mRNA_E-fasciculatus_F_contig12110.1647.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12110.1647.1 vs. uniprot
Match: D7FZQ4_ECTSI (Helicase ATP-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZQ4_ECTSI) HSP 1 Score: 549 bits (1414), Expect = 1.780e-184 Identity = 275/277 (99.28%), Postives = 275/277 (99.28%), Query Frame = 1
Query: 1 RLPPLSRFTTGWKLDEWQKRVLRQVDKKNSAIVCAPTSSGKTIISTYVTVAAGASGKILFVVPTEPLVWQVAALFNKLLRGQQVAICMDQIYYRPDIELRTIVGTPMALETALTKLRGPVGDEVVGKLDYTQMKGGFDFDYAVYDEVHSLDSEEGDALQRLIRAVNCNFLALSATIGNAQQLKDWWTEVQGEQARDLEVIEAPAGAGEGRRGFVPPSGEVYLEEHSGRFINLQRYVWMGSTFVNLHPCSAMSVELLQSGRTEEVSLSFTPHDTYKLW 831
RLPPLSRFTTGWKLDEWQKRVLRQVDKKNSAIVCAPTSSGKTIISTYVTVAAGASGKILFVVPTEPLVWQVAALFNKLLRGQ VAICMDQIYYRPDIELRTIVGTPMALETALTKLRG VGDEVVGKLDYTQMKGGFDFDYAVYDEVHSLDSEEGDALQRLIRAVNCNFLALSATIGNAQQLKDWWTEVQGEQARDLEVIEAPAGAGEGRRGFVPPSGEVYLEEHSGRFINLQRYVWMGSTFVNLHPCSAMSVELLQSGRTEEVSLSFTPHDTYKLW
Sbjct: 287 RLPPLSRFTTGWKLDEWQKRVLRQVDKKNSAIVCAPTSSGKTIISTYVTVAAGASGKILFVVPTEPLVWQVAALFNKLLRGQ-VAICMDQIYYRPDIELRTIVGTPMALETALTKLRGAVGDEVVGKLDYTQMKGGFDFDYAVYDEVHSLDSEEGDALQRLIRAVNCNFLALSATIGNAQQLKDWWTEVQGEQARDLEVIEAPAGAGEGRRGFVPPSGEVYLEEHSGRFINLQRYVWMGSTFVNLHPCSAMSVELLQSGRTEEVSLSFTPHDTYKLW 562
BLAST of mRNA_E-fasciculatus_F_contig12110.1647.1 vs. uniprot
Match: A0A836CAV0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV0_9STRA) HSP 1 Score: 352 bits (903), Expect = 5.040e-110 Identity = 179/281 (63.70%), Postives = 219/281 (77.94%), Query Frame = 1
Query: 1 RLPPLSRFTTGWKLDEWQKRVLRQVDKKNSAIVCAPTSSGKTIISTYVTVAAGASGKILFVVPTEPLVWQVAALFNKLLRGQQVAICMDQIYYRPDIELRTIVGTPMALETALTKLRGPVGDEVVGKLDYTQMKGGFDFDYAVYDEVHSLDSEEGDALQRLIRAVNCNFLALSATIGNAQQLKDWWTEVQGEQARDLEVIEAPAGAGEGRRGFVPPSGEVYLEEHSGRFINLQRYVWMGST--FVNLHPCSAMSVELL--QSGRTEEVSLSFTPHDTYKLW 831
RLPPLSRF+TGWKLD+WQKRVL VD+ SAIVCAPTSSGKT+IS+YV + AS ++LFVVPTEPLVWQVAALF+KLL+G V +CMDQ+++RPDI LR IVGTP LETAL+KLRGP GDE + K+DY QM+GGF FDYA++DEVHSLD +EG ALQRLI+ ++CNFLALSATIGNAQ+LK+WW ++G+Q D+E+IEA A G ++LEEHSGRFINLQR VWMG F LHP +A+++++L + G SL FTP DTY LW
Sbjct: 219 RLPPLSRFSTGWKLDDWQKRVLAVVDRHQSAIVCAPTSSGKTVISSYVASDSAAS-RVLFVVPTEPLVWQVAALFHKLLKGS-VGLCMDQMHFRPDINLRVIVGTPQPLETALSKLRGPAGDEALNKVDYAQMQGGFAFDYAIFDEVHSLDGDEGAALQRLIQGLSCNFLALSATIGNAQELKEWWEGIRGQQLEDVEMIEA-AQEGPSDEPKQLTDASIFLEEHSGRFINLQRMVWMGDAGQFKPLHPLAAVTLDMLKVEGGCFHTFSLPFTPQDTYALW 496
BLAST of mRNA_E-fasciculatus_F_contig12110.1647.1 vs. uniprot
Match: A0A7S4A060_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A060_9STRA) HSP 1 Score: 264 bits (675), Expect = 1.970e-77 Identity = 146/281 (51.96%), Postives = 187/281 (66.55%), Query Frame = 1
Query: 1 RLPPLSRFTTGWKLDEWQKRVLRQVDKKNSAIVCAPTSSGKTIISTYVTVAAGASGKILFVVPTEPLVWQVAALFNKLLRGQ-QVAICMDQIYYRPDIEL-RTIVGTPMALETALTKLRGPVGDEVVG-KLDYTQMKGGFDFDYAVYDEVHSLDSEEGDALQRLIRAVNCNFLALSATIGNAQQLKDWWTEVQGEQARDLEVIEAPAGAGEGRRGFVPPSGEVYLEEHSGRFINLQRYVW-MGSTFVNLHPCSAMSVELLQSGRTEEVSLSFTPHDTYKLW 831
RLPPLSRF GW+LD WQK+VLR +D SA+VCAPTSSGKT+ISTY VA + ++LFVVPTEPLVWQVAA+F KLL+G +VA+ +Q+ YRP + R +VGTP+ALE++L K+RG VG+E + DY Q+ GGFDFDYAV+DEVH+LD +EG ALQRL+R V C LALSATIGNA +L+DWW V+ + A P V L EH+GRFIN+Q V LHPC+A+ V L E+++ + TP D+ L+
Sbjct: 217 RLPPLSRFLKGWRLDAWQKKVLRHIDNGKSAVVCAPTSSGKTVISTYTCVA---NERVLFVVPTEPLVWQVAAMFEKLLQGSARVALATNQLAYRPSEDRSRVVVGTPLALESSLVKIRGQVGEECTSTRWDYAQLDGGFDFDYAVFDEVHALDGDEGAALQRLVRYVTCPTLALSATIGNASELRDWWQCVRDDAA---------------------PGDAVELVEHAGRFINVQNLVLDPRGQLAALHPCAALKVPQLLGD--EKLAFAMTPADSKSLY 471
BLAST of mRNA_E-fasciculatus_F_contig12110.1647.1 vs. uniprot
Match: F0YFT5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFT5_AURAN) HSP 1 Score: 236 bits (602), Expect = 3.900e-67 Identity = 136/280 (48.57%), Postives = 179/280 (63.93%), Query Frame = 1
Query: 1 RLPPLSRFTTGWKLDEWQKRVLRQVDKKNSAIVCAPTSSGKTIISTYVTVAAGASGKILFVVPTEPLVWQVAALFNKLLRGQQVAICMDQIYYRP-DIELRTIVGTPMALETALTKLRGPVGDEVVGKL-DYTQMKGGFDFDYAVYDEVHSLDSEEGDALQRLIRAVNCNFLALSATIGNAQQLKDWWTEVQGEQARDLEVIEAPAGAGEGRRGFVPPSGEVYLEEHSGRFINLQRYVWMGSTFVN-LHPCSAMSVELLQSGRTEEVSLSFTPHDTYKLW 831
RLPPLS F W+LD WQK+VLR +D SA+VCAPTSSGKT+ISTY VA + ++LFVVPTEPL VA+ +Q+ YRP + + R +VGTP+ALE++L K+RG VGDE K DY Q+ GGFDFDYAV+DEVH+LD +EG ALQRL+R+V C LALSATIGNA QL+ WW V+ D +++ V S V L EHSGRFIN+Q V ++ LHPC+A++ + L E+++ + TP D+ +L+
Sbjct: 982 RLPPLSPFLKSWRLDAWQKKVLRHIDAGKSAVVCAPTSSGKTVISTYTCVA---NDRVLFVVPTEPL----------------VALATNQLAYRPSEDKSRIVVGTPLALESSLVKIRGQVGDEATSKRWDYAQLDGGFDFDYAVFDEVHALDGDEGAALQRLVRSVTCPTLALSATIGNAAQLQGWWQGVRD----DCALVDG-----------VESSDRVELVEHSGRFINVQNLVLDPDAKLDRLHPCAALTTDQLLGD--EKIAFAMTPADSKQLY 1225
BLAST of mRNA_E-fasciculatus_F_contig12110.1647.1 vs. uniprot
Match: A0A448YY16_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY16_9STRA) HSP 1 Score: 234 bits (598), Expect = 1.080e-66 Identity = 140/289 (48.44%), Postives = 186/289 (64.36%), Query Frame = 1
Query: 1 RLPPLSRFTTGWKLDEWQKRVLRQVDKKNSAIVCAPTSSGKTIISTYVTVAAGASGKILFVVPTEPLVWQVAALFNKLLRGQQVAICMDQIYYRPDI-ELRTIVGTPMALETALTKLRGPVGDEVV-GKLDYTQMKGGFD-FDYAVYDEVHSLDSEEGDALQRLIRAVNCNFLALSATIGNAQQLKDWWTEVQGEQARDLEVIEAPAGAGEGRRGFVPPSGEVYLEEHSGRFINLQRYVWM------GST---FVNLHPCSAMSVELLQSGRTEEVSLSFTPHDTYKLW 831
RLPPLSR+ +L+ WQ +L+ +D + +A+VCAPTSSGKTI+STY A+G +LFV+P+E LVWQVA+L+ + +G V +C +QI ++ E + VGTP+ALE +L K+RG GDE+ G+ ++ + GGF+ FDY V DEVH+L+ EGDALQR+I+A NC LALSATIGNA QLKDW+ VQ EQ + VI+AP PP +V L+EHS RFINLQRYV G T LHP +AM+ + L + SL+ TPHD LW
Sbjct: 332 RLPPLSRYNRKLQLEPWQFDILKAIDDRQTAVVCAPTSSGKTILSTYT--CKNANGPVLFVLPSEVLVWQVASLYYQFFKGN-VTVCTEQITFQEVTGEAQVYVGTPIALERSLCKVRGIAGDEMTKGEREFMILDGGFNQFDYLVLDEVHTLNGPEGDALQRIIKACNCPMLALSATIGNAVQLKDWFASVQKEQM-EATVIDAPE---------TPP--DVVLKEHSSRFINLQRYVVTEKEGKDGKTEAKLTKLHPVAAMTSDRLTNQPELISSLAMTPHDMMTLW 605
BLAST of mRNA_E-fasciculatus_F_contig12110.1647.1 vs. uniprot
Match: A0A4D9CYE4_9STRA (Helicase ATP-binding domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYE4_9STRA) HSP 1 Score: 231 bits (590), Expect = 1.520e-65 Identity = 136/266 (51.13%), Postives = 176/266 (66.17%), Query Frame = 1
Query: 1 RLPPLSRFTTGWKLDEWQKRVLRQVDKKNSAIVCAPTSSGKTIISTYVTVAAGASGKILFVVPTEPLVWQVAALFNKLLRGQQVAICMDQIYYRPDIE----LRTIVGTPMALETALTKLRGPVGDEVVGKLDYTQMKGGF-DFDYAVYDEVHSLDSEEGDALQRLIRAVNCNFLALSATIGNAQQLKDWWTEVQ----GEQARDLEVIEAPAGAGEGRRGFVPPSGEVYLEEHSGRFINLQRYVWMGSTFVNLHPCSAMSVELLQ 771
RLPPLSRFT G LD WQKRVL +D++ S IVCAPTSSGKTI+S+YVT+ A KILFVVPTEPLVWQVAA+F K+L G+ VA+ +QI Y P E R IVGTP+ALE+AL+K RG G E++G+ D++ +GGF +F+Y +YDEVH+LD EEG ALQR+I+AV CNFLALSATIGN L+DWW V G++ ++E + A GR GE Y E R + ++ +++L P V+ L+
Sbjct: 393 RLPPLSRFTFGRSLDAWQKRVLGLIDERRSVIVCAPTSSGKTILSSYVTMRAD---KILFVVPTEPLVWQVAAMFYKVLGGE-VAVVTNQIVYNPKREDPRDWRVIVGTPLALESALSKPRGREGAEMLGQQDFSTFRGGFHEFEYVIYDEVHTLDGEEGAALQRIIKAVRCNFLALSATIGNGPALRDWWQGVHEDHVGQERAEVEAMLA------GRGDQTREEGEDY--EMLARLVRMR--------YIHLSPAQGPDVKALK 638
BLAST of mRNA_E-fasciculatus_F_contig12110.1647.1 vs. uniprot
Match: A0A7S3P4A9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4A9_9STRA) HSP 1 Score: 231 bits (588), Expect = 2.460e-65 Identity = 133/289 (46.02%), Postives = 187/289 (64.71%), Query Frame = 1
Query: 1 RLPPLSRFTTGWKLDEWQKRVLRQVDKKNSAIVCAPTSSGKTIISTYVTVAAGASGKILFVVPTEPLVWQVAALFNKLLRGQQVAICMDQIYYRPDI-ELRTIVGTPMALETALTKLRGPVGDEVV-GKLDYTQMKGGFD-FDYAVYDEVHSLDSEEGDALQRLIRAVNCNFLALSATIGNAQQLKDWWTEVQGEQARDLEVIEAPAGAGEGRRGFVPPSGEVYLEEHSGRFINLQRYVWM------GST---FVNLHPCSAMSVELLQSGRTEEVSLSFTPHDTYKLW 831
RLPPLSR+ +KL++WQ ++L +DK+ SA+VCAPTSSGKT++STY A G +LFV+P+E LVWQVA+ + + +G V +C DQI ++ + + +GTP ALE +++K+RG G+E+ G+ ++ + GG+ FDY V DEVH+L+ EGDALQR+I+ NC LALSATIGNA QL+DW++ V+ EQ + V++AP P +G+V L+E+S RFINLQRYV G T V LHP +AM+ + L+ SLS TP D LW
Sbjct: 340 RLPPLSRYNRQFKLEDWQCKILGAIDKRQSAVVCAPTSSGKTLLSTYT--CKNAKGTVLFVLPSEVLVWQVASTYYQFFKGN-VTVCTDQITFQEVTGDAQVYIGTPKALERSISKVRGIAGEEMQKGEREFMILDGGYSQFDYLVLDEVHTLNGPEGDALQRIIKCCNCPVLALSATIGNATQLRDWFSSVRTEQI-EATVVDAP-----------PDAGDVLLQEYSARFINLQRYVVNEVEAKDGKTKKKLVKLHPIAAMTPKRLKEEPELIESLSMTPSDLMDLW 613
BLAST of mRNA_E-fasciculatus_F_contig12110.1647.1 vs. uniprot
Match: A0A7S3Q8K1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q8K1_9STRA) HSP 1 Score: 230 bits (586), Expect = 3.810e-65 Identity = 136/289 (47.06%), Postives = 180/289 (62.28%), Query Frame = 1
Query: 1 RLPPLSRFTTGWKLDEWQKRVLRQVDKKNSAIVCAPTSSGKTIISTYVTVAAGASGKILFVVPTEPLVWQVAALFNKLLRGQQVAICMDQIYYRP-DIELRTIVGTPMALETALTKLRGPVGDEVV-GKLDYTQMKGGF-DFDYAVYDEVHSLDSEEGDALQRLIRAVNCNFLALSATIGNAQQLKDWWTEVQGEQARDLEVIEAPAGAGEGRRGFVPPSGEVYLEEHSGRFINLQRYVWMGST---------FVNLHPCSAMSVELLQSGRTEEVSLSFTPHDTYKLW 831
RLPPLSR+ +KL+EWQ +L +D + SA+VCAPTSSGKT++STY A G +LFV+P+E LVWQ+AA + + RG V IC DQI ++ + + +GTP ALE A+TK RG G E+ G+ ++T + GGF FDY V DEVH+++ EGDALQR+I+A NC FLALSATIGNA QLK W+ +V D ++++APA P G V L+EH RFINLQRY S V LHP +AM+ E L++ + LS TP D +W
Sbjct: 247 RLPPLSRYNRTFKLEEWQCDILEAIDNRQSAVVCAPTSSGKTLLSTYTCKIA--QGTVLFVLPSEALVWQIAATYYEFFRGN-VTICTDQISFQEISGDTQVYIGTPRALEKAITKARGCAGQEMAKGEKEFTILDGGFHQFDYLVLDEVHTMNGPEGDALQRIIKACNCPFLALSATIGNAVQLKSWFEKVLNSHV-DAQLVDAPA----------KPEG-VILKEHFARFINLQRYFVEESEGKDGKKKCKLVKLHPIAAMTPERLENEPDLVLGLSMTPVDMMDIW 520
BLAST of mRNA_E-fasciculatus_F_contig12110.1647.1 vs. uniprot
Match: A0A7S2KIY8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KIY8_9STRA) HSP 1 Score: 227 bits (578), Expect = 5.410e-64 Identity = 137/289 (47.40%), Postives = 177/289 (61.25%), Query Frame = 1
Query: 1 RLPPLSRFTTGWKLDEWQKRVLRQVDKKNSAIVCAPTSSGKTIISTYVTVAAGASGKILFVVPTEPLVWQVAALFNKLLRGQQVAICMDQIYYRPDIE--LRTIVGTPMALETALTKLRGPVGDEVV-GKLDYTQMKGGFDFDYAVYDEVHSLDSEEGDALQRLIRAVNCNFLALSATIGNAQQLKDWWTEVQGEQARDLEVIEAPAGAGEGRRGFVPPSGEVYLEEHSGRFINLQRYVW---------MGSTFVNLHPCSAMSVELLQSGRTEEVSLSFTPHDTYKLW 831
RLPPLSR+ ++L++WQ VL +D ++SAIVCAPTSSGKT++STY A G +LFV+P+E LVWQVAA + + +G V IC DQI ++ +I + +GTP ALE ALTK R G E+ G+ ++ + GG++FDY V DEVH+L+ EGDALQR+I A NC LALSATIGNA QLK W+ V+ G EG++ S EV L EH RFINLQRYV + V LHP +AM+ E L + R SLS TP D +LW
Sbjct: 329 RLPPLSRYNRKFRLEDWQCAVLESIDNRSSAIVCAPTSSGKTLLSTYT--CKSAKGTVLFVLPSEVLVWQVAATYYEFFKGN-VTICTDQIQFQ-EISGGAQVYIGTPKALEKALTKSRACAGQEMTKGEREFMILDGGYNFDYLVLDEVHTLNGPEGDALQRIIHATNCPILALSATIGNATQLKGWFET----------VVNRHFGLIEGQK-----SEEVLLREHFARFINLQRYVVTKEEGKDGKVKQKLVKLHPVAAMTPERLLNERDLVASLSMTPSDMMELW 598
BLAST of mRNA_E-fasciculatus_F_contig12110.1647.1 vs. uniprot
Match: A0A7S2YA93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YA93_9STRA) HSP 1 Score: 225 bits (574), Expect = 8.640e-64 Identity = 129/289 (44.64%), Postives = 181/289 (62.63%), Query Frame = 1
Query: 1 RLPPLSRFTTGWKLDEWQKRVLRQVDKKNSAIVCAPTSSGKTIISTYVTVAAGASGKILFVVPTEPLVWQVAALFNKLLRGQQVAICMDQIYYRPDI-ELRTIVGTPMALETALTKLRGPVGDEVV-GKLDYTQMKGGFD-FDYAVYDEVHSLDSEEGDALQRLIRAVNCNFLALSATIGNAQQLKDWWTEVQGEQARDLEVIEAPAGAGEGRRGFVPPSGEVYLEEHSGRFINLQRYVWMGST---------FVNLHPCSAMSVELLQSGRTEEVSLSFTPHDTYKLW 831
RLPPLSR+ +KL++WQ +L +D++ SA+VCAPTSSGKT++STY A G +LFV+P+E LVWQVA+ + + +G V +C DQI ++ + + +GTP ALE A+ K+RG G+E+ G+ ++ + GG+ FDY V DEVH+L+ EGDALQR+I++ NC LALSATIGNA QL+DW++ V+ E + +++AP+ P +V L+E+ RFINLQRYV S V LHP +AM+ E L SLS TP D LW
Sbjct: 337 RLPPLSRYNRKFKLEDWQCSILGAIDERRSAVVCAPTSSGKTLLSTYT--CKNAHGTVLFVLPSEVLVWQVASTYYQFFKGN-VTVCTDQISFQEVTGDAQVYIGTPKALERAIAKVRGAAGEEMTKGEREFMILDGGYSQFDYLVLDEVHTLNGPEGDALQRIIKSCNCPVLALSATIGNASQLRDWFSHVRNEHL-EATLVDAPS----------EPPEDVILQEYFARFINLQRYVVTESEGKDGKTKQKLVKLHPVAAMTPERLNDEPELIASLSMTPADMMDLW 611 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12110.1647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12110.1647.1 >prot_E-fasciculatus_F_contig12110.1647.1 ID=prot_E-fasciculatus_F_contig12110.1647.1|Name=mRNA_E-fasciculatus_F_contig12110.1647.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=278bp RLPPLSRFTTGWKLDEWQKRVLRQVDKKNSAIVCAPTSSGKTIISTYVTVback to top mRNA from alignment at E-fasciculatus_F_contig12110:756..4118- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12110.1647.1 ID=mRNA_E-fasciculatus_F_contig12110.1647.1|Name=mRNA_E-fasciculatus_F_contig12110.1647.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3363bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12110:756..4118- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12110:756..4118- >mRNA_E-fasciculatus_F_contig12110.1647.1 ID=mRNA_E-fasciculatus_F_contig12110.1647.1|Name=mRNA_E-fasciculatus_F_contig12110.1647.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1668bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12110:756..4118- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |