mRNA_E-fasciculatus_F_contig121.1638.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig121.1638.1 vs. uniprot
Match: D7G505_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G505_ECTSI) HSP 1 Score: 1101 bits (2848), Expect = 0.000e+0 Identity = 576/791 (72.82%), Postives = 655/791 (82.81%), Query Frame = 1
Query: 1 QTACELKDVGGMITDGHYGSVVSILKRPLPSERISGGKFRLRLPHEDGRVKAQDIVNFQIGVVRGASSIGEVKMFLMLTCRRDSGDSPDGRTIARRSTLSDVSIYQRALSKTLLKLGKKDGFKAVFGGARHTTEQLNLASYKEMVHLPPDPATRQEYFEELDKELRRGFHLESRPDAQPFMVVLKSFNQKHMLWAPLTESGERVETADLANRVVDFASMAMGEVSTVLNTDRFGSEISVDLAVTMSPPEGLDDVLLVPRGDYYAGGGXAAGRSGGGYEGGRGTDLGFGVTKYSLFGSDQCASISGHAFDQATLPQVGRPSILDYASEPLTSAEAPLDGVISRTNLNVYSPTVLHATSSSKGHAMSVALRGSKVCNAVEVSRGVGVSGAFLSDARVKDVQAAVEKGREAALAIMSGLKGADGSLRTEVTYLLGSNGRT-GASQGFERMCADLLGEVFGVLDGGWNDRDATFALPSKAVGLLMHALCVRSLETMKFGFKALAELEDTVGVCDDVIPGQLPLGHLPAVAESVLRMDGLSLRIAGGVGPVLRAGQASCGFLALDEDASWIMEEGGAARLPIGLHLGQGGGRRGGGFGPRGRAFLVSRARDMPAKTRGLDLLLDGGEPLRKLLRLVFHCVMDEARVASERKKLLSTEARGGEEDAEGDSTSTWCPDPAVLLARNDVLAQDPEMVGRRFDVPDSRAKSTPVSTCLGRLLPILDGKSLGDMPVPHETVFNAMLQSFCAAPGFAILAPAPTRMWLLVLLEALVVDDFGMTILPRTRASRVFTTVGHFVR 2370
+T C+L + G +IT G YG+VVS+LKRPLPSERI+ GK+RL +P ED RVKAQ I NFQIG G+ S+GEVKMF+MLT RRD DSPDGRT+ARR+T+ DV +YQ ALS+TL+ L K++GF+AVF G HTT+QL LAS+KE+++LPP+ R +F++L++EL RGF LE RPDAQPFM+VLK+FNQKH LWAPLTE GE V LA+ +V FAS A EVSTV N DRFGSEISVDLAVTMS +G DDVLL PRGDYYA GG A+GRSG GYEGGRGTDLGF VTKYSLFGSDQCASISG A+ + +LP V R SILD AS LTSA+A L GVISRTNLNVYSPTVLHAT+SSKGHAM+VALRGS+V NAVE+ RGVGVSGAFLSDARV + AAV KGREAALAI+SG+KGA+GSLRTEVTYLL S+G GA+QGFERMCADLLGEVFGV GGWND DATFALP++ V LMHALCVRSLE++KFGF LA+L D CDDVIPGQLP+GHLP+V ESVLRMDGLSLRIAGGVG LRAGQASCGFLAL +DASWIM+EGGA RLPIGL + GGG R GGFGPR RAFLVS+ MPAKTRGLDLLL GGE L +LLR VFH VM+EARVAS +K LLS+ E DAE D STWCP PA LLARN+VLAQDP+M G+RF+VPDS AKS PVSTCLGRLLP LDGKSLG+MP PH TVFNA++Q+FCAAP FA+LAPA RMWLLVLLEALVV+D GM ILP+TRASR+FT VGHFVR
Sbjct: 55 RTGCDLTEAGEVITGGDYGAVVSLLKRPLPSERIASGKYRLLVPGEDARVKAQHITNFQIGFGHGSPSLGEVKMFIMLTYRRDPNDSPDGRTVARRATIPDVDVYQEALSRTLIALSKREGFRAVFVGPTHTTQQLRLASHKEVIYLPPEADARTSFFKKLNRELVRGFGLEFRPDAQPFMIVLKAFNQKHALWAPLTEPGEEVMQTVLADNMVAFASTAFTEVSTVFNADRFGSEISVDLAVTMSRAQGSDDVLLAPRGDYYAAGGGASGRSGVGYEGGRGTDLGFDVTKYSLFGSDQCASISGQAYGKPSLPAVARHSILDDASNALTSADAQLAGVISRTNLNVYSPTVLHATNSSKGHAMAVALRGSRVSNAVELLRGVGVSGAFLSDARVGEAHAAVAKGREAALAIISGMKGANGSLRTEVTYLLESDGADDGAAQGFERMCADLLGEVFGVQVGGWNDIDATFALPTEVVVCLMHALCVRSLESIKFGFNTLADLGDPR--CDDVIPGQLPIGHLPSVGESVLRMDGLSLRIAGGVGSALRAGQASCGFLALRDDASWIMKEGGATRLPIGLLIRGGGGLRSGGFGPRSRAFLVSQTHVMPAKTRGLDLLLHGGERLLELLRSVFHHVMEEARVASVKKNLLSSHDGDAEGDAEDDIASTWCPGPAALLARNEVLAQDPDMAGKRFEVPDSHAKSVPVSTCLGRLLPTLDGKSLGEMPAPHTTVFNAIVQAFCAAPAFALLAPAVARMWLLVLLEALVVEDIGMCILPKTRASRIFTIVGHFVR 843 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig121.1638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig121.1638.1 >prot_E-fasciculatus_F_contig121.1638.1 ID=prot_E-fasciculatus_F_contig121.1638.1|Name=mRNA_E-fasciculatus_F_contig121.1638.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1191bp MITDGHYGSVVSILKRPLPSERISGGKFRLRLPHEDGRVKAQDIVNFQIGback to top mRNA from alignment at E-fasciculatus_F_contig121:26181..38995- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig121.1638.1 ID=mRNA_E-fasciculatus_F_contig121.1638.1|Name=mRNA_E-fasciculatus_F_contig121.1638.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=12815bp|location=Sequence derived from alignment at E-fasciculatus_F_contig121:26181..38995- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig121:26181..38995- >mRNA_E-fasciculatus_F_contig121.1638.1 ID=mRNA_E-fasciculatus_F_contig121.1638.1|Name=mRNA_E-fasciculatus_F_contig121.1638.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=7146bp|location=Sequence derived from alignment at E-fasciculatus_F_contig121:26181..38995- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |