mRNA_E-fasciculatus_F_contig1209.1631.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1209.1631.1
Unique NamemRNA_E-fasciculatus_F_contig1209.1631.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1209.1631.1 vs. uniprot
Match: A0A6H5K3H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H3_9PHAE)

HSP 1 Score: 625 bits (1611), Expect = 2.230e-214
Identity = 408/681 (59.91%), Postives = 421/681 (61.82%), Query Frame = 1 
Query:   67 MCWKRSMDVSWWLIFAVISSSSIVSGEQTPASPSSQHGIRIDSLRGRPPPXXXXXXXXXXXXXXXXXXXSPSPWSSPSRQQRHSTLSSTREEGCAGSASAPAAFLEHFSPAAAAXXXXXXXXXATARVPVLQQLPSKAANATRALLPLAPFVVEVPALAAHARAAWPWARSAAATAVAAALSRRPFAFVLPPTQPRPYRRWQXXXXXXXXXXXXXXXRAIARIREEREEQACRGPSPLGRRGYFSXXXXIDGGSSTNDRSALDPSNRSPSFFRDIDVATPSLTRRGAIEETLVSAARWWAVAAVGPSVAFADADVGATGVGDQMGSKAFTKESYDGFAEGYDDLDGGWAASAIGLEAS*TALDVCPS*LCCLSFLQRNNLVLFFSNIRKQSWFFYVATHTGAFFCDDTVCF*WRRGRYVSIDTNRVSFWLTTSGYSAFV*TAHPSCPSNR*PTIPVYREQHVNPRATDAPCS*G*VTLYFPQPAAVWMCFLQELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSTIEAVDLSPGMLSQASSRSESLGMKRLVKLSVMDAEHLSFPSEAFDAVVDTFSLCVFSDPSAALREMARVCKPSGRVLLLENSKSDFGPLAAYQDLTASFLANKGGAKGCFWNQDVEALCRGAGLEVVRSSPALAGGVFRTLECAPAKVNGRSSG 2109
            MCWKRS +VS WLIFAVIS+SSI SGEQ  ASP S HGIRIDS R RPPP                   SPSPWSSP RQQR+ST+ STRE+G  GSASAPAAFLEHFSP+AAAXXXXXXXXXA ARVPVLQ LPSKAAN TR LLPLAPFVVEVPALAAHARAA PWARSA   AVAAA SRRPFA                                             RG   L   G   XXXX   GSSTNDRSALDP++RSPS  RD+DVATPSLTRRGAIEETLVSAARWWAVAA G S AFADADVGATGVGDQ+ SKA TKESYDGFAEGYDDLDGGWAASAIGLEAS                                                                                                                                               ATGRVLEVGVGTGLNLRHYRRDLVS IEAVDLSPGMLSQASSRSESLGMKRLV LSVMD EHL FPSEAFD VVDTFSLCVFSDPSAALREMARVCKP+GRVLLLENSKS+FGPLAAYQD TASFL NKGGAKGCFWNQDVEALCRGAGLEVVRSSPALAGG+FRTLEC PAKV G   G
Sbjct:    1 MCWKRSTEVSRWLIFAVISASSIASGEQPLASPPSHHGIRIDS-RARPPPSPDDTAATLTTSSSPAPI-SPSPWSSPPRQQRYSTVLSTREDGRVGSASAPAAFLEHFSPSAAAXXXXXXXXXAAARVPVLQHLPSKAANVTRNLLPLAPFVVEVPALAAHARAARPWARSAMTAAVAAAFSRRPFA---------------------------------------------RGFICLSGGGXXXXXXX---GSSTNDRSALDPNSRSPSCCRDVDVATPSLTRRGAIEETLVSAARWWAVAAAGSSGAFADADVGATGVGDQLSSKALTKESYDGFAEGYDDLDGGWAASAIGLEAS-----------------------------------------------------------------------------------------------------------------------------------------------ATGRVLEVGVGTGLNLRHYRRDLVSAIEAVDLSPGMLSQASSRSESLGMKRLVNLSVMDVEHLGFPSEAFDTVVDTFSLCVFSDPSAALREMARVCKPAGRVLLLENSKSNFGPLAAYQDFTASFLVNKGGAKGCFWNQDVEALCRGAGLEVVRSSPALAGGLFRTLECVPAKVMGGGGG 488
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BLAST of mRNA_E-fasciculatus_F_contig1209.1631.1 vs. uniprot
Match: D8LQ21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ21_ECTSI)

HSP 1 Score: 385 bits (989), Expect = 8.800e-125
Identity = 227/379 (59.89%), Postives = 232/379 (61.21%), Query Frame = 1 
Query:  952 ARWWAVAAVGPSVAFADADVGATGVGDQMGSKAFTKESYDGFAEGYDDLDGGWAASAIGLEAS*TALDVCPS*LCCLSFLQRNNLVLFFSNIRKQSWFFYVATHTGAFFCDDTVCF*WRRGRYVSIDTNRVSFWLTTSGYSAFV*TAHPSCPSNR*PTIPVYREQHVNPRATDAPCS*G*VTLYFPQPAAVWMCFLQELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSTIEAVDLSPGMLSQASSRSESLGMKRLVKLSVMDAEHLSFPSEAFDAVVDTFSLCVFSDPSAALREMARVCKPSGRVLLLENSKSDFGPLAAYQDLTASFLANKGGAKGCFWNQDVEALCRGAGLEVVRSSPALAGGVFRTLECAPAK 2088
            ARWWAVAA   S AFAD DVGATGVGDQ+ SKA TKESYDGFAEGYD+LDGGWAASAIGLE                                                                                                                                        ELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVS IEAVDLSPGMLSQASSRSESLGM+RLVKLSVMDAEHL FPSEAFD VVDTFSLCVFSDPSAALREMARVCKP+GRVLLLENSKSDFGPLAAYQDLTASFL NKGGAKGCFWNQDVEALCRGAGLEVVRSSPALAGG+FRTLECAPAK
Sbjct:    2 ARWWAVAAAASSGAFADTDVGATGVGDQLSSKALTKESYDGFAEGYDNLDGGWAASAIGLE----------------------------------------------------------------------------------------------------------------------------------------ELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSGIEAVDLSPGMLSQASSRSESLGMERLVKLSVMDAEHLGFPSEAFDTVVDTFSLCVFSDPSAALREMARVCKPAGRVLLLENSKSDFGPLAAYQDLTASFLVNKGGAKGCFWNQDVEALCRGAGLEVVRSSPALAGGLFRTLECAPAK 244
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BLAST of mRNA_E-fasciculatus_F_contig1209.1631.1 vs. uniprot
Match: A0A836CG23_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG23_9STRA)

HSP 1 Score: 194 bits (492), Expect = 6.650e-53
Identity = 107/184 (58.15%), Postives = 124/184 (67.39%), Query Frame = 1 
Query: 1537 LQELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSTIEAVDLSPGMLSQASSRSESLGMKRLVKLSVMDAEHLSFPSEAFDAVVDTFSLCVFSDPSAALREMARVCKPSGRVLLLENSKSDFGPLAAYQDLTASFLANKGGAKGCFWNQDVEALCRGAGLEVVRSSPALAGGVFRTLECAPAK 2088
            + +LR  + + A GRVLEV VGTGLNL +YRRD VS I+AVDLSP ML+QA  R    G++ +     MD E L F    FD VVDTF LCVF DP AALREM RVC  +GRVLLLENSKS+   L AYQDLTA  L+    +KGC WNQDVEAL R AGL VV S    AG +FR +EC P +
Sbjct:   47 IDQLRQIMTSTARGRVLEVAVGTGLNLPYYRRDRVSQIDAVDLSPSMLAQAEQRGVEAGLQDIAAYHEMDVEQLKFRDGTFDTVVDTFGLCVFGDPVAALREMGRVCATNGRVLLLENSKSEVPLLGAYQDLTAGALSRI--SKGCVWNQDVEALARSAGLTVVHSYKCAAG-LFRAVECTPGR 227
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BLAST of mRNA_E-fasciculatus_F_contig1209.1631.1 vs. uniprot
Match: A0A7S2B2V6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B2V6_9STRA)

HSP 1 Score: 170 bits (431), Expect = 3.730e-45
Identity = 93/179 (51.96%), Postives = 124/179 (69.27%), Query Frame = 1 
Query: 1546 LRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSTIEAVDLSPGMLSQASSRSESLGMKRLVKLSVMDAEHLSFPSEAFDAVVDTFSLCVFSDPSAALREMARVCKPSGRVLLLENSKSDFGPLAAYQDLTASFLANKGGAKGCFWNQDVEALCRGAGLEVVRSSPALAGGVFRTLECAP 2082
            LR+ L+  A+GRVLEVGVGTGLNL  Y    V+++E +DLS GMLS A ++ +++ +   V+LS MD   L FPS +FD VVDTFSLCVF DP  AL+EM RVC P GR+LLLE+S ++   +A YQD+TA+ + +   +KGC WNQ +  L + AGLEV RS  ++ GGV R +E  P
Sbjct:    1 LRAMLIGKASGRVLEVGVGTGLNLPFYDTTRVTSLEGIDLSDGMLSIAQTKRKAIPLNDKVRLSRMDVSALDFPSRSFDTVVDTFSLCVFPDPQKALQEMCRVCAPDGRLLLLEHSAAENPLVALYQDVTAAPITSM--SKGCVWNQRLGPLLQNAGLEV-RSQRSVLGGVLRVIEATP 176
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BLAST of mRNA_E-fasciculatus_F_contig1209.1631.1 vs. uniprot
Match: A0A061R1H8_9CHLO (Methyltransferase type 11 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R1H8_9CHLO)

HSP 1 Score: 166 bits (420), Expect = 2.640e-42
Identity = 97/183 (53.01%), Postives = 114/183 (62.30%), Query Frame = 1 
Query: 1537 LQELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSTIEAVDLSPGMLSQASSRSESLGMKRLVKLSVMDAEHLSFPSEAFDAVVDTFSLCVFSDPSAALREMARVCKPSGRVLLLENSKSDFGPLAAYQDLTASFLANKGGAKGCFWNQDVEALCRGAGLEVVRSSPALAGGVFRTLECAPA 2085
            L ELR  LL  A+G VLEVGVGTG+NL  Y +  VS++  VDLS GML +A  R   +G   LV L   D E L F   +FDAVVDTFSLCV+ DP  ALREMARV +P G VLLL +++S F PLA YQD TA  +   G  +GC WNQDV  L   AGLEVV     L GG+   +   PA
Sbjct:  107 LPELRRSLLRRASGNVLEVGVGTGINLPLYDKRKVSSVTGVDLSVGMLHEAEQRVRRIGSDGLVTLQQADVESLPFADSSFDAVVDTFSLCVYPDPLQALREMARVLRPGGSVLLLAHTRSTFTPLAVYQDATAQVVRRMG--RGCEWNQDVGGLAASAGLEVVEQERHL-GGLISLVVAHPA 286
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BLAST of mRNA_E-fasciculatus_F_contig1209.1631.1 vs. uniprot
Match: A0A8J9WTP0_9CHLO (Probable ubiquinone/menaquinone biosynthesis C-methyltransferase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WTP0_9CHLO)

HSP 1 Score: 161 bits (407), Expect = 2.860e-41
Identity = 91/177 (51.41%), Postives = 115/177 (64.97%), Query Frame = 1 
Query: 1543 ELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSTIEAVDLSPGMLSQASSRSESLGMKRLVKLSVMDAEHLSFPSEAFDAVVDTFSLCVFSDPSAALREMARVCKPSGRVLLLENSKSDFGPLAAYQDLTASFLANKGGAKGCFWNQDVEALCRGAGLEVVRSSPALAGGVFRTLE 2073
            ELR +L+A A G+VLE+ VGTGLNL  Y  D + ++ A+D+S GML QA  R++ L  +  V     D   L F +  FD V+DTFSLCVF DP+AA+RE ARV +P G +LLLE+ +S F PLA YQDLTA  +A  G  KGCFWNQDV  L   AGL V R   ++ GG+   LE
Sbjct:   50 ELRRELIAEAHGKVLELAVGTGLNLPLYHPDQLESLSALDISAGMLQQARMRAQGLSSQLPVTFLQGDVAALPFEAAYFDCVLDTFSLCVFPDPAAAVREAARVLRPGGTLLLLEHQRSPFAPLAWYQDLTADAVAAMG--KGCFWNQDVAGLLNAAGLRVQRKKESI-GGLIVLLE 223
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BLAST of mRNA_E-fasciculatus_F_contig1209.1631.1 vs. uniprot
Match: A0A7S0WEJ0_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WEJ0_9CHLO)

HSP 1 Score: 161 bits (408), Expect = 4.550e-41
Identity = 91/173 (52.60%), Postives = 114/173 (65.90%), Query Frame = 1 
Query: 1537 LQELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSTIEAVDLSPGMLSQASSRSESLGMKRLVKLSV-MDAEHLSFPSEAFDAVVDTFSLCVFSDPSAALREMARVCKPSGRVLLLENSKSDFGPLAAYQDLTASFLANKGGAKGCFWNQDVEALCRGAGLEVVRSSPALAG 2052
            L  +R   L GA+G VLE+ VGTGLNL  Y    ++T  A+DLSPGML+QA  R++ L  +R     +  DA  L F   +FD VVDTFSLCV  +  AALRE+ RV +PSGR +L+E+SKSD GPL AYQDLT+  +  K  +KGC WNQDVE L R +GL+VV    AL G
Sbjct:   76 LDAMRGDALRGASGDVLELAVGTGLNLASYDMSKINTFTAIDLSPGMLAQAKVRADELNFRRESSRFIEADATALPFEDASFDVVVDTFSLCVIENSVAALREVRRVLRPSGRAVLIEHSKSDVGPLGAYQDLTSKPV--KSMSKGCVWNQDVEGLLRESGLKVVSVQRALLG 246
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BLAST of mRNA_E-fasciculatus_F_contig1209.1631.1 vs. uniprot
Match: A0A836BNX8_9CHLO (Methyltransf_11 domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BNX8_9CHLO)

HSP 1 Score: 159 bits (401), Expect = 7.550e-40
Identity = 99/193 (51.30%), Postives = 119/193 (61.66%), Query Frame = 1 
Query: 1543 ELRSQLLAGATGRVLEVGVGTGLNLRHYRRDL-------------------VSTIEAVDLSPGMLSQASSRSESLGMK--RLVKLSVMDAEHLSFPSEAFDAVVDTFSLCVFSDPSAALREMARVCKPSGRVLLLENSKSDFGPLAAYQDLTASFLANKGGAKGCFWNQDVEALCRGAGLEVVRSSPALAGGV 2058
            +LR QLLA A GRVLEV VGTGLNL +Y  D                    VS++EAVDLSPGML QA  R+++      R +     D   L +  ++FD+VVDTFSLCVF DP  AL+EMARV +PSGRVLLLE+++SD   LAAYQD TA  +A  G  KGC WNQDVE L   AGL V  +  + AG V
Sbjct:   80 QLRQQLLAQARGRVLEVAVGTGLNLPYYSWDERSGAASGDEAAAAVAESRGVSSVEAVDLSPGMLDQARRRTQASPALSGRSISFRQADVTALPYGDDSFDSVVDTFSLCVFPDPGTALKEMARVVRPSGRVLLLEHTRSDNPLLAAYQDATAGPVAALG--KGCVWNQDVEGLAAAAGLRVEAAERSAAGTV 270
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BLAST of mRNA_E-fasciculatus_F_contig1209.1631.1 vs. uniprot
Match: I0YQ96_COCSC (UbiE/COQ5 methyltransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YQ96_COCSC)

HSP 1 Score: 154 bits (390), Expect = 3.450e-39
Identity = 89/170 (52.35%), Postives = 105/170 (61.76%), Query Frame = 1 
Query: 1543 ELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVSTIEAVDLSPGMLSQASSRSESLGMKRLVKLSVMDAEHLSFPSEAFDAVVDTFSLCVFSDPSAALREMARVCKPSGRVLLLENSKSDFGPLAAYQDLTASFLANKGGAKGCFWNQDVEALCRGAGLEVVRSSPALAG 2052
            ELR +L+  A G VLE+ VGTGLNL  Y    V  + A+DLS GML QA  R + LG    V     D   L F S  FD V+DTFSLCVF D +AALRE ARV KP G++LLLE+ +S   PLA YQD+TA  +A  G  KGCFWNQDV  L   AGL +V    +L G
Sbjct:   33 ELRRELIEQAHGSVLELAVGTGLNLPVYNPSHVKALTALDLSAGMLQQARKRVKGLGDPLPVTFVQGDVAALPFESATFDCVIDTFSLCVFPDAAAALREAARVVKPGGQLLLLEHQRSPIAPLAWYQDVTADAVAAMG--KGCFWNQDVAGLLSAAGLRIVTKKESLGG 200
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1209.1631.1 vs. uniprot
Match: A0A4D9D970_9STRA (THUMP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D970_9STRA)

HSP 1 Score: 166 bits (419), Expect = 8.890e-39
Identity = 98/187 (52.41%), Postives = 124/187 (66.31%), Query Frame = 1 
Query: 1537 LQELRSQLLAGATGRVLEVGVGTGLNLRHYRRDLVS----TIEAVDLSPGMLSQASSRSESLGM-KRLVKLSVMDAEHLSFPSEAFDAVVDTFSLCVFSDPSAALREMARVCKP-SGRVLLLENSKSDFGPLAAYQDLTASFLANKGGAKGCFWNQDVEALCRGAGLEVVRSSPALAGGVFRTLECA 2079
            L   R  L+  A G +LE GVGTGLNL  Y     S    +++A+DLSPGML +A S++  L +    V+   MD   ++F  E+FD V DTFSLCV+ DP+ AL+EMARVCK  SGRVLLLENS+S+  P+AAYQD+TA F+A  GG KGC +NQDV +L R AGL V+   P L GG+   LECA
Sbjct:  570 LDAARKDLIGLARGHILECGVGTGLNLPFYEFGSGSAPAVSLDAIDLSPGMLREARSKAAFLNLGPDAVRFHEMDVAKMNFADESFDCVCDTFSLCVYLDPAKALKEMARVCKAVSGRVLLLENSRSNLLPVAAYQDVTAGFVARYGG-KGCVYNQDVASLARQAGLRVMSQKPLL-GGLITMLECA 754
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1209.1631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3H3_9PHAE2.230e-21459.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ21_ECTSI8.800e-12559.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CG23_9STRA6.650e-5358.15S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A7S2B2V6_9STRA3.730e-4551.96Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A061R1H8_9CHLO2.640e-4253.01Methyltransferase type 11 n=1 Tax=Tetraselmis sp. ... [more]
A0A8J9WTP0_9CHLO2.860e-4151.41Probable ubiquinone/menaquinone biosynthesis C-met... [more]
A0A7S0WEJ0_9CHLO4.550e-4152.60Hypothetical protein n=2 Tax=Ostreococcus mediterr... [more]
A0A836BNX8_9CHLO7.550e-4051.30Methyltransf_11 domain-containing protein n=1 Tax=... [more]
I0YQ96_COCSC3.450e-3952.35UbiE/COQ5 methyltransferase n=1 Tax=Coccomyxa sube... [more]
A0A4D9D970_9STRA8.890e-3952.41THUMP domain-containing protein n=2 Tax=Monodopsid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1209contigE-fasciculatus_F_contig1209:12486..17857 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score105.5
Seed ortholog evalue5.2e-20
Seed eggNOG ortholog2880.D8LQ21
KEGG koko:K17803
EggNOG free text desc.methyltransferase activity
EggNOG OGsCOG0500@1,KOG4300@2759
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-15_001250.1
Exons5
Model size2649
Cds size1077
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927719.4969945-UTR-E-fasciculatus_F_contig1209:12485..132421622927719.4969945-UTR-E-fasciculatus_F_contig1209:12485..13242Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1209 12486..13242 -
1695995664.3885536-UTR-E-fasciculatus_F_contig1209:12485..132421695995664.3885536-UTR-E-fasciculatus_F_contig1209:12485..13242Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1209 12486..13242 -
1622927719.5336661-UTR-E-fasciculatus_F_contig1209:13645..137131622927719.5336661-UTR-E-fasciculatus_F_contig1209:13645..13713Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1209 13646..13713 -
1695995664.401782-UTR-E-fasciculatus_F_contig1209:13645..137131695995664.401782-UTR-E-fasciculatus_F_contig1209:13645..13713Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1209 13646..13713 -
1622927719.5469506-UTR-E-fasciculatus_F_contig1209:14687..148251622927719.5469506-UTR-E-fasciculatus_F_contig1209:14687..14825Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1209 14688..14825 -
1695995664.4099329-UTR-E-fasciculatus_F_contig1209:14687..148251695995664.4099329-UTR-E-fasciculatus_F_contig1209:14687..14825Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1209 14688..14825 -
1622927719.5616183-UTR-E-fasciculatus_F_contig1209:15723..162661622927719.5616183-UTR-E-fasciculatus_F_contig1209:15723..16266Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1209 15724..16266 -
1695995664.4181771-UTR-E-fasciculatus_F_contig1209:15723..162661695995664.4181771-UTR-E-fasciculatus_F_contig1209:15723..16266Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1209 15724..16266 -
1622927719.6182952-UTR-E-fasciculatus_F_contig1209:17791..178571622927719.6182952-UTR-E-fasciculatus_F_contig1209:17791..17857Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1209 17792..17857 -
1695995664.4612517-UTR-E-fasciculatus_F_contig1209:17791..178571695995664.4612517-UTR-E-fasciculatus_F_contig1209:17791..17857Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1209 17792..17857 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927719.5796537-CDS-E-fasciculatus_F_contig1209:16266..172691622927719.5796537-CDS-E-fasciculatus_F_contig1209:16266..17269Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1209 16267..17269 -
1695995664.4270566-CDS-E-fasciculatus_F_contig1209:16266..172691695995664.4270566-CDS-E-fasciculatus_F_contig1209:16266..17269Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1209 16267..17269 -
1622927719.5927856-CDS-E-fasciculatus_F_contig1209:17717..177911622927719.5927856-CDS-E-fasciculatus_F_contig1209:17717..17791Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1209 17718..17791 -
1695995664.4475555-CDS-E-fasciculatus_F_contig1209:17717..177911695995664.4475555-CDS-E-fasciculatus_F_contig1209:17717..17791Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1209 17718..17791 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1209.1631.1prot_E-fasciculatus_F_contig1209.1631.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1209 16267..17791 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1209.1631.1

>prot_E-fasciculatus_F_contig1209.1631.1 ID=prot_E-fasciculatus_F_contig1209.1631.1|Name=mRNA_E-fasciculatus_F_contig1209.1631.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=359bp
MCWKRSMDVSWWLIFAVISSSSIVSGEQTPASPSSQHGIRIDSLRGRPPP
PSPDATAATSAFSSSPAPVSPSPWSSPSRQQRHSTLSSTREEGCAGSASA
PAAFLEHFSPAAAASAAAASVASATARVPVLQQLPSKAANATRALLPLAP
FVVEVPALAAHARAAWPWARSAAATAVAAALSRRPFAFVLPPTQPRPYRR
WQQQQQQQQQQQQQQQPRAIARIREEREEQACRGPSPLGRRGYFSXXXXI
DGGSSTNDRSALDPSNRSPSFFRDIDVATPSLTRRGAIEETLVSAARWWA
VAAVGPSVAFADADVGATGVGDQMGSKAFTKESYDGFAEGYDDLDGGWAA
SAIGLEAS*
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mRNA from alignment at E-fasciculatus_F_contig1209:12486..17857-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1209.1631.1 ID=mRNA_E-fasciculatus_F_contig1209.1631.1|Name=mRNA_E-fasciculatus_F_contig1209.1631.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5372bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1209:12486..17857- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGGGGCATGTTGTCATCATGTTGGGATCCCCGTGACTACCTACCCACCT
CACAAACACTAGAGCTATGTGCTGGAAAAGATCGATGGACGTTTCTTGGT
GGCTGATTTTTGCCGTTATCAGTTCTTCCAGCATCGTCAGGTGAGCTGCA
GTTTGGGCAGCAGCAGCACACACCAGGAACCTCTGCATGTTTCCTCCTGT
GGGAAGCAGCAGCACACACGAACCTCTGCACATGTTTACCTGCTGTGGGC
TCCGTGGCGACTCTCCCCAAGGGTCCGATTGAGGCTAGTTTGGAATACCC
GCGTCGCTTGACTCTCCCGTATGAAACTTCAGCTGAACACACTCTCTGGA
CGCAGCACCTACTTGTAAAACTAATAAACCGGATTTTTGTCGAACCCCTT
GGTGCAACGGGCGTTGTGCGGGCGTAACCCAGCGTACATTGTACCTAACC
ATACAGCAGGCGAGGTTGCGTGCACATCTACCAATTGCTGGAGGATAACC
CATTCGTTTGCTGTGCCCTCGGTCCGCCGGCCTACTCTCTTCCTCGTGTT
TCCATCCATGCATCATGCATGCGTTCTCTCACTCTCAGCGGGGAGCAGAC
CCCCGCTTCTCCGTCTTCCCAGCACGGGATTCGCATCGACAGCCTCCGAG
GAAGGCCACCACCACCCTCGCCCGATGCCACCGCGGCAACATCAGCATTC
AGTTCCTCACCAGCACCGGTATCGCCATCGCCATGGTCTTCGCCGTCACG
ACAACAACGGCACTCGACGCTGTCATCAACACGAGAAGAGGGCTGCGCTG
GCTCCGCCAGCGCGCCAGCTGCCTTTCTCGAGCATTTTTCTCCCGCCGCA
GCCGCATCGGCCGCTGCAGCGAGCGTGGCGTCGGCTACCGCCCGGGTACC
GGTGCTGCAACAGCTTCCATCGAAGGCCGCGAACGCAACCCGGGCCCTGT
TGCCGCTGGCACCCTTCGTTGTCGAAGTCCCGGCGCTTGCGGCGCACGCC
CGCGCCGCTTGGCCGTGGGCGCGCTCCGCTGCGGCCACCGCCGTCGCCGC
CGCGTTATCCCGCCGCCCGTTCGCGTTTGTCCTCCCTCCCACCCAACCCC
GACCCTACCGGCGATGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCCAAGAGCGATAGCGAGAATACGGGAGGAGCGAGAAGA
ACAAGCCTGCCGTGGACCCTCTCCGCTTGGCAGGCGCGGTTATTTTAGCN
NNNNNNNNNGAATCGACGGCGGTAGTAGCACGAACGACCGGAGCGCTCTT
GATCCGAGTAATCGGTCTCCCTCTTTCTTCCGTGACATCGACGTCGCGAC
GCCATCCTTAACGCGACGCGGGGCAATAGAGGAAACGCTTGTCTCCGCGG
CGCGGTGGTGGGCAGTGGCAGCGGTGGGACCGTCGGTGGCGTTCGCGGAT
GCTGACGTGGGGGCAACAGGGGTTGGGGATCAGATGGGTTCGAAGGCGTT
CACGAAGGAATCCTACGACGGTTTCGCCGAGGGGTACGATGACCTGGACG
GCGGTTGGGCGGCATCGGCCATCGGACTGGAGGCGAGTTAGACCGCGCTT
GACGTTTGCCCTTCTTAGTTATGTTGTCTTTCCTTCTTACAGCGCAACAA
TCTTGTTTTGTTTTTTTCTAATATAAGAAAACAATCTTGGTTCTTCTACG
TGGCGACGCACACTGGTGCCTTTTTTTGTGATGACACCGTGTGCTTTTAA
TGGCGGCGTGGCCGATATGTATCAATCGACACCAATCGTGTGAGCTTTTG
GTTGACGACGTCGGGGTATTCTGCGTTTGTTTGAACCGCTCATCCGTCCT
GCCCAAGCAACCGGTGACCCACCATACCCGTTTATCGAGAGCAGCACGTG
AATCCGAGGGCAACTGATGCTCCTTGTTCCTGAGGGTAGGTAACCTTATA
TTTTCCTCAACCTGCTGCCGTCTGGATGTGCTTCCTGCAGGAGCTGCGAT
CACAGTTGCTCGCGGGCGCCACCGGGCGGGTGCTAGAGGTCGGGGTGGGC
ACGGGACTCAACCTGCGGCACTACCGGCGAGACCTCGTGTCGACCATCGA
GGCAGTGGACCTGAGTCCGGGCATGCTGAGCCAGGTTTGACGCGCTCTGA
TTCCGTCCGTGTTGAGCTAGGTCCTTTCTCAGACATATGTTGGTTTCCTC
TCGAATGTTTGTAACTGCCAGCTGTGTGACGTTGACCGGGCCGATTTTGT
GCAATCCGAGGGGGCTCCGTGTCTCGAGTTATTCTCGATTTACCTCCAAA
CCAAACGCCGAATGCTGGGCAAATGCTCAACCCGCATACCATGCGCGGAA
GGTGCATGGTCCACGCGATATAGGCACGGTTTGTGGGGCAATCGATTGGC
CGCCTCAGTCGCCACCATTTAATACCCCTCTCTTGTCTACCCCTCCACCA
GCAGACTGAATGATTTTACCTGCTCAACAGCGACGAAAAATACCACACCC
ACATATTGTAAGACCACCCCCACAGTAAATACCTCACCCGGTGGCAACAT
TTTTCAGGTCAACATCAGGAGCCCAAAACGTAAAACTATTCTCATGTCCA
AGTAATCGGGCGCCATGAGATACCACATACCCCACACAAGAACACACCCG
GTGATATCGGGGTGTGTGTTTTCTTGTGTCACATACGGTATGCAGTGACG
CACAAGGATTCCTATTCGAGGATGGAGTGGCGTGCTTGATCTCTGCGTGG
GGTTTCGTGTTGATGAACACCGTACGAAGACACAGCAGATGCTGTGGCAC
AGTACGGACGCACAATTCGACGATGAACAAACGATTGCTACCAGTGCCAA
CGTCGTTTTGCGGACGTTCTTGTTCTCTCATTGGCCTAACACGACCGTCC
TCAACAACTCGGCGGTGCTACGCGATGACACGCGCAGTTTTGACATTTTT
GTTCCGACGTAAGAGCTCGTCCTCGTTCTCACAACACGACCGTTCGCAAC
AATTGACGGTGTTTTCGCGATGACACGGGCAGGCATCGTCGAGGAGCGAG
TCCCTGGGCATGAAACGGCTCGTCAAGCTGTCGGTGATGGACGCTGAGCA
CCTCAGTTTTCCATCAGAGGCATTCGACGCGGTCGTGGACACCTTTTCCC
TCTGCGTTTTTTCAGATCCGGTGCGTGCAGCAGCAGCTTATTGGGGTTAC
TTTTCCTTGGCACAACGGACCGTATCGTGCCAATCTCGAGTATAGGAGAT
AGTCGACAAACGCGTTTACGAACTGACTGAAAAAACGATGGTTGATGTTG
GGTCCATCGGAACACGGTTGCTCCTTCTCCCTCCACAAATCTGTCTTTCG
ATTCTGTATGTTGCTTCGCGTTGCGGTGTATAGGTTGTGGAAGACTTTCT
CCGTTGGTTGTCCGCGAGAACGTAGCGTTTCCATTCCGATAGACTCTGTA
GTTGTGTCCGGGATCTTCTTCTTCGGAGCGGTTATATTCGAAATGTTTCG
GAGGAATGGATGAATACGATGTGCCACTGCTGCTCACCGTCGTGTACTTG
GAACCGCGGTTGTGTACTTGGAACCGGGTTGTGTACTTGGAACCGCGTCG
CGCCCGTGGTTTGGGAAGCAGATTGATTGGGCTTGCTTCTCCCGATACAC
GTTCATTCTATTGTAGTGACTGTGATTACCTTGCATCATATGGAGAACAT
GTTCTCGTCGATGCATGTAGTACACTGTCACAGGAGGTCATGTTTTCGTC
GTCGGTGTATGCACACGATCACAGGAGGTCACGTATTGGTCGGTGCATGT
ATGTTTATACACTGCGTAGGTTCTTTCGGCGAGCCGCTCTCTCTCTCTCT
TCACACCGCTGCAGCCAGGGGCGCTGCCGCTAGACGTGTCACGTACTACC
CATTTCCCGGACCCGTCCTGTGTGCCTTTGTCATTTCGACTCTGCATTGG
TCCCTACGTTTTTCCTCAGCGGAGCGCGTGTGAGTGTGTAGCAGCAGACC
AACACCATCGCCCATTTGATTGGCCATCGCCGTTACCGCTCGCCGTTTTT
GTTTGACATATGTGTGTGTGTGCACACCGCCCTTGCTGATTTGATGCTGC
ACGCATATAATCAACCTGTGGCAATACCACGCGCGACGAAGTAGTCGGCT
GCCCTGCGTGAGATGGCCCGGGTTTGCAAGCCGTCGGGACGGGTACTTCT
TCTGGAGAATAGGTGAGTTTTCTCGCATGGCTTGGTCTGGCAAAGGGACG
GCAGTAACTGCCGGCGGAGATCGGTACAAGAGGCTGCTGTGTGGTACCAT
GAGTTATGTCCAAGCCAAGCCAATGCCACCCACGCCTGGCATTTCTATCT
CATTTCGTAGACGAGTGTTGCTACTGGTTGTTTGTTTGCCCTCGTGTCCC
ACGCGCATGTTCTTGTTAAATCGCGCGTTCGTGTGTTGTATCCCGCTACA
TATACGACTGTATGCCGTGAGTACCCCCTCCCTCCGTCCTCTCGAGGACG
CGTGGTCAACCGTCCAACAGCTGAGGCATGCAAATATGGGTACGCGCCCC
CCTTTCCCATGCACTGCGTGACTAACCACCCTCCCCGCTCTTGAACTTAC
GTTCACTCTCTGCAGCAAGAGCGACTTCGGTCCTCTAGCCGCGTACCAGG
ACCTCACGGCCTCGTTTCTGGCCAACAAGGGCGGCGCTAAGGGGTGCTTC
TGGAACCAAGACGTGGAGGCGTTGTGCCGGGGAGCAGGGCTGGAGGTGGT
GCGCTCGTCGCCCGCCCTTGCCGGCGGAGTGTTTCGCACTCTGGAGTGCG
CGCCTGCCAAGGTCAACGGCCGCAGCAGCGGCTGATGCACGCTGTTGTCT
ATAGCAGCCCGGGGTGTTGGCAGCGTGCTTCACACGTCAACTATGACTGT
CCTGAGGTGTCAATAGTTGGTTGTCTTTCGGTTTCCGGGTAGATACTTAG
GTTTACGAGGTTTGTATGCGTCTTTCGTTTGGTTTTGAAGTGTTCGTCGG
GGTTGATGCTTGCCAGTCTTGAAAATGTCCAACATTCGTCGCGCATACTT
CGCAGAATTTGTGCGTTGGGTTCTGGCTAGATGTTTGTTTTTTACTTTCC
GTTTTTTGTTCTTTGCTGTTTTGACGTCCCAGTATAGACCAATGATAAGT
ATAAGTATTGTCACCAGGAAAAACGAGATGGATTGTCACAAGTCGTCGTT
CACTTCTGAACGGTGGGATCCCGTTTGTGTTTCTTCTGAGGGCGATTTTT
GATTTTTGTGGAGGCCCTCCGATGATGTTGTGTTGAAGTATACGCGAACA
CTCACTGGTGCGTTTTATGATGGAGCTTCGAGATCACAACCGTGACGTAC
AATTCATCCAACATTCATTGGT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1209:12486..17857-

>mRNA_E-fasciculatus_F_contig1209.1631.1 ID=mRNA_E-fasciculatus_F_contig1209.1631.1|Name=mRNA_E-fasciculatus_F_contig1209.1631.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2154bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1209:12486..17857- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTGCTGGAAAAGATCGATGGACGTTTCTTGGTGGCTGATTTTTGCCGT
TATCAGTTCTTCCAGCATCGTCAGATGTGCTGGAAAAGATCGATGGACGT
TTCTTGGTGGCTGATTTTTGCCGTTATCAGTTCTTCCAGCATCGTCAGCG
GGGAGCAGACCCCCGCTTCTCCGTCTTCCCAGCACGGGATTCGCATCGAC
AGCCTCCGAGGAAGGCCACCACCACCCTCGCCCGATGCCACCGCGGCAAC
ATCAGCATTCAGTTCCTCACCAGCACCGGTATCGCCATCGCCATGGTCTT
CGCCGTCACGACAACAACGGCACTCGACGCTGTCATCAACACGAGAAGAG
GGCTGCGCTGGCTCCGCCAGCGCGCCAGCTGCCTTTCTCGAGCATTTTTC
TCCCGCCGCAGCCGCATCGGCCGCTGCAGCGAGCGTGGCGTCGGCTACCG
CCCGGGTACCGGTGCTGCAACAGCTTCCATCGAAGGCCGCGAACGCAACC
CGGGCCCTGTTGCCGCTGGCACCCTTCGTTGTCGAAGTCCCGGCGCTTGC
GGCGCACGCCCGCGCCGCTTGGCCGTGGGCGCGCTCCGCTGCGGCCACCG
CCGTCGCCGCCGCGTTATCCCGCCGCCCGTTCGCGTTTGTCCTCCCTCCC
ACCCAACCCCGACCCTACCGGCGATGGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCCAAGAGCGATAGCGAGAATACGGGAGG
AGCGAGAAGAACAAGCCTGCCGTGGACCCTCTCCGCTTGGCAGGCGCGGT
TATTTTAGCNNNNNNNNNNGAATCGACGGCGGTAGTAGCACGAACGACCG
GAGCGCTCTTGATCCGAGTAATCGGTCTCCCTCTTTCTTCCGTGACATCG
ACGTCGCGACGCCATCCTTAACGCGACGCGGGGCAATAGAGGAAACGCTT
GTCTCCGCGGCGCGGTGGTGGGCAGTGGCAGCGGTGGGACCGTCGGTGGC
GTTCGCGGATGCTGACGTGGGGGCAACAGGGGTTGGGGATCAGATGGGTT
CGAAGGCGTTCACGAAGGAATCCTACGACGGTTTCGCCGAGGGGTACGAT
GACCTGGACGGCGGTTGGGCGGCATCGGCCATCGGACTGGAGGCGAGTTA
GCGGGGAGCAGACCCCCGCTTCTCCGTCTTCCCAGCACGGGATTCGCATC
GACAGCCTCCGAGGAAGGCCACCACCACCCTCGCCCGATGCCACCGCGGC
AACATCAGCATTCAGTTCCTCACCAGCACCGGTATCGCCATCGCCATGGT
CTTCGCCGTCACGACAACAACGGCACTCGACGCTGTCATCAACACGAGAA
GAGGGCTGCGCTGGCTCCGCCAGCGCGCCAGCTGCCTTTCTCGAGCATTT
TTCTCCCGCCGCAGCCGCATCGGCCGCTGCAGCGAGCGTGGCGTCGGCTA
CCGCCCGGGTACCGGTGCTGCAACAGCTTCCATCGAAGGCCGCGAACGCA
ACCCGGGCCCTGTTGCCGCTGGCACCCTTCGTTGTCGAAGTCCCGGCGCT
TGCGGCGCACGCCCGCGCCGCTTGGCCGTGGGCGCGCTCCGCTGCGGCCA
CCGCCGTCGCCGCCGCGTTATCCCGCCGCCCGTTCGCGTTTGTCCTCCCT
CCCACCCAACCCCGACCCTACCGGCGATGGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCCAAGAGCGATAGCGAGAATACGGG
AGGAGCGAGAAGAACAAGCCTGCCGTGGACCCTCTCCGCTTGGCAGGCGC
GGTTATTTTAGCNNNNNNNNNNGAATCGACGGCGGTAGTAGCACGAACGA
CCGGAGCGCTCTTGATCCGAGTAATCGGTCTCCCTCTTTCTTCCGTGACA
TCGACGTCGCGACGCCATCCTTAACGCGACGCGGGGCAATAGAGGAAACG
CTTGTCTCCGCGGCGCGGTGGTGGGCAGTGGCAGCGGTGGGACCGTCGGT
GGCGTTCGCGGATGCTGACGTGGGGGCAACAGGGGTTGGGGATCAGATGG
GTTCGAAGGCGTTCACGAAGGAATCCTACGACGGTTTCGCCGAGGGGTAC
GATGACCTGGACGGCGGTTGGGCGGCATCGGCCATCGGACTGGAGGCGAG
TTAG
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