prot_E-fasciculatus_F_contig12097.1634.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12097.1634.1
Unique Nameprot_E-fasciculatus_F_contig12097.1634.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length182
Homology
BLAST of mRNA_E-fasciculatus_F_contig12097.1634.1 vs. uniprot
Match: A0A6H5K617_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K617_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 6.210e-98
Identity = 148/156 (94.87%), Postives = 151/156 (96.79%), Query Frame = 0
Query:   23 MLIINRTPNTLTNLTVELSTMGDLRLVERPQSHTIGPLDSRNIRANIKVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLVSVVYGNS 178
            ML+IN TPNTLTNLTVELSTMGDLRLVERPQSHTIGPLDSRNIRANIKVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFL + +Y  S
Sbjct:    1 MLVINHTPNTLTNLTVELSTMGDLRLVERPQSHTIGPLDSRNIRANIKVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLAANLYAMS 156          
BLAST of mRNA_E-fasciculatus_F_contig12097.1634.1 vs. uniprot
Match: D7G7C5_ECTSI (Coatomer subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C5_ECTSI)

HSP 1 Score: 298 bits (762), Expect = 2.580e-92
Identity = 155/178 (87.08%), Postives = 163/178 (91.57%), Query Frame = 0
Query:    1 YSETFVFFRNFDLVLLASRSSQMLIINRTPNTLTNLTVELSTMGDLRLVERPQSHTIGPLDSRNIRANIKVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLVSVVYGNS 178
            Y+E  V   ++D+VL      +ML+INRTPNTLTNLTVELSTMGDLRLVERPQSHTIGPLDSRNIRANIKVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFL + +Y  S
Sbjct:  739 YAEACVTVHDYDIVL------EMLVINRTPNTLTNLTVELSTMGDLRLVERPQSHTIGPLDSRNIRANIKVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLAANLYAMS 910          
BLAST of mRNA_E-fasciculatus_F_contig12097.1634.1 vs. uniprot
Match: A0A7S2V1X2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1X2_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.020e-78
Identity = 126/179 (70.39%), Postives = 149/179 (83.24%), Query Frame = 0
Query:    1 YSETFVFFRNFDLVLLASRSSQMLIINRTPNTLTNLTVELSTMGDLRLVERPQSHTIGPLDSRNIRANIKVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPAS-CSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLVSVVYGNS 178
            Y+E  V   ++D+VL      ++L+INRTPNTLTNLTVEL+TMGDL+LVERPQS+TIGPLD R IRANIKVSSTETGH+FGTIVYENSSTA+K YINLNDIH+DIMDYI P+S C+++AFR MW EFEWENKVA+NTSF +L+A+L HLVA TN  CLTP SSL G SSFL + +Y  S
Sbjct:   85 YAEALVTVHDYDIVL------EILVINRTPNTLTNLTVELATMGDLKLVERPQSYTIGPLDQRTIRANIKVSSTETGHVFGTIVYENSSTAQKAYINLNDIHLDIMDYIYPSSNCTDDAFRRMWEEFEWENKVAINTSFDELSAYLSHLVAHTNMACLTPTSSLGGQSSFLAANLYAKS 257          
BLAST of mRNA_E-fasciculatus_F_contig12097.1634.1 vs. uniprot
Match: A0A835Z7E2_9STRA (Coatomer subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E2_9STRA)

HSP 1 Score: 257 bits (657), Expect = 3.120e-77
Identity = 130/175 (74.29%), Postives = 151/175 (86.29%), Query Frame = 0
Query:    1 YSETFVFFRNFDLVLLASRSSQMLIINRTPNTLTNLTVELSTMGDLRLVERPQSHTIGPLDSRNIRANIKVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLVSVVY 175
            Y+E  V   ++D+VL      ++L+INRTP TLTNLTVEL+TMGDLRLVERPQ+HTIGPLD R IRANIKVSSTETGHIFGTIV+ENSSTAEK YINL+DIH+DIMDYI+PA+CSEEAFRSMWAEFEWENKV++NT+FTDLN FL HLVA+TNT CLTP S+  G SSFL + +Y
Sbjct:  732 YAEANVTVHDYDIVL------EILVINRTPQTLTNLTVELATMGDLRLVERPQAHTIGPLDQRTIRANIKVSSTETGHIFGTIVFENSSTAEKAYINLSDIHLDIMDYIRPATCSEEAFRSMWAEFEWENKVSINTTFTDLNEFLAHLVAQTNTTCLTPTSARHGPSSFLAANLY 900          
BLAST of mRNA_E-fasciculatus_F_contig12097.1634.1 vs. uniprot
Match: F0YGU1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGU1_AURAN)

HSP 1 Score: 242 bits (617), Expect = 9.220e-73
Identity = 123/178 (69.10%), Postives = 148/178 (83.15%), Query Frame = 0
Query:    1 YSETFVFFRNFDLVLLASRSSQMLIINRTPNTLTNLTVELSTMGDLRLVERPQSHTIGPLDSRNIRANIKVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLVSVVYGNS 178
            Y+E  V   ++D+VL       +LI+NRTP+TLTNLTVEL+TMGDL+L+ERPQS T+GPLD R+IRANIKVSSTETGHIFGTIVYE SSTAEKTYINLN+IH+DIMDYI+PASCS++AFR MWAEFEWENKVA++T+   LN FL+H+V  TN  CLTP SSL G+SSFL + +Y  S
Sbjct:  521 YAEACVTVHDYDIVL------DILIVNRTPSTLTNLTVELATMGDLKLIERPQSLTMGPLDQRSIRANIKVSSTETGHIFGTIVYEKSSTAEKTYINLNNIHLDIMDYIRPASCSDQAFRHMWAEFEWENKVAISTNIASLNDFLEHIVTSTNMCCLTPSSSLGGTSSFLAANLYAKS 692          
BLAST of mRNA_E-fasciculatus_F_contig12097.1634.1 vs. uniprot
Match: W7TX10_9STRA (Coatomer subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TX10_9STRA)

HSP 1 Score: 245 bits (626), Expect = 9.860e-73
Identity = 125/178 (70.22%), Postives = 147/178 (82.58%), Query Frame = 0
Query:    1 YSETFVFFRNFDLVLLASRSSQMLIINRTPNTLTNLTVELSTMGDLRLVERPQSHTIGPLDSRNIRANIKVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLVSVVYGNS 178
            Y+E +V   ++D+VL      ++L+INRT  TLTNLTVEL+TMGDL+L+ERPQSHTIGP D R IRANIKVSSTETGHIFGTIVYENSSTAEK  +NLNDI MDIMDYI+PASCS+EAFR+MWAEFEWENKVA+NT+F DL AFL H+V+ TN  CLTP SSL G S+FL + +Y  S
Sbjct:  750 YAEAYVTVHDYDIVL------EILVINRTKATLTNLTVELATMGDLKLIERPQSHTIGPQDQRIIRANIKVSSTETGHIFGTIVYENSSTAEKGTVNLNDIQMDIMDYIRPASCSDEAFRAMWAEFEWENKVAINTTFLDLQAFLTHVVSSTNMECLTPTSSLSGESAFLAANLYAKS 921          
BLAST of mRNA_E-fasciculatus_F_contig12097.1634.1 vs. uniprot
Match: A0A7S2KWV3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KWV3_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.240e-72
Identity = 112/159 (70.44%), Postives = 133/159 (83.65%), Query Frame = 0
Query:    1 YSETFVFFRNFDLVLLASRSSQMLIINRTPNTLTNLTVELSTMGDLRLVERPQSHTIGPLDSRNIRANIKVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTP 159
            Y+E FV   ++D++L       +L+INRTPNTL NLTVELSTMGD+++VERPQSHTIGPLD  NIRA+IKVSSTETGHIFGTIVYE++ST EK YIN+NDIHMDIMDYI+PA+C++E FRSMWAEFEWENKVA+ TS TDL  FL H+V+ TN   LTP
Sbjct:   38 YAEAFVTVHDYDILL------DILVINRTPNTLANLTVELSTMGDMKIVERPQSHTIGPLDQINIRASIKVSSTETGHIFGTIVYEDASTQEKGYINMNDIHMDIMDYIRPATCTDEVFRSMWAEFEWENKVAITTSITDLIKFLDHIVSSTNMKSLTP 190          
BLAST of mRNA_E-fasciculatus_F_contig12097.1634.1 vs. uniprot
Match: A0A7S1E5N2_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E5N2_9STRA)

HSP 1 Score: 223 bits (567), Expect = 2.910e-70
Identity = 115/178 (64.61%), Postives = 140/178 (78.65%), Query Frame = 0
Query:    1 YSETFVFFRNFDLVLLASRSSQMLIINRTPNTLTNLTVELSTMGDLRLVERPQSHTIGPLDSRNIRANIKVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLVSVVYGNS 178
            Y+E FV   ++D+VL      ++L+INRTPNTL NLTVELSTMGD+++VERPQ  T+GPLD   IRA+IKVSSTETGHIFGTIVY+++ST EK YINLNDIHMDIMDYI+PA+C++EAFRSMWAEFEWENKVA++TS   L  FLKH+V  TN  CLTP    +   SFL + +Y  S
Sbjct:   42 YAEAFVTVHDYDIVL------EILLINRTPNTLANLTVELSTMGDMKIVERPQPQTLGPLDQATIRASIKVSSTETGHIFGTIVYDDTSTMEKGYINLNDIHMDIMDYIRPATCTDEAFRSMWAEFEWENKVAISTSIPGLIEFLKHIVKSTNMCCLTPHDE-EEKGSFLAANLYARS 212          
BLAST of mRNA_E-fasciculatus_F_contig12097.1634.1 vs. uniprot
Match: A0A2D4BHB2_PYTIN (Coatomer subunit beta n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHB2_PYTIN)

HSP 1 Score: 236 bits (602), Expect = 2.730e-69
Identity = 117/178 (65.73%), Postives = 147/178 (82.58%), Query Frame = 0
Query:    1 YSETFVFFRNFDLVLLASRSSQMLIINRTPNTLTNLTVELSTMGDLRLVERPQSHTIGPLDSRNIRANIKVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLVSVVYGNS 178
            Y+E +V   ++D+VL      ++L++NR P TL NL+VELST+GDL+LVERPQ  TIGPLDSR IRANIKVSSTETGHIFGTIVY+++S AEKTY+NLNDIH+DIMDYI+PA+CS+ AFR+MWAEFEWENKVAVNT  T++  FL+H+V KTN NCLTP +SL G ++FL + +Y  S
Sbjct:  764 YAEAYVTVHDYDIVL------EILVVNRVPQTLNNLSVELSTIGDLKLVERPQPQTIGPLDSRTIRANIKVSSTETGHIFGTIVYDSTSGAEKTYVNLNDIHLDIMDYIQPATCSDAAFRAMWAEFEWENKVAVNTELTNVFEFLQHIVDKTNMNCLTPTASLGGDTNFLAANLYAKS 935          
BLAST of mRNA_E-fasciculatus_F_contig12097.1634.1 vs. uniprot
Match: A0A7S2YIL5_9STRA (Coatomer subunit beta n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YIL5_9STRA)

HSP 1 Score: 231 bits (590), Expect = 7.460e-68
Identity = 114/178 (64.04%), Postives = 142/178 (79.78%), Query Frame = 0
Query:    1 YSETFVFFRNFDLVLLASRSSQMLIINRTPNTLTNLTVELSTMGDLRLVERPQSHTIGPLDSRNIRANIKVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLVSVVYGNS 178
            Y+E  V   ++D+VL      ++L++NRTPNTL NLTVELSTMGD+++VERPQSHTIGPLD   IRA+IKVSSTETGHIFGTIVY++++T EK Y+NLNDIHMDIMDYI+PA+C++EAFRSMWAEFEWENKVA++TS T L  FL H+V+ TN +CLTP        SFL + +Y  S
Sbjct:  698 YAEALVTVHDYDIVL------EILVMNRTPNTLANLTVELSTMGDMKIVERPQSHTIGPLDQMTIRASIKVSSTETGHIFGTIVYDDAATMEKCYVNLNDIHMDIMDYIRPATCTDEAFRSMWAEFEWENKVAISTSITSLLEFLNHIVSSTNMSCLTPFDEKSEKGSFLAANLYARS 869          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12097.1634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K617_9PHAE6.210e-9894.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7C5_ECTSI2.580e-9287.08Coatomer subunit beta n=1 Tax=Ectocarpus siliculos... [more]
A0A7S2V1X2_9STRA1.020e-7870.39Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z7E2_9STRA3.120e-7774.29Coatomer subunit beta n=1 Tax=Tribonema minus TaxI... [more]
F0YGU1_AURAN9.220e-7369.10Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
W7TX10_9STRA9.860e-7370.22Coatomer subunit beta n=3 Tax=Monodopsidaceae TaxI... [more]
A0A7S2KWV3_9STRA1.240e-7270.44Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S1E5N2_9STRA2.910e-7064.61Hypothetical protein n=2 Tax=Thalassionema nitzsch... [more]
A0A2D4BHB2_PYTIN2.730e-6965.73Coatomer subunit beta n=1 Tax=Pythium insidiosum T... [more]
A0A7S2YIL5_9STRA7.460e-6864.04Coatomer subunit beta n=1 Tax=Amphiprora paludosa ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029446Coatomer beta subunit, appendage platform domainPFAMPF14806Coatomer_b_Cplacoord: 92..178
e-value: 9.3E-32
score: 109.7
IPR011710Coatomer beta subunit, C-terminalPFAMPF07718Coatamer_beta_Ccoord: 1..86
e-value: 2.4E-28
score: 98.8
IPR016460Coatomer beta subunit (COPB1)PANTHERPTHR10635COATOMER SUBUNIT BETAcoord: 1..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12097contigE-fasciculatus_F_contig12097:508..1998 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12097.1634.1mRNA_E-fasciculatus_F_contig12097.1634.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12097 508..1998 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12097.1634.1 ID=prot_E-fasciculatus_F_contig12097.1634.1|Name=mRNA_E-fasciculatus_F_contig12097.1634.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=182bp
YSETFVFFRNFDLVLLASRSSQMLIINRTPNTLTNLTVELSTMGDLRLVE
RPQSHTIGPLDSRNIRANIKVSSTETGHIFGTIVYENSSTAEKTYINLND
IHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVA
KTNTNCLTPLSSLDGSSSFLVSVVYGNSSLY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016460COPB1
IPR011710Coatomer_bsu_C
IPR029446COPB1_appendage_platform_dom