prot_E-fasciculatus_F_contig1209.1631.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1209.1631.1
Unique Nameprot_E-fasciculatus_F_contig1209.1631.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length359
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1209.1631.1 vs. uniprot
Match: A0A6H5K3H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H3_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 4.950e-120
Identity = 243/358 (67.88%), Postives = 253/358 (70.67%), Query Frame = 0 
Query:    1 MCWKRSMDVSWWLIFAVISSSSIVSGEQTPASPSSQHGIRIDSLRGRPPPXXXXXXXXXXXXXXXXXXXSPSPWSSPSRQQRHSTLSSTREEGCAGSASAPAAFLEHFSPAAAAXXXXXXXXXATARVPVLQQLPSKAANATRALLPLAPFVVEVPALAAHARAAWPWARSAAATAVAAALSRRPFAFVLPPTQPRPYRRWQXXXXXXXXXXXXXXXRAIARIREEREEQACRGPSPLGRRGYFSXXXXIDGGSSTNDRSALDPSNRSPSFFRDIDVATPSLTRRGAIEETLVSAARWWAVAAVGPSVAFADADVGATGVGDQMGSKAFTKESYDGFAEGYDDLDGGWAASAIGLEAS 358
            MCWKRS +VS WLIFAVIS+SSI SGEQ  ASP S HGIRIDS R RPPP                   SPSPWSSP RQQR+ST+ STRE+G  GSASAPAAFLEHFSP+AAAXXXXXXXXXA ARVPVLQ LPSKAAN TR LLPLAPFVVEVPALAAHARAA PWARSA   AVAAA SRRPFA                                             RG   L   G   XXXX   GSSTNDRSALDP++RSPS  RD+DVATPSLTRRGAIEETLVSAARWWAVAA G S AFADADVGATGVGDQ+ SKA TKESYDGFAEGYDDLDGGWAASAIGLEAS
Sbjct:    1 MCWKRSTEVSRWLIFAVISASSIASGEQPLASPPSHHGIRIDS-RARPPPSPDDTAATLTTSSSPAPI-SPSPWSSPPRQQRYSTVLSTREDGRVGSASAPAAFLEHFSPSAAAXXXXXXXXXAAARVPVLQHLPSKAANVTRNLLPLAPFVVEVPALAAHARAARPWARSAMTAAVAAAFSRRPFA---------------------------------------------RGFICLSGGGXXXXXXX---GSSTNDRSALDPNSRSPSCCRDVDVATPSLTRRGAIEETLVSAARWWAVAAAGSSGAFADADVGATGVGDQLSSKALTKESYDGFAEGYDDLDGGWAASAIGLEAS 308
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BLAST of mRNA_E-fasciculatus_F_contig1209.1631.1 vs. uniprot
Match: D8LQ21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ21_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 2.050e-22
Identity = 52/61 (85.25%), Postives = 54/61 (88.52%), Query Frame = 0 
Query:  296 ARWWAVAAVGPSVAFADADVGATGVGDQMGSKAFTKESYDGFAEGYDDLDGGWAASAIGLE 356
            ARWWAVAA   S AFAD DVGATGVGDQ+ SKA TKESYDGFAEGYD+LDGGWAASAIGLE
Sbjct:    2 ARWWAVAAAASSGAFADTDVGATGVGDQLSSKALTKESYDGFAEGYDNLDGGWAASAIGLE 62
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1209.1631.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K3H3_9PHAE4.950e-12067.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ21_ECTSI2.050e-2285.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..358
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.774

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1209contigE-fasciculatus_F_contig1209:16267..17791 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1209.1631.1mRNA_E-fasciculatus_F_contig1209.1631.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1209 12486..17857 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1209.1631.1 ID=prot_E-fasciculatus_F_contig1209.1631.1|Name=mRNA_E-fasciculatus_F_contig1209.1631.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=359bp
MCWKRSMDVSWWLIFAVISSSSIVSGEQTPASPSSQHGIRIDSLRGRPPP
PSPDATAATSAFSSSPAPVSPSPWSSPSRQQRHSTLSSTREEGCAGSASA
PAAFLEHFSPAAAASAAAASVASATARVPVLQQLPSKAANATRALLPLAP
FVVEVPALAAHARAAWPWARSAAATAVAAALSRRPFAFVLPPTQPRPYRR
WQQQQQQQQQQQQQQQPRAIARIREEREEQACRGPSPLGRRGYFSXXXXI
DGGSSTNDRSALDPSNRSPSFFRDIDVATPSLTRRGAIEETLVSAARWWA
VAAVGPSVAFADADVGATGVGDQMGSKAFTKESYDGFAEGYDDLDGGWAA
SAIGLEAS*
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