prot_E-fasciculatus_F_contig12101.1640.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12101.1640.1
Unique Nameprot_E-fasciculatus_F_contig12101.1640.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length120
Homology
BLAST of mRNA_E-fasciculatus_F_contig12101.1640.1 vs. uniprot
Match: D8LPV2_ECTSI (Nucleotidyltransferase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV2_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 1.580e-59
Identity = 95/115 (82.61%), Postives = 105/115 (91.30%), Query Frame = 0
Query:    1 TPATCSRNLRPPWYRESSVEQGFPLRTLHNEILDLCDLLMPTPKEKANTAIAITYVRQAVEEALGSEAKVKIFGSQLTGLVLPSSDIDTVVMGGPRGSIDKLGPAMYRRQNKGEV 115
            T +   RNLRPPWYRESSVEQGFPLRTLHNEILDLCDLLMPTP+EKA TAIAITY+++ VEE LGSEA+V+IFGSQLTGLVLPSSDID+VV+GGPRGS+  LG AMYRRQNKGEV
Sbjct:  238 TDSNSRRNLRPPWYRESSVEQGFPLRTLHNEILDLCDLLMPTPEEKAKTAIAITYIKRVVEETLGSEARVEIFGSQLTGLVLPSSDIDSVVLGGPRGSLGSLGAAMYRRQNKGEV 352          
BLAST of mRNA_E-fasciculatus_F_contig12101.1640.1 vs. uniprot
Match: A0A6H5K966_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K966_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 1.690e-56
Identity = 93/115 (80.87%), Postives = 104/115 (90.43%), Query Frame = 0
Query:    1 TPATCSRNLRPPWYRESSVEQGFPLRTLHNEILDLCDLLMPTPKEKANTAIAITYVRQAVEEALGSEAKVKIFGSQLTGLVLPSSDIDTVVMGGPRGSIDKLGPAMYRRQNKGEV 115
            T +   RN+RPPWYRESSVEQGFPLRTLHNEILDLCDLLMPTP+EKA TAIAITY+++ V+E LGSEAKV+IFGSQLTGLVLPSSDID+VV+GGPR +I  LG AMYRRQNKGEV
Sbjct:  159 TDSKSRRNIRPPWYRESSVEQGFPLRTLHNEILDLCDLLMPTPEEKAKTAIAITYIKRVVKENLGSEAKVEIFGSQLTGLVLPSSDIDSVVLGGPRSAIGSLGAAMYRRQNKGEV 273          
BLAST of mRNA_E-fasciculatus_F_contig12101.1640.1 vs. uniprot
Match: A0A835YW64_9STRA (PAP-associated domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW64_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.010e-20
Identity = 47/105 (44.76%), Postives = 62/105 (59.05%), Query Frame = 0
Query:   11 PPWYRESSVEQGFPLRTLHNEILDLCDLLMPTPKEKANTAIAITYVRQAVEEALGSEAKVKIFGSQLTGLVLPSSDIDTVVMGGPRGSIDKLGPAMYRRQNKGEV 115
            PPW+R         L TLHNEILD CDL+ PT  E  +   A+ +V Q  E+ LG+   V +FGS LT L++PSSD+D V+M  P  +I  L   + RR N GE+
Sbjct:   37 PPWFRHEHWCPENVLVTLHNEILDFCDLVKPTKAEHEDAERALNFVTQVAEQVLGNGVAVHVFGSHLTKLLVPSSDLDLVIMNAPSNAIHLLSRDLRRRSNTGEI 141          
BLAST of mRNA_E-fasciculatus_F_contig12101.1640.1 vs. uniprot
Match: A0A161YKG9_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A161YKG9_DAUCS)

HSP 1 Score: 73.6 bits (179), Expect = 8.130e-13
Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 0
Query:    7 RNLRPPWYRESSVEQGFPLRTLHNEILDLCDLLMPTPKEKANTAIAITYVRQAVEEALGSEAKVKIFGSQLTGLVLPSSDIDTVVMG 93
            R L   W+R SS  +  P+  LH EILD C+ L PTP+E+A+ + A+  V   V+    S  +V++FGS  TGL LPSSDID V+MG
Sbjct:   85 RTLEGNWFRSSSRFKS-PMLQLHQEILDFCEFLSPTPEEEASRSAAVKSVFDVVKYIWPS-CEVEVFGSFKTGLYLPSSDIDVVIMG 169          
BLAST of mRNA_E-fasciculatus_F_contig12101.1640.1 vs. uniprot
Match: A0A7S2XW69_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW69_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.100e-12
Identity = 43/100 (43.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query:    6 SRNLRPPWYRESSVEQGFPLRTLHNEILDLCDLLMPTPKEKANTAIAITYVRQAVEEALG---SEAKVKIFGSQLTGLVLPSSDIDTVVMG-GPRGSIDK 101
            S N   PW RE +     PL +LHNEIL LCDLL+PT  EK      + ++ + + E +     E  V +FGS+LT L LP+SD+D VV+G G R ++ K
Sbjct:   40 SENEVVPWMREQTSMDS-PLISLHNEILSLCDLLLPTAAEKEARQDVVEWITEFITEKVWPKEEEVCVSVFGSELTKLALPASDVDLVVLGLGARETMGK 138          
BLAST of mRNA_E-fasciculatus_F_contig12101.1640.1 vs. uniprot
Match: A0A6J0PK18_ELAGV (inactive non-canonical poly(A) RNA polymerase protein Trf4-2 isoform X1 n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6J0PK18_ELAGV)

HSP 1 Score: 72.4 bits (176), Expect = 2.060e-12
Identity = 37/87 (42.53%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    6 SRNLRPPWYRESSVEQGFPLRTLHNEILDLCDLLMPTPKEKANTAIAITYVRQAVEEALGSEAKVKIFGSQLTGLVLPSSDIDTVVM 92
            +R L   W+R  S  +  P+  LH EILD CD + PTP+E+A+ A A+  V + ++  +   +KV++FGS  TGL LP+SDID V++
Sbjct:   81 NRALEQAWFRAGSRFKS-PMLQLHKEILDFCDFVSPTPEERASRAAAVQCVFEIIKH-IWPHSKVEVFGSFRTGLYLPTSDIDVVIL 165          
BLAST of mRNA_E-fasciculatus_F_contig12101.1640.1 vs. uniprot
Match: A0A7S2H591_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H591_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 3.570e-12
Identity = 37/86 (43.02%), Postives = 56/86 (65.12%), Query Frame = 0
Query:    8 NLRPPWYRESSVEQGFPLRTLHNEILDLCDLLMPTPKEKANTAIAITYVRQAVEEALGSEAKVKIFGSQLTGLVLPSSDIDTVVMG 93
            +L+PPW++        PL  LHNEIL  CDL+ PT  E+ + A  ++ +R  V++ +  EA++ ++GS LTGL LPSSD+D  V+G
Sbjct:   45 SLQPPWHKPRKPGAS-PLTVLHNEILRFCDLISPTQAEEDSRAEVVSDIRALVKK-VWPEAELFVYGSTLTGLCLPSSDLDFAVLG 128          
BLAST of mRNA_E-fasciculatus_F_contig12101.1640.1 vs. uniprot
Match: A0A6I9TES8_SESIN (non-canonical poly(A) RNA polymerase PAPD5 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9TES8_SESIN)

HSP 1 Score: 71.2 bits (173), Expect = 5.220e-12
Identity = 45/113 (39.82%), Postives = 64/113 (56.64%), Query Frame = 0
Query:    1 TPATCSRNLRPPWYRESSVEQGFPLRTLHNEILDLCDLLMPTPKEKANTAIAITYVRQAVEEALGSEAKVKIFGSQLTGLVLPSSDIDTVVMGG----PRGSIDKLGPAMYRR 109
            TPA   R L   W+R +   +  P+  LH EILD CD L PTP+E+ +   AI  V   ++  +   A+V++FGS  TGL LPSSDID V++G     P+  +  L  A+ +R
Sbjct:   84 TPAA-ERTLEGHWFRANCRFKS-PMLQLHKEILDFCDFLSPTPEEQESRNAAIESVFNVIKY-IWPNAEVEVFGSFKTGLYLPSSDIDVVILGSNVRSPQIGLQALSRALSQR 193          
BLAST of mRNA_E-fasciculatus_F_contig12101.1640.1 vs. uniprot
Match: A0A2R6QBT4_ACTCC (Non-canonical poly(A) RNA polymerase n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QBT4_ACTCC)

HSP 1 Score: 71.2 bits (173), Expect = 5.260e-12
Identity = 44/107 (41.12%), Postives = 60/107 (56.07%), Query Frame = 0
Query:    7 RNLRPPWYRESSVEQGFPLRTLHNEILDLCDLLMPTPKEKANTAIAITYVRQAVEEALGSEAKVKIFGSQLTGLVLPSSDIDTVVMGG----PRGSIDKLGPAMYRR 109
            R L   W+R +   +  PL  LH EILD CD L PTP+EKA+   A+  V   V   +    KV++FGS  TGL LP+SDID V++G     P+  +  L  A+ +R
Sbjct:   87 RTLEGGWFRANCRFKS-PLLQLHKEILDFCDFLSPTPEEKASRNAAVESVFGVVRY-IWPNCKVEVFGSFKTGLYLPTSDIDVVILGSDIKTPQIGLQALTRALSQR 191          
BLAST of mRNA_E-fasciculatus_F_contig12101.1640.1 vs. uniprot
Match: A0A7J7C2H3_TRIWF (Non-canonical poly(A) RNA polymerase PAPD5 isoform X1 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C2H3_TRIWF)

HSP 1 Score: 71.2 bits (173), Expect = 5.270e-12
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 0
Query:    2 PATCSRNLRP----PWYRESSVEQGFPLRTLHNEILDLCDLLMPTPKEKANTAIAITYVRQAVEEALGSEAKVKIFGSQLTGLVLPSSDIDTVVMGG----PRGSIDKLGPAMYRRQ 110
            P T  R + P     W+   +     P+  LH EI+D CD L PTP+E+A+ ++A+  V   ++  +    +V++FGS  TGL LP+SDID V++G     P+  +  L  A+ +R+
Sbjct:   91 PVTPVRGIEPRLESSWWFGGNSRFKSPMLQLHKEIVDFCDFLSPTPEEQASRSMAVECVYDVIKY-IWPNCRVEVFGSFKTGLYLPTSDIDVVILGSGIRNPQPGLQALSRALSQRE 206          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12101.1640.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPV2_ECTSI1.580e-5982.61Nucleotidyltransferase family protein n=1 Tax=Ecto... [more]
A0A6H5K966_9PHAE1.690e-5680.87Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835YW64_9STRA2.010e-2044.76PAP-associated domain-containing protein n=1 Tax=T... [more]
A0A161YKG9_DAUCS8.130e-1347.13Uncharacterized protein n=1 Tax=Daucus carota subs... [more]
A0A7S2XW69_9STRA1.100e-1243.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6J0PK18_ELAGV2.060e-1242.53inactive non-canonical poly(A) RNA polymerase prot... [more]
A0A7S2H591_9STRA3.570e-1243.02Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A6I9TES8_SESIN5.220e-1239.82non-canonical poly(A) RNA polymerase PAPD5 n=1 Tax... [more]
A0A2R6QBT4_ACTCC5.260e-1241.12Non-canonical poly(A) RNA polymerase n=1 Tax=Actin... [more]
A0A7J7C2H3_TRIWF5.270e-1234.19Non-canonical poly(A) RNA polymerase PAPD5 isoform... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002934Polymerase, nucleotidyl transferase domainPFAMPF01909NTP_transf_2coord: 56..93
e-value: 4.5E-6
score: 26.9
NoneNo IPR availableGENE3D3.30.460.10coord: 41..112
e-value: 1.1E-9
score: 40.3
NoneNo IPR availablePANTHERPTHR23092:SF15INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATEDcoord: 10..93
NoneNo IPR availablePANTHERPTHR23092POLY(A) RNA POLYMERASEcoord: 10..93
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 27..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12101contigE-fasciculatus_F_contig12101:1602..4017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12101.1640.1mRNA_E-fasciculatus_F_contig12101.1640.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12101 1602..4017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12101.1640.1 ID=prot_E-fasciculatus_F_contig12101.1640.1|Name=mRNA_E-fasciculatus_F_contig12101.1640.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=120bp
TPATCSRNLRPPWYRESSVEQGFPLRTLHNEILDLCDLLMPTPKEKANTA
IAITYVRQAVEEALGSEAKVKIFGSQLTGLVLPSSDIDTVVMGGPRGSID
KLGPAMYRRQNKGEVGWTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002934Polymerase_NTP_transf_dom