mRNA_E-fasciculatus_F_contig12118.1650.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12118.1650.1 vs. uniprot
Match: D8LDT3_ECTSI (ATP-binding cassette transporter, subfamily B, member 4, group TAP protein PpABCB4 MET type n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDT3_ECTSI) HSP 1 Score: 358 bits (918), Expect = 8.540e-114 Identity = 174/190 (91.58%), Postives = 179/190 (94.21%), Query Frame = 1
Query: 67 LAERKKSAFLVVMFAVSTAMQVYTGVKCDRFHFTK-VPEGVLMGIGVLWLNAMVGALTQLVADATMEEGLLAPSLHPHRLYPGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISNTARIALPNFQGGILDK 633
LAERKKSAFLVVMFA+STAMQVYTGVKC RF FTK VPEGVLMGIGVLWLNAMV AL QLVADATMEEGLL PSLHPHRL+PGS AGHRCD CQQRIKSQDAK WRCKLCDFDLCRSCYEKKDRRGAEGALRGDKG+RDE +L TLTYFKRALRLAGPHWPFF+VAFACLAISNTARIALPNFQGGILDK
Sbjct: 268 LAERKKSAFLVVMFALSTAMQVYTGVKCVRFRFTKEVPEGVLMGIGVLWLNAMVWALNQLVADATMEEGLLEPSLHPHRLFPGSMAGHRCDICQQRIKSQDAKGWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGLRDEKNLSTLTYFKRALRLAGPHWPFFMVAFACLAISNTARIALPNFQGGILDK 457
BLAST of mRNA_E-fasciculatus_F_contig12118.1650.1 vs. uniprot
Match: A0A7S0LVH6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LVH6_9CRYP) HSP 1 Score: 169 bits (427), Expect = 2.550e-46 Identity = 87/193 (45.08%), Postives = 120/193 (62.18%), Query Frame = 1
Query: 70 AERKKSAFLVVMFAVSTAMQVYTGVKCDRFHF-TKVPEGVLMGIGVLWLNAMVGALTQLVADATMEEGL---LAPSLHPHRL-YPGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISNTARIALPNFQGGILDK 633
A ++S F +F VSTA QV+ GVKC F F ++ +G+LMG GVLW+NAM +L +LV +G+ P LHPH L H CD C R+ D +A+RCKLCDFDLC C+ +KD+R AEG LRGDKG++ +++ TL+YF+RA+ LA W F ++ L ++N A++ PN QG ILD
Sbjct: 176 ARHRQSFFTGALFVVSTAAQVFIGVKCIGFKFPVELEQGLLMGSGVLWINAMTWSLRELVKSHRQADGIGYVRVPELHPHSLCLDPRVHNHYCDVCGLRMS--DGRAYRCKLCDFDLCVRCFSRKDQRTAEGVLRGDKGIKLTSNVSTLSYFRRAVALARREWLLFFLSMTMLLLNNAAQLWAPNLQGRILDS 366
BLAST of mRNA_E-fasciculatus_F_contig12118.1650.1 vs. uniprot
Match: A0A7S1DV78_HEMAN (Hypothetical protein (Fragment) n=5 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DV78_HEMAN) HSP 1 Score: 161 bits (407), Expect = 2.480e-42 Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = 1
Query: 112 VSTAMQVYTGVKCDRFHFT-KVPEGVLMGIGVLWLNAMVGALTQLVADATMEEGL---LAPSLHPHRL-YPGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISNTARIALPNFQGGILD 630
+S+A Q++ G+KC F F + +G LMG+GVLW+N MV + +++V EGL P LHPH L H CD+C RI + KA+RCKLCDFDLC C+ +KD R +EG LRGDKGVR E+ L T+ YFKRAL LA W F++A L +N ++ PN QG ILD
Sbjct: 143 ISSAAQLFVGLKCIGFKFPDEAMQGTLMGLGVLWINIMVWSTSEVVKAHNKAEGLGQAKIPELHPHTLTLHRKVHNHWCDKCSTRI--DNGKAYRCKLCDFDLCMRCFTRKDLRTSEGLLRGDKGVRREDPLTTMDYFKRALGLAKREWALFLLALLSLTSNNLLQLVSPNLQGSILD 318
BLAST of mRNA_E-fasciculatus_F_contig12118.1650.1 vs. uniprot
Match: R1C256_EMIHU (ABC transmembrane type-1 domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C256_EMIHU) HSP 1 Score: 155 bits (393), Expect = 2.500e-40 Identity = 84/198 (42.42%), Postives = 106/198 (53.54%), Query Frame = 1
Query: 61 KTLAERKKSAFLVVMFAVSTAMQVYTGVKCDRFH-------FTKVPEGVLMGIGVLWLNAMVGALTQLVADATMEEGLLAPSLHPHRLY-PGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISNTARIALPNFQGGILD 630
K AE +K + +F VSTA QVY GVKC F +GVL G+ VL +N L +LV T E G P H H LY S H+CD C+ + + +RC LCD+D C +C+ KKDR EG LRGDKGV+ L T YF+R L+LA P P F VA C+ ++ R+ LPNFQG I D
Sbjct: 397 KEAAEVRKGLLVAAIFGVSTAAQVYVGVKCISFRGEWERDAHVLTAQGVLFGVAVLLINVESWLLKRLVHALTAEVGFFVPEFHSHPLYFHPSVPNHKCDLCRNKT----GQVYRCPLCDWDACPACFNKKDRSTGEGVLRGDKGVKSGGALTTSQYFRRGLKLALPQLPLFGVALLCVVTTSALRLFLPNFQGQIFD 590
BLAST of mRNA_E-fasciculatus_F_contig12118.1650.1 vs. uniprot
Match: A0A7S0U4T8_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U4T8_HEMAN) HSP 1 Score: 154 bits (390), Expect = 6.120e-40 Identity = 79/182 (43.41%), Postives = 112/182 (61.54%), Query Frame = 1
Query: 100 VMFAVSTAMQVYTGVKCDRFHFT-KVPEGVLMGIGVLWLNAMVGALTQLVADATMEEGL---LAPSLHPHRL-YPGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISNTARIALPNFQGGILD 630
+M S+A Q++ G+KC F F + +G+LMG+GV+W+N MV + +++V EGL P LHPH L + H C +C RI KA+RCKLCDFD+C C+ +KD R +EG LRGDKG+R E+ L T+ YF+RAL LA W F++A L+ ++ ++ PN QG ILD
Sbjct: 8 IMLFASSAAQLFVGLKCIGFQFPDEAVQGLLMGLGVVWINIMVWSTSEVVKAHNKSEGLGKAKIPELHPHTLTLHRNVHAHWCGKCFTRIDC--GKAYRCKLCDFDVCMRCFTRKDLRTSEGLLRGDKGIRREDPLSTIDYFRRALGLARGEWALFLLALVSLSCNSALQLVSPNLQGSILD 187
BLAST of mRNA_E-fasciculatus_F_contig12118.1650.1 vs. uniprot
Match: A0A7S0YQB2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YQB2_9CRYP) HSP 1 Score: 155 bits (391), Expect = 6.660e-40 Identity = 83/195 (42.56%), Postives = 119/195 (61.03%), Query Frame = 1
Query: 61 KTLAERKKSAFLVVMFAVSTAMQVYTGVKCDRFHFT-KVPEGVLMGIGVLWLNAMVGALTQLVADATMEEGL---LAPSLHPHRL-YPGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISNTARIALPNFQGGILD 630
K + R+ +++FA S+A Q++ G+KC F F + +G+LMG+GV+W+N MV + +++V EGL P LHPH L + H C +C RI KA+RCKLCDFD+C C+ +KD R +EG LRGDKG+R E+ L T+ YFKRAL LA W ++A A L+ ++ ++ PN QG ILD
Sbjct: 198 KVVVMRQNMVGGIMLFA-SSAAQLFVGLKCIGFQFPDEAVQGLLMGLGVVWINIMVWSTSEVVKAHNKSEGLGKAKIPELHPHTLTLHRNVHNHWCGKCFTRIDC--GKAYRCKLCDFDVCMRCFTRKDLRTSEGLLRGDKGIRREDPLSTIDYFKRALGLARGEWALLLLALASLSCNSALQLVSPNLQGSILD 389
BLAST of mRNA_E-fasciculatus_F_contig12118.1650.1 vs. uniprot
Match: A0A7S3TF98_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TF98_EMIHU) HSP 1 Score: 154 bits (389), Expect = 1.210e-39 Identity = 83/198 (41.92%), Postives = 105/198 (53.03%), Query Frame = 1
Query: 61 KTLAERKKSAFLVVMFAVSTAMQVYTGVKCDRFH-------FTKVPEGVLMGIGVLWLNAMVGALTQLVADATMEEGLLAPSLHPHRLY-PGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISNTARIALPNFQGGILD 630
K AE +K + +F VSTA QVY GVKC F +GV G+ VL +N L +LV T E G P H H LY S H+CD C+ + + +RC LCD+D C +C+ KKDR EG LRGDKGV+ L T YF+R L+LA P P F VA C+ ++ R+ LPNFQG I D
Sbjct: 172 KEAAEVRKGLLVAAIFGVSTAAQVYVGVKCISFRGEWERDAHVLTAQGVFFGVAVLLINVESWLLKRLVHALTAEVGFFVPEFHSHPLYFHPSVPNHKCDLCRNKT----GQVYRCPLCDWDACPACFNKKDRSTGEGVLRGDKGVKSGGALTTSQYFRRGLKLALPQLPLFGVALLCVVTTSALRLFLPNFQGQIFD 365
BLAST of mRNA_E-fasciculatus_F_contig12118.1650.1 vs. uniprot
Match: A0A7S2JGA5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JGA5_9EUKA) HSP 1 Score: 138 bits (347), Expect = 1.130e-34 Identity = 73/185 (39.46%), Postives = 106/185 (57.30%), Query Frame = 1
Query: 103 MFAVSTAMQVYTGVKCDRFHFT-------KVPEGVLMGIGVLWLNAMVGALTQLVADATMEEGLLAPSLHPHRLY--PGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISNTARIALPNFQGGILD 630
MF V++A QVY G+KC F K+ + VL + +N +LV T EEG P HPHRLY P T HRCD C+ RI +++ CK+C++D C +C+ KKD+ EG +RGDKGV+D +L Y + LRL P P F++A + LA++++ R+ +PN+QG I+D
Sbjct: 1 MFVVASAAQVYVGIKCISFDCEWQQRPTLKLVQTVLFLSTLALVNLESFLSKRLVMVCTKEEGFFIPEFHPHRLYFQPNLT-NHRCDMCRNRI----TESYICKMCNWDCCAACFNKKDKATGEGIIRGDKGVKDVRNLSFGRYLAKGLRLIAPELPLFLLALSLLAVNSSIRLFMPNYQGTIMD 180
BLAST of mRNA_E-fasciculatus_F_contig12118.1650.1 vs. uniprot
Match: A0A8J5X3K8_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X3K8_DIALT) HSP 1 Score: 139 bits (349), Expect = 2.870e-34 Identity = 72/194 (37.11%), Postives = 104/194 (53.61%), Query Frame = 1
Query: 61 KTLAERKKSAFLVVMFAVSTAMQVYTGVKCDRFHFTKVPE---GVLMGIGVLWLNAMVGALTQLVADATMEEGLLAPSLHPHRLYPGST-AGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVRDENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISNTARIALPNFQGGILD 630
K A ++ + +F VSTA Q++ G+K +F F E G L+GI VL N + + V +AT E+G + P HPH LY + A H CD C +R + C+ C FD+C C+ +KD+R +EG LR D+G ++ + T Y R L H P F+VA CL + A++ LPN+QG ILD
Sbjct: 197 KNRANARRQGMVGAVFLVSTAFQMFVGIKTIQFDFVAAREREDGALLGILVLLTNVSTWFVVRAVREATKEDGFVVPEFHPHALYHRTNLALHHCDLCSER----GTTFFSCRQCGFDVCPRCFARKDKRTSEGLLRNDRGFQEPAEFTTWQYVTRTASLVRGHVPLFLVAIGCLVATTLAQLFLPNYQGAILD 386
BLAST of mRNA_E-fasciculatus_F_contig12118.1650.1 vs. uniprot
Match: A0A812TFL8_9DINO (ABCB1 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812TFL8_9DINO) HSP 1 Score: 135 bits (341), Expect = 3.980e-34 Identity = 71/192 (36.98%), Postives = 105/192 (54.69%), Query Frame = 1
Query: 70 AERKKSAFLVVMFAVSTAMQVYTGVKCDRFHFTK---VPEGVLMGIGVLWLNAMVGALTQLVADATMEEGLLAPSLHPHRLY-PGSTAGHRCDQCQQRIKSQDAKAWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGVR-DENDLPTLTYFKRALRLAGPHWPFFVVAFACLAISNTARIALPNFQGGILD 630
A+R+K ++V+FA+ST M Y G+KC +H+ +G L + ++ +N L L+ T E+G L P +H H L+ H CD C ++K A+RC+ CDFDLC CY++KD+ A+G G + VR D + T TYFKR ++L+ WP V A CL ++ +I PN QG I D
Sbjct: 146 ADRRKEIIMLVLFAISTGMSFYNGIKCIVYHYDPRFLALQGTLQALTMVMINVEYFMLKNLLNKFTEEQGELIPHIHMHPLFFETGLKCHGCDVCGDQMKGPHYIAYRCRTCDFDLCPRCYKQKDKHSAKGF--GARSVRRDGEQITTWTYFKRIVQLSMEFWPTLVAAVTCLVVTQGLQIFAPNVQGSIFD 335 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12118.1650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12118.1650.1 >prot_E-fasciculatus_F_contig12118.1650.1 ID=prot_E-fasciculatus_F_contig12118.1650.1|Name=mRNA_E-fasciculatus_F_contig12118.1650.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=212bp REKEEAEQAAAVAAEAAEAAKTLAERKKSAFLVVMFAVSTAMQVYTGVKCback to top mRNA from alignment at E-fasciculatus_F_contig12118:55..2322- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12118.1650.1 ID=mRNA_E-fasciculatus_F_contig12118.1650.1|Name=mRNA_E-fasciculatus_F_contig12118.1650.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2268bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12118:55..2322- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12118:55..2322- >mRNA_E-fasciculatus_F_contig12118.1650.1 ID=mRNA_E-fasciculatus_F_contig12118.1650.1|Name=mRNA_E-fasciculatus_F_contig12118.1650.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1272bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12118:55..2322- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |