prot_E-fasciculatus_F_contig12116.1649.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12116.1649.1
Unique Nameprot_E-fasciculatus_F_contig12116.1649.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length209
Homology
BLAST of mRNA_E-fasciculatus_F_contig12116.1649.1 vs. uniprot
Match: D8LNG3_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG3_ECTSI)

HSP 1 Score: 366 bits (940), Expect = 3.260e-127
Identity = 187/212 (88.21%), Postives = 197/212 (92.92%), Query Frame = 0
Query:    1 LNVAGTVAVYLHETQGTGGSFLFGNFMVSTYTTLMQGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIASRLGLPSVLQVDPYYFSAGGDGALLAVVAWYCASFPSSQVFL----VPAGVAAALYLGATLGKVVSNGAGLPSLGAPTQEIWRTLGAAAAGVMVALASRGRGGGRHKVIQKY 208
            LNVAGTVA+YL+E+QGTGG FLFGNFMVSTYTTLMQGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIASRLGLPSVLQVDPYYFS+GG GA LAV+AWYCASFPSSQ+ L    V  GVA ALYLGATL +VVSNGAG+P LG PTQEIWRTLGAAAAGVMVALASRGRGGGR+K IQ+Y
Sbjct:    9 LNVAGTVAMYLYESQGTGGPFLFGNFMVSTYTTLMQGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIASRLGLPSVLQVDPYYFSSGGSGATLAVLAWYCASFPSSQIILLVVPVQTGVAGALYLGATLYQVVSNGAGVPFLGGPTQEIWRTLGAAAAGVMVALASRGRGGGRYKFIQRY 220          
BLAST of mRNA_E-fasciculatus_F_contig12116.1649.1 vs. uniprot
Match: A0A6H5JLS0_9PHAE (Rhomboid domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS0_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 1.010e-124
Identity = 186/212 (87.74%), Postives = 195/212 (91.98%), Query Frame = 0
Query:    1 LNVAGTVAVYLHETQGTGGSFLFGNFMVSTYTTLMQGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIASRLGLPSVLQVDPYYFSAGGDGALLAVVAWYCASFPSSQVFL----VPAGVAAALYLGATLGKVVSNGAGLPSLGAPTQEIWRTLGAAAAGVMVALASRGRGGGRHKVIQKY 208
            LNVAGTVA+YLHETQG GG FLFGNFMVSTYTTLMQGRLHTL TSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIASRLGLPSVLQVDPYYFS+GG GA LAV+AWYCASFPSSQ+ L    V  GVA ALYLGATL +VVSNGAG+P LG PTQEIWRTLGAAAAGV+VALASRGRGGGR+K IQ+Y
Sbjct:  144 LNVAGTVAIYLHETQGAGGPFLFGNFMVSTYTTLMQGRLHTLLTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIASRLGLPSVLQVDPYYFSSGGSGATLAVLAWYCASFPSSQIILLVVPVQTGVAGALYLGATLYQVVSNGAGVPFLGGPTQEIWRTLGAAAAGVVVALASRGRGGGRYKFIQRY 355          
BLAST of mRNA_E-fasciculatus_F_contig12116.1649.1 vs. uniprot
Match: A0A8K0JHW0_9TREE (Uncharacterized protein n=2 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JHW0_9TREE)

HSP 1 Score: 69.7 bits (169), Expect = 1.650e-10
Identity = 67/188 (35.64%), Postives = 84/188 (44.68%), Query Frame = 0
Query:   25 NFMVSTYTTLMQGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIASRLGLPSVLQVDPYYFSAGGDGALLAVVAWYCASFPSSQV---FLVPAGVAAA--------LYLGATLGKVVSNGAGLPSLGAPTQEIWRTLGAAAAGVMVALASRGRGGGR 201
            NF+VS    L  GRLHTL T  FSHSN  + A+    +Y +GP     LG   FL LYL GG  S +  +A   + S     S       + S G  GA+ A +A+Y A FP +Q    F+VP    AA        LY        V++ AG              +G   AGV  A  SRGRGG R
Sbjct:  183 NFIVSE-ANLAAGRLHTLLTCCFSHSNTGHIALNMLGLYFIGPATAGLLGPASFLGLYLGGGIVSSMVSLAWHRMMSSNRSKS-------HGSEGASGAIYASLAYYAAMFPQAQFLLFFVVPLPAWAAVGGIFAYDLYSSIRSPMAVTDSAG-------------HVGGLLAGVAYAFRSRGRGGPR 349          
BLAST of mRNA_E-fasciculatus_F_contig12116.1649.1 vs. uniprot
Match: E6QYZ2_CRYGW (Rhomboid domain-containing protein n=3 Tax=Cryptococcus gattii species complex TaxID=1884637 RepID=E6QYZ2_CRYGW)

HSP 1 Score: 62.4 bits (150), Expect = 4.780e-8
Identity = 43/122 (35.25%), Postives = 60/122 (49.18%), Query Frame = 0
Query:   21 FLFGNFMVSTYTTLMQGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIASRLGLPSVLQVDPYYFSAGGDGALLAVVAWYCASFPSSQVFL 142
            FL  NF+++    +  GR+ TL TS FSHSN  +  +    +Y L P A   +G   FL LYL  G FS L  +     +             ++ S G  GA+ A +A+Y A FP+SQV L
Sbjct:  159 FLRNNFILNE-VNVFSGRIWTLVTSAFSHSNGTHIFVNCLGLYFLAPAAASIMGSASFLGLYLGAGVFSSLVSLGYHRFSQHR----------WWGSEGASGAIYACLAYYGALFPNSQVLL 269          
BLAST of mRNA_E-fasciculatus_F_contig12116.1649.1 vs. uniprot
Match: Q5KLG1_CRYNJ (Rhomboid domain-containing protein n=4 Tax=Cryptococcus neoformans TaxID=5207 RepID=Q5KLG1_CRYNJ)

HSP 1 Score: 61.6 bits (148), Expect = 9.970e-8
Identity = 45/122 (36.89%), Postives = 62/122 (50.82%), Query Frame = 0
Query:   21 FLFGNFMVSTYTTLMQGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIASRLGLPSVLQVDPYYFSAGGDGALLAVVAWYCASFPSSQVFL 142
            FL  NF+++    +  GR+ TL TS FSHSN  +  +    +Y L P A   +G   FL LYL  G FS L  + G    SR           ++ S G  GA+ A +A+Y A FP+SQV +
Sbjct:  159 FLRNNFILNE-VNVFSGRIWTLVTSAFSHSNGTHIFVNCLGLYFLAPAAASIMGSASFLGLYLGAGVFSSLVSL-GYHRFSR---------HRWWGSEGASGAIYACLAYYGALFPNSQVLM 269          
BLAST of mRNA_E-fasciculatus_F_contig12116.1649.1 vs. uniprot
Match: A0A2D9IL33_9GAMM (Rhomboid family intramembrane serine protease n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2D9IL33_9GAMM)

HSP 1 Score: 55.5 bits (132), Expect = 8.630e-6
Identity = 42/141 (29.79%), Postives = 59/141 (41.84%), Query Frame = 0
Query:    1 LNVAGTVAVYLHETQ-GTGGSFLFGNFMVSTYTTLMQGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIASRLGLPSVLQVDPYYFSAGGDGALLAVVAWYCASFPSSQV 140
            L +A  V V+L +   G     L   F V   T      LHT+ TS F H    +      ++Y  G     HLGRR FL  Y LGG F+   Q      A RL +P +          G  G + A++  Y   +P+++V
Sbjct:   21 LLIAINVLVFLFQLSLGPSNQALINEFGVRPSTFSDFTNLHTIITSAFLHGGFMHLISNMVVLYIYGDNVESHLGRRNFLIFYFLGGLFAAYFQSL---FAGRLDIPMI----------GASGCIAAIMGAYFVLYPTAKV 148          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12116.1649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LNG3_ECTSI3.260e-12788.21Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JLS0_9PHAE1.010e-12487.74Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
A0A8K0JHW0_9TREE1.650e-1035.64Uncharacterized protein n=2 Tax=Filobasidium flori... [more]
E6QYZ2_CRYGW4.780e-835.25Rhomboid domain-containing protein n=3 Tax=Cryptoc... [more]
Q5KLG1_CRYNJ9.970e-836.89Rhomboid domain-containing protein n=4 Tax=Cryptoc... [more]
A0A2D9IL33_9GAMM8.630e-629.79Rhomboid family intramembrane serine protease n=5 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 36..162
e-value: 4.2E-8
score: 33.3
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 1..197
e-value: 2.9E-7
score: 32.1
NoneNo IPR availablePANTHERPTHR43731FAMILY NOT NAMEDcoord: 24..198
NoneNo IPR availablePANTHERPTHR43731:SF5PRESENILINS-ASSOCIATED RHOMBOID-LIKE PROTEIN, MITOCHONDRIALcoord: 24..198
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 102..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..101
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 158..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..157
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 71..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..194
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 134..139
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 195..208
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 6..192
NoneNo IPR availableTMHMMTMhelixcoord: 78..100
NoneNo IPR availableTMHMMTMhelixcoord: 177..199
NoneNo IPR availableTMHMMTMhelixcoord: 115..133
NoneNo IPR availableTMHMMTMhelixcoord: 140..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12116contigE-fasciculatus_F_contig12116:333..3634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12116.1649.1mRNA_E-fasciculatus_F_contig12116.1649.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12116 333..3634 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12116.1649.1 ID=prot_E-fasciculatus_F_contig12116.1649.1|Name=mRNA_E-fasciculatus_F_contig12116.1649.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=209bp
LNVAGTVAVYLHETQGTGGSFLFGNFMVSTYTTLMQGRLHTLFTSNFSHS
NLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIA
SRLGLPSVLQVDPYYFSAGGDGALLAVVAWYCASFPSSQVFLVPAGVAAA
LYLGATLGKVVSNGAGLPSLGAPTQEIWRTLGAAAAGVMVALASRGRGGG
RHKVIQKY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035952Rhomboid-like_sf
IPR022764Peptidase_S54_rhomboid_dom