHCAASKGHTSCVFELLMGGADMDAVAFLEGXXXXXXXXXXXXXXXXXXXXXXXXDRCHPNLDGFSPSDIAAKRGHATILKPFLETGTNVDAATDQYGWTALHSAACVD---EPVIDDGAAARVLLEAGADVNAR 312
BLAST of mRNA_E-fasciculatus_F_contig12131.1662.1 vs. uniprot
Match: D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 1.090e-19 Identity = 141/256 (55.08%), Postives = 151/256 (58.98%), Query Frame = -2
Query: 16 ADGEAGWRGCDGR--TLLGAAACGDNSDKMVRALLGAGAKRDVNAVFGAANESALHVAAARGAEASCTALMIAGADPNLRDRRERRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ATIVKAFLDKDSGAVHATDENGNTALHCCATVKFVGQPVGDNGDAVRVLLEAGADVNAK 771
A GE GW+G R TLLGAAACG+ SD MV+ALL AG VN FGA ESALHV ARGAE + ALM+AGADPNL + P XXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A ++KAFLDKDS V ATD G TALH A +V + V DNGDAVR LLEAGADVN K
Sbjct: 61 AGGEPGWQGWGHRERTLLGAAACGNKSDVMVQALLEAGETEFVNTSFGATRESALHVTVARGAEDASKALMMAGADPNLGNVDGDSPLHLAAEAGHHRVIGILLLRKEAQSADPMNLFLETXXXXXXXXXXXLCISELLMGGADKDVTDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGNAAMLKAFLDKDSREVDATDGRGWTALHYAA---YVDRSVHDNGDAVRALLEAGADVNVK 313
BLAST of mRNA_E-fasciculatus_F_contig12131.1662.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 2.470e-19 Identity = 56/77 (72.73%), Postives = 62/77 (80.52%), Query Frame = -2
Query: 535 GEAGWRGCDGRTLLGAAACGDNSDKMVRALLGAGAKRDVNAVFGAANESALHVAAARGAEASCTALMIAGADPNLRD 765
GE GWRGC+GRTLLGAAA G SDK+VRALL AGA DVN +FG +SALHVAAARGAE + ALM+AGADPNL D
Sbjct: 66 GERGWRGCNGRTLLGAAAWG-KSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFD 141
BLAST of mRNA_E-fasciculatus_F_contig12131.1662.1 vs. uniprot
Match: A0A6H5JGV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV4_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 4.990e-19 Identity = 52/71 (73.24%), Postives = 57/71 (80.28%), Query Frame = -2
Query: 535 GCDGRTLLGAAACGDNSDKMVRALLGAGAKRDVNAVFGAANESALHVAAARGAEASCTALMIAGADPNLRD 747
GC GRTLLG+AA G+ SDKMVRALL AK DVN +FGA ESALHVAAARGAE + ALM+AGADPN RD
Sbjct: 38 GCHGRTLLGSAAWGNESDKMVRALLTGEAKGDVNVLFGATRESALHVAAARGAEEASRALMMAGADPNRRD 108
BLAST of mRNA_E-fasciculatus_F_contig12131.1662.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 1.420e-18 Identity = 98/252 (38.89%), Postives = 107/252 (42.46%), Query Frame = -2
Query: 4 AGWRGCDGRTLLGAAACGDNSDKMVRALLGAGAKRDVNAVFGAANESALHVAAARGAEASCTALMIAGADPNLRDRRERRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATIVKAFLDKDSGAVHATDENGNTALHCCATVKFVGQPVGDNGDAVRVLLEAGADVNAKATDD 759
AGWRGC+GRTLLGAAA G S+KMVR L AGA DVN +FG E ALMI GADPN+RDRR+R P XXXXXXXXXXXX A +VKA LDKDSG V ATD G ALH A++ PV DNGDAVRVLL AGADV+AK T D
Sbjct: 66 AGWRGCNGRTLLGAAAFG-RSEKMVRTTLTAGATDDVNVLFGGERE----------------ALMIDGADPNVRDRRKRSPLHLAAVAGHHRVVGMLLLNRACVHAKTASQXXXXXXXXXXXXALCISELLLGANSHLEAVQELLAAGANYSLRTNGSRSPLEIAANRGQ-------------------ADVVKALLDKDSGEVDATDGGGWAALHYAASIDG---PVRDNGDAVRVLLRAGADVSAKGTKD 278 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12131.1662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12131.1662.1 >prot_E-fasciculatus_F_contig12131.1662.1 ID=prot_E-fasciculatus_F_contig12131.1662.1|Name=mRNA_E-fasciculatus_F_contig12131.1662.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=176bp MPRLAPAARSSATASRWLFTAALNSGVSPLSSSMSLSAPPSKSPEMHSVWback to top mRNA from alignment at E-fasciculatus_F_contig12131:336..1107+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12131.1662.1 ID=mRNA_E-fasciculatus_F_contig12131.1662.1|Name=mRNA_E-fasciculatus_F_contig12131.1662.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=772bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12131:336..1107+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12131:336..1107+ >mRNA_E-fasciculatus_F_contig12131.1662.1 ID=mRNA_E-fasciculatus_F_contig12131.1662.1|Name=mRNA_E-fasciculatus_F_contig12131.1662.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1056bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12131:336..1107+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |