mRNA_E-fasciculatus_F_contig1211.1643.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1211.1643.1 vs. uniprot
Match: D7G8K2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K2_ECTSI) HSP 1 Score: 465 bits (1197), Expect = 6.480e-158 Identity = 308/424 (72.64%), Postives = 316/424 (74.53%), Query Frame = 3
Query: 180 MSRLKTMLQQKLVQKYGSKRSVNSKLNLEIEEEVSAFTARTSRQPTDDEFLELENAVRELRAKYVKRGGSXXXXXXXXXXXXXXISNSPRGSAASXXXXCTRGSSGMDNENRAGGSAGGVDDVGGDLLPPSIARAWRTFDVAKQIEYETKEQQKSEKAKLQKIM--QELEVHRAKQAEKKAXXXXXXXXXMEEQERKLAEFHMEQEAIKKRASDKXXXXXXXXXXQVQRLQAEKEIERQARLDKEMLDIERCKAQLQGEVDEADRKRKSEKDRLAAIQAENAKQREIRAQRQRESDAADALLLKEHRQRMDAEEQARAAKLQQRMKRYEDIGNFWSERQAGNTEAEVELREAQQTLKAARRQENKQKNAQRRGKEEATLERERKEREARRIAGMVMAAENQKVIQEKNALNAKKHKEDMEFAQR 1445
MSRLKTMLQQKLVQKYGSKR+VNS+LNLEIEEE DNEN GGSAGGVDDVG LLPPSIARAWRTFDVAKQIEYETKEQQKSEKAK QKI+ +ELEVHRAKQAEKKA XXXXXXX ERKLAEFHMEQEAIKKRASDK XX QV+RLQAEKEIERQARLD+EMLDIERCKA+LQGEVDEADRKRKSEKDRLAAIQAENAKQREIR QRQRESDAADALLLKEHRQRMDAEEQARAAKL+QRMKRYEDIGNFWSERQAGNTEAEVELREAQQTLKAARR KEEATLERERKEREARRIAGMVMAAENQKVIQEKNALNAKKHKEDMEFAQR
Sbjct: 1 MSRLKTMLQQKLVQKYGSKRNVNSRLNLEIEEE--------------------------------------------------------------------------DNENSPGGSAGGVDDVGDGLLPPSIARAWRTFDVAKQIEYETKEQQKSEKAKQQKIIFREELEVHRAKQAEKKAVEXXXXXXXXXXXERKLAEFHMEQEAIKKRASDKHAEEKALXXQQVKRLQAEKEIERQARLDEEMLDIERCKAKLQGEVDEADRKRKSEKDRLAAIQAENAKQREIREQRQRESDAADALLLKEHRQRMDAEEQARAAKLKQRMKRYEDIGNFWSERQAGNTEAEVELREAQQTLKAARR------------KEEATLERERKEREARRIAGMVMAAENQKVIQEKNALNAKKHKEDMEFAQR 338
BLAST of mRNA_E-fasciculatus_F_contig1211.1643.1 vs. uniprot
Match: A0A7S1TW05_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TW05_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.390e-20 Identity = 84/266 (31.58%), Postives = 148/266 (55.64%), Query Frame = 3
Query: 885 RQARLDK----EMLDIERCKAQLQGEVDEADRKRKSEKDRLAAIQAENAKQREIRAQRQRESDAADALLLKEHRQRMDAEEQARAAKLQQRMKRYEDIGNFWSERQAGNTEAEVELREAQQTLKAARRQENKQKNAQRRGKEEATLERERKEREARRIAGMVMAAENQKVIQEKNALNAKKHKEDMEFAQRFINDSEAYRQEERDKITKKRIAMAKYRKDLEIQVQETRARRVHLDMSDTEYRMNSDLVKKLEADKKLVAQVRQRM 1670
R+A DK EM +I RCK +Q DE RKR+ E +RL I EN + RA+ +E A D L++E++ +++ E+ R ++RM+RYE G W+++ AG + E ELR + L+ A++ KE+A +ERER+++E R + +AA N+ +++EK ++H M +A F + E Y ER + +R K+ L+ Q++ R RR ++MSD E +N ++++K++ D ++V++++ R+
Sbjct: 338 RKAEFDKRRAEEMEEIRRCKDAIQFTRDEEARKRREEHERLKKILIENQIENAKRAEVAKEEAAEDVRLMEEYKAKLEREDLERKRAFEKRMERYEAYGRLWADKGAGKKQREEELRIERVILREAKK------------KEDADIERERRDKEYLRTTALSIAASNKNLMEEKRRRMKEEHDASMIYAMSFRGEGEQYVAAERARAAARREEAKKHAAFLKEQIEGDRQRRQAVEMSDAERSVNREVLRKVKEDPEMVSRIQARL 591
BLAST of mRNA_E-fasciculatus_F_contig1211.1643.1 vs. uniprot
Match: A0A7S2C158_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C158_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.350e-19 Identity = 145/544 (26.65%), Postives = 250/544 (45.96%), Query Frame = 3
Query: 66 VQGQRATTNEPVAHMQAMSSARREKLRLLQEREAVKARMSRLKTMLQQKLVQKYGSKRSVNSKLNLEIEEEVSAFTARTSRQPTDDEFLELENAVRELRAKYVKRGGSXXXXXXXXXXXXXXISNSPRGSAASXXXXCTRGSSGMDNENRAGGSAGGVDDVGGDLLPPSIARAWRTFDVAKQIEYETKEQQKSEKAKLQKIMQELEVHRAKQAE----KKAXXXXXXXXXMEEQERKLAEFHMEQEAIKKRASDKXXXXXXXXXXQVQRLQAEKEIERQARLDKEMLDIERCKAQLQGEVDEADRKRKSEKDRLAAIQAENAKQREIRAQRQRESDAADALLLKEHRQRMDAEEQARAAKLQQRMKRYEDIGNFWSERQAGNTEAEVELREAQQTLKAARRQENKQKNAQRRGKEEATLERERKEREARRIAGMVMAAENQKVIQEKNALNAKKHKEDMEFAQRFINDSEAYRQEERDKITKKRIAMAKYRKDLEIQVQETRARRVHLD---MSDTEYRMNSDLVKKLEADKKLVAQVRQRMES 1676
VQ N AMS +RR K+ L+ERE ++ +RL++ML QKL+ KYG ++ S+ N I++ V+AF +T TD ++LE V+++ A S S P G+ GM + RA +AG D W D IE E Q +KAK + +E + KQ + K + + +Q L E+ Q+ ++ K Q+ Q K+ E AR E+ +++ + ++Q + A K+ EK+RL I+ EN K+R +R +R E A D L++E++++++ EE RA ++R+ + E G+ W+E AG + +VE R L+ A + K+ A ERER+++ A + +MA N+ +++ K + E+M++AQ+F E Y++EE ++ KR AM ++ L Q+ AR+ +D MS +E ++N+ L+ KL D + ++ Q++ +
Sbjct: 27 VQEDERKMNMNTIKATAMSDSRRRKIEGLRERERLREYRTRLQSMLNQKLLTKYGDIKTRGSRKNDAIKKTVAAFMKQTG-PITDQHLVQLEQQVKQVVADLANPQTSARPASSG--------SGMPSGN-------------GMVGKLRAQ-TAGVKKDY----------NEWTILDAYNAIEAEEGAQATYKKAKSK--QREFKTLLDKQVQECSGKGSNEKDEEKQYVAKQNYLLEEWKTGQQKVQMTIRGKLEEEKRAREGQISERQQRKKTELAARRAAEIQELDIVRQEIQRQEQMAIDKKIKEKERLKGIRLENEKERLVRKKRAEEEAAEDQRLMEEYKRKLEQEEVDRANAFKRRLDKLEATGSKWAEEGAGKEQMDVEKRLEAMVLREAAK------------KDAADEERERRDKAALKYNAKLMAETNKSLMESKVRAGTAQQAEEMKYAQQFRTAGEDYQREEINRKIAKRKAMQAHQAQLMEQI----ARKKAVDKFAMSGSERKVNAALLNKLTNDPVFMEKLDQKLRA 519
BLAST of mRNA_E-fasciculatus_F_contig1211.1643.1 vs. uniprot
Match: A0A836CRB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRB1_9STRA) HSP 1 Score: 102 bits (253), Expect = 7.780e-19 Identity = 143/538 (26.58%), Postives = 233/538 (43.31%), Query Frame = 3
Query: 90 NEPVAHMQA--MSSARREKLRLLQEREAVKARMSRLKTMLQQKLVQKYGSKRSVNSKLNLEIEEEVSAFTA---RTSRQPTDDEFLELENAVRELRAKYVKRGGSXXXXXXXXXXXXXXISNSPRGSAASXXXXCTRGSSGMDNENRAGGSAGGVDDVGGDLLPPSIARAWRTFDVAKQIEYETKEQQKSEKAKLQKIMQELEVHRAKQAEKKAXXXXXXXXXMEEQERKLAEFHMEQEAIKKRASDKXXXXXXXXXXQVQRLQAEKEIERQARLDKEMLDIERCKAQLQGEVDEADRKRKSEKDRLAAIQAENAKQREIRAQRQRESDAADALLLKEHRQRMDAEEQARAAKLQQRMKRYEDIGNFWSERQAGNTE---AEVELREAQQTLKAARRQENKQKNAQRRGKEEATLERERKEREARRIAGMVMAAENQKVIQEKNALNAKKHKEDMEFAQRFINDSEAYRQEERDKITKKRIAMAKYRKDLEIQVQETRARRVHLDMSDTEYRMNSDLVKKLEADKKLVAQVRQRMESA 1679
NEP+ + A+R+KL LQ+RE +K + +R L + LV +YG++ E V A A + QP+ + ELE V+ + Y GGS + GGSAG D +AR WR FD+AKQIE+E + +K +A L+ QA + M EQ+A +R ++ ++ A +I+ + + AD +R E+ LA + + A + DA L++E+R R+D EE RA KL++RM++YE IG +W + +GN AE++ EA + A R A ERER++ E RRI M A +N++ +QE+N + ++ + + + A+ D+EA++Q E+++I KKR+AM KYR +L+ M++TE +NSD+VK+++AD +L +VR+R+ +A
Sbjct: 334 NEPMRDLPPGLQQPAQRKKLEALQKREMIKEKAARQSATLVKTLVAQYGTRH----------EHAVEAAVADLFKRQLQPSAADLAELEAHVKGM---YGHMGGSAG--------------------------------------DARGGSAGASAD--------DLARDWRAFDMAKQIEFEDTQARKKMRAALE------------QARLRHQLSGQVRDHMSR----------EQQAALERQAELDAQAERRRQWDAEQAAARAKIQERHXXXXXXXXXXXXXXXXXXXAERADAER-HERVALAKVAEQAADE--------------DARLMEEYRLRLDREEAERARKLKERMQKYEKIGAYWQD--SGNVREQAAELDRLEANIQEEFAARA-------------HAESERERRDWEKRRIGCMAAALDNRRTVQERNRRSEEEAERERQLAETARADAEAFKQAEKERIEKKRLAMTKYRAELDKXXXXXXXXXXXXXMTETEALLNSDIVKRIQADARLQQRVRERLGAA 760
BLAST of mRNA_E-fasciculatus_F_contig1211.1643.1 vs. uniprot
Match: A0A7S1TWB0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWB0_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 4.720e-17 Identity = 69/233 (29.61%), Postives = 130/233 (55.79%), Query Frame = 3
Query: 972 RKSEKDRLAAIQAENAKQREIRAQRQRESDAADALLLKEHRQRMDAEEQARAAKLQQRMKRYEDIGNFWSERQAGNTEAEVELREAQQTLKAARRQENKQKNAQRRGKEEATLERERKEREARRIAGMVMAAENQKVIQEKNALNAKKHKEDMEFAQRFINDSEAYRQEERDKITKKRIAMAKYRKDLEIQVQETRARRVHLDMSDTEYRMNSDLVKKLEADKKLVAQVRQRM 1670
R E++RL I EN + RA+ +E A D L++E++ +++ E+ R ++RM+RYE G W+++ AG + E ELR + L+ A++ KE+A +ERER+++E R + +AA N+ +++EK ++H M +A F + E Y ER + +R K+ L+ Q++ R RR ++MSD E +N ++++K++ D ++V++++ R+
Sbjct: 16 RGGERERLKKILIENQIENAKRAEVAKEEAAEDVRLMEEYKAKLEREDLERKRAFEKRMERYEAYGRLWADKGAGKKQREEELRIERVILREAKK------------KEDADIERERRDKEYLRTTALSIAASNKNLMEEKRRRMKEEHDASMIYAMSFRGEGEQYVAAERARAAARREEAKKHAAFLKEQIEGDRQRRQAVEMSDAERSVNREVLRKVKEDPEMVSRIQARL 236
BLAST of mRNA_E-fasciculatus_F_contig1211.1643.1 vs. uniprot
Match: A0A7S2WFB5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFB5_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 4.760e-16 Identity = 150/533 (28.14%), Postives = 248/533 (46.53%), Query Frame = 3
Query: 117 MSSARREKLRLLQEREAVKARMSRLKTMLQQKLVQKYGS----KRSVNSKLNLEIEEEVSAFTARTSRQPTDDEFLELENAVRELRAKYVKRGGSXXXXXXXXXXXXXXISNSPRGSAASXXXXCTRGSSGMDNENRAGGSAGGVDDVGGDLLPPSIARAWRTFDVAKQIEYETKEQQK--SEKAKLQKIMQELE--VHRAKQAEKKAXXXXXXXXXMEEQERKLAEFHMEQEAIKKRASDKXXXXXXXXXXQVQRLQAEKEIERQARLDKEMLDIERCKAQLQGEVDEADRKRKSEKDRLAAIQAENAKQREIRAQRQRESDAADALLLKEHRQRMDAEEQARAAKLQQRMKRYEDIGNFWSERQAGNTEAEVELREAQQTLKAARRQENKQKNAQRRGKEEATLERERKEREARRIAGMVMAAENQKVIQEKNALNAKKHKEDMEFAQRFINDSEAYRQEERDKITKKRIAMAKYRKDLEIQVQETRARR---VHLDMSDTEYRMNSDLVKKLEADKKLVAQVRQRMESAN 1682
MS RR+K+ L+ERE ++ SRL++ML QKL+ KYG ++ SK N I++ V F RTS +D +LE V++ A R G ++S R SAA RG +E GG+ VD D L + W +Q++ E QQK + K + K ++L+ VH K K E +++ E+ QE XXXXXXXXXX RC+ ++ E + + +E +R+ ++ +N K+R+IR QR+++ D L++ ++ +++ EE RA ++RM+R + G W+E AG + E E + QQ L A R KE+A LERER++++A + +MA N+K+I+ K +K +ED FA++ D + + + E K +K + M +++ L Q+ + MSD E ++N +L+KKL + +L+ +V R+ +A+
Sbjct: 2 MSEPRRKKIESLREREQLREYRSRLQSMLLQKLMSKYGDVGRRQQGPTSKKNTAIKQVVRDFM-RTSTSFDEDSLKDLEAQVQQ--AVSALRTGPLDPLGNTSSKGGAQRTHS-RASAA-------RGGLPSTSETSRGGAQ--VDPALVDSLMQGV-NEWTLLQACEQVKNEADAQQKLKASKDRQLKFKRDLDTQVHLVKAG--KVHDKDDEIAYFAEVQKRKEEWKKSQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCQEEIIAEQRKVQAAKDAEAERMRQVKLDNLKERQIRMQRKQQEALEDQRLMEAYKAKLEREEVERANAFERRMERLQASGQKWAEEGAGKEQLEFEQKLEQQILGEALR------------KEQADLERERRDKQAIKDKQRLMAESNRKLIEAKKLRMQRKQQEDQSFAEKSQRDQKEFFESEARKKKEKALLMNQHQIALSQQIHHRSNNPTDPMKASMSDHERKINGELLKKLHQEPELLLKVANRVHAAS 506
BLAST of mRNA_E-fasciculatus_F_contig1211.1643.1 vs. uniprot
Match: D8LLG7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLG7_ECTSI) HSP 1 Score: 73.6 bits (179), Expect = 2.760e-10 Identity = 62/205 (30.24%), Postives = 115/205 (56.10%), Query Frame = 3
Query: 1068 DALLLKEHRQRMDAEEQARAAKLQQRMKRYEDIGNFWSERQAGNTEAEVELREAQQTLKAARRQENKQKNAQRRGKEEATLERERKEREARRIAGMVMAAENQKVIQEKNALNAKKHKEDMEFAQRFINDSEAY----RQEERDKITKKRIAMAKYRKDLEIQVQETRARRVHLDMSDTEYRMNSDLVKKLEADKKLVAQVRQRM 1670
D L+KE+R+R+D E+ R A +R++RYE IGN W+E AG + + ++ E ++ L A KE+ +RE +++EA R+ + +N++++ +K A K + E+AQ+F E + + +R+ + +K+ Y + LE Q++ETRA + M+DTE +MN +L++KL+ D+ L ++ +R+
Sbjct: 187 DKRLMKEYRERLDREQAERTAAHNKRLQRYEMIGNQWAESGAGKRQHDKDIAEERRILAEAAI------------KEKIDEDREIRDKEALRVDRLRCLEDNKRLMGDKAARKKADEKLEAEYAQQFRVQGEMHVAKGLERKREMVREKKA----YARMLEDQIRETRAALRTVQMTDTERKMNGELLRKLQGDRDLQERISRRL 375 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1211.1643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1211.1643.1 >prot_E-fasciculatus_F_contig1211.1643.1 ID=prot_E-fasciculatus_F_contig1211.1643.1|Name=mRNA_E-fasciculatus_F_contig1211.1643.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=526bp MQAMSSARREKLRLLQEREAVKARMSRLKTMLQQKLVQKYGSKRSVNSKLback to top mRNA from alignment at E-fasciculatus_F_contig1211:2..9744- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1211.1643.1 ID=mRNA_E-fasciculatus_F_contig1211.1643.1|Name=mRNA_E-fasciculatus_F_contig1211.1643.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9743bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1211:2..9744- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1211:2..9744- >mRNA_E-fasciculatus_F_contig1211.1643.1 ID=mRNA_E-fasciculatus_F_contig1211.1643.1|Name=mRNA_E-fasciculatus_F_contig1211.1643.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3156bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1211:2..9744- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |